RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 ELMO3Q96BJ8 720 aa6.01□□□□□ -1.45
SPG11-222ENST00000560435 PCDHA4Q9UN74 947 aa6.01□□□□□ -1.45
SPG11-222ENST00000560435 CNTNAP4Q9C0A0 1308 aa6□□□□□ -1.45
SPG11-222ENST00000560435 PAGE1O75459 146 aa6□□□□□ -1.45
SPG11-222ENST00000560435 CTSWP56202 376 aa6□□□□□ -1.45
SPG11-222ENST00000560435 LRRC14Q15048 493 aa6□□□□□ -1.45
SPG11-222ENST00000560435 TPTE2Q6XPS3 522 aa6□□□□□ -1.45
SPG11-222ENST00000560435 MFSD2AQ8NA29 543 aa6□□□□□ -1.45
SPG11-222ENST00000560435 SLC26A8Q96RN1 970 aa6□□□□□ -1.45
SPG11-222ENST00000560435 MIPEPQ99797 713 aa6□□□□□ -1.45
SPG11-222ENST00000560435 KCNK12Q9HB15 430 aa6□□□□□ -1.45
SPG11-222ENST00000560435 SLAMF8Q9P0V8 285 aa6□□□□□ -1.45
SPG11-222ENST00000560435 PPM1HQ9ULR3 514 aa6□□□□□ -1.45
SPG11-222ENST00000560435 ETV2O00321 342 aaPredicted RBP5.99□□□□□ -1.45
SPG11-222ENST00000560435 SRFP11831 508 aa5.99□□□□□ -1.45
SPG11-222ENST00000560435 GSTT1P30711 240 aa5.99□□□□□ -1.45
SPG11-222ENST00000560435 SLBPQ14493 270 aaKnown RBP eCLIP5.99□□□□□ -1.45
SPG11-222ENST00000560435 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.99□□□□□ -1.45
SPG11-222ENST00000560435 ZNF746Q6NUN9 644 aaPredicted RBP5.99□□□□□ -1.45
SPG11-222ENST00000560435 TTC6Q86TZ1 520 aa5.99□□□□□ -1.45
SPG11-222ENST00000560435 TXNDC2Q86VQ3 553 aa5.99□□□□□ -1.45
SPG11-222ENST00000560435 COX4I2Q96KJ9 171 aa5.99□□□□□ -1.45
SPG11-222ENST00000560435 FBRSQ9HAH7 460 aa5.99□□□□□ -1.45
SPG11-222ENST00000560435 SMG5Q9UPR3 1016 aaKnown RBP5.99□□□□□ -1.45
SPG11-222ENST00000560435 LINC00310P59036 64 aa5.98□□□□□ -1.45
SPG11-222ENST00000560435 RASIP1Q5U651 963 aa5.98□□□□□ -1.45
SPG11-222ENST00000560435 ANKRD24Q8TF21 1146 aa5.98□□□□□ -1.45
SPG11-222ENST00000560435 UBE2FQ969M7 185 aa5.98□□□□□ -1.45
SPG11-222ENST00000560435 CYP8B1Q9UNU6 501 aa5.98□□□□□ -1.45
SPG11-222ENST00000560435 PRAMEF27A3QJZ7 478 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 NUAK1O60285 661 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 HPXP02790 462 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 HOXA5P20719 270 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 LETMD1Q6P1Q0 360 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 LRFN4Q6PJG9 635 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 TMC7Q7Z402 723 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 MYLIPQ8WY64 445 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 SRCIN1Q9C0H9 1055 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 WNT10AQ9GZT5 417 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 ZSWIM5Q9P217 1185 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 TMEM59LQ9UK28 342 aa5.97□□□□□ -1.45
SPG11-222ENST00000560435 DNAJC25-GNG10A0A024R161 153 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 PNMA6FA0A0J9YX94 578 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 CBX7O95931 251 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 KIR3DL1P43629 444 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 INPP5AQ14642 412 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 ENOX2Q16206 610 aaKnown RBP5.96□□□□□ -1.46
SPG11-222ENST00000560435 NKG7Q16617 165 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 RALGPS1Q5JS13 557 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 TMPRSS7Q7RTY8 843 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 HDXQ7Z353 690 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 KCNN1Q92952 543 aa5.96□□□□□ -1.46
SPG11-222ENST00000560435 FBXO24O75426 580 aa5.95□□□□□ -1.46
SPG11-222ENST00000560435 ESR1P03372 595 aa5.95□□□□□ -1.46
SPG11-222ENST00000560435 CYP7A1P22680 504 aa5.95□□□□□ -1.46
SPG11-222ENST00000560435 ERVFC1P60507 584 aa5.95□□□□□ -1.46
SPG11-222ENST00000560435 TNK2Q07912 1038 aa5.95□□□□□ -1.46
SPG11-222ENST00000560435 DSC3Q14574 896 aa5.95□□□□□ -1.46
SPG11-222ENST00000560435 RIN3Q8TB24 985 aa5.95□□□□□ -1.46
SPG11-222ENST00000560435 PLPPR2Q96GM1 343 aa5.95□□□□□ -1.46
SPG11-222ENST00000560435 C20orf173Q96LM9 149 aa5.95□□□□□ -1.46
SPG11-222ENST00000560435 CST3P01034 146 aaPredicted RBP5.94□□□□□ -1.46
SPG11-222ENST00000560435 HK2P52789 917 aa5.94□□□□□ -1.46
SPG11-222ENST00000560435 PCNX4Q63HM2 1172 aa5.94□□□□□ -1.46
SPG11-222ENST00000560435 HID1Q8IV36 788 aa5.94□□□□□ -1.46
SPG11-222ENST00000560435 PIWIL2Q8TC59 973 aaKnown RBP5.94□□□□□ -1.46
SPG11-222ENST00000560435 SNCAIPQ9Y6H5 919 aa5.94□□□□□ -1.46
SPG11-222ENST00000560435 ETF1P62495 437 aaKnown RBP5.93□□□□□ -1.46
SPG11-222ENST00000560435 PTPN11Q06124 597 aaPredicted RBP5.93□□□□□ -1.46
SPG11-222ENST00000560435 PRAMEF13Q5VWM6 474 aa5.93□□□□□ -1.46
SPG11-222ENST00000560435 FBF1Q8TES7 1133 aa5.93□□□□□ -1.46
SPG11-222ENST00000560435 RELTQ969Z4 430 aa5.93□□□□□ -1.46
SPG11-222ENST00000560435 IRF2BPLQ9H1B7 796 aa5.93□□□□□ -1.46
SPG11-222ENST00000560435 C1orf115Q9H7X2 142 aa5.93□□□□□ -1.46
SPG11-222ENST00000560435 PARD6AQ9NPB6 346 aa5.93□□□□□ -1.46
SPG11-222ENST00000560435 DCTN4Q9UJW0 460 aa5.93□□□□□ -1.46
SPG11-222ENST00000560435 TREHO43280 583 aa5.92□□□□□ -1.46
SPG11-222ENST00000560435 PLCB3Q01970 1234 aa5.92□□□□□ -1.46
SPG11-222ENST00000560435 IRF2BP1Q8IU81 584 aa5.92□□□□□ -1.46
SPG11-222ENST00000560435 GAL3ST3Q96A11 431 aa5.92□□□□□ -1.46
SPG11-222ENST00000560435 RNF32Q9H0A6 362 aa5.92□□□□□ -1.46
SPG11-222ENST00000560435 JAG2Q9Y219 1238 aa5.92□□□□□ -1.46
SPG11-222ENST00000560435 GIPC1O14908 333 aa5.91□□□□□ -1.46
SPG11-222ENST00000560435 CELA3AP09093 270 aa5.91□□□□□ -1.46
SPG11-222ENST00000560435 WIPI1Q5MNZ9 446 aaPredicted RBP5.91□□□□□ -1.46
SPG11-222ENST00000560435 CREG2Q8IUH2 290 aa5.91□□□□□ -1.46
SPG11-222ENST00000560435 OSBPL7Q9BZF2 842 aa5.91□□□□□ -1.46
SPG11-222ENST00000560435 ADAMTS10Q9H324 1103 aa5.91□□□□□ -1.46
SPG11-222ENST00000560435 SP110Q9HB58 689 aa5.91□□□□□ -1.46
SPG11-222ENST00000560435 SOWAHDA6NJG2 315 aa5.9□□□□□ -1.46
SPG11-222ENST00000560435 SEMA7AO75326 666 aa5.9□□□□□ -1.46
SPG11-222ENST00000560435 GAB4Q2WGN9 574 aa5.9□□□□□ -1.46
SPG11-222ENST00000560435 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.9□□□□□ -1.46
SPG11-222ENST00000560435 CDH24Q86UP0 819 aa5.9□□□□□ -1.46
SPG11-222ENST00000560435 LILRA2Q8N149 483 aa5.9□□□□□ -1.46
SPG11-222ENST00000560435 PDZD8Q8NEN9 1154 aa5.9□□□□□ -1.46
SPG11-222ENST00000560435 BAHD1Q8TBE0 780 aaPredicted RBP5.9□□□□□ -1.46
SPG11-222ENST00000560435 XAGE3Q8WTP9 111 aa5.9□□□□□ -1.46
SPG11-222ENST00000560435 MCOLN1Q9GZU1 580 aa5.9□□□□□ -1.46
SPG11-222ENST00000560435 SLC6A17Q9H1V8 727 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms