RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 RASAL3Q86YV0 1011 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 ZNF444Q8N0Y2 327 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 WNK4Q96J92 1243 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 SH2D4AQ9H788 454 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 EPB41L4AQ9HCS5 686 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 SNCAIPQ9Y6H5 919 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 PTPRFP10586 1907 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 ALDH1A1P00352 501 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 INPP5BP32019 993 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 SHMT1P34896 483 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 MAP2K1Q02750 393 aaPredicted RBP14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 SNAPC2Q13487 334 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 RNF20Q5VTR2 975 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 MOB2Q70IA6 237 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 MAP4K1Q92918 833 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 OPTNQ96CV9 577 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 WDR18Q9BV38 432 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 CNNM2Q9H8M5 875 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 ELP3Q9H9T3 547 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 SYNPO2Q9UMS6 1093 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
RABGGTA-215ENST00000560207 FAM155AB1AL88 458 aaPredicted RBP14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 CA12O43570 354 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 ORC4O43929 436 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 FGRP09769 529 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 CETPP11597 493 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 PTPRAP18433 802 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 VEGFBP49765 207 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 VPS53Q5VIR6 699 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 CYP4F22Q6NT55 531 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 FASTKD5Q7L8L6 764 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 DNAJC5GQ8N7S2 189 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 DNAJC18Q9H819 358 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 ZBTB21Q9ULJ3 1066 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 KCNH4Q9UQ05 1017 aa14.3□□□□□ -0.12
RABGGTA-215ENST00000560207 GREB1LQ9C091 1923 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 FOXP2O15409 715 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 TM4SF4P48230 202 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 USP14P54578 494 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 TRDNQ13061 729 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 ZNF280CQ8ND82 737 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 CLMNQ96JQ2 1002 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 BEGAINQ9BUH8 593 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 KRT23Q9C075 422 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 KANSL2Q9H9L4 492 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 ZHX2Q9Y6X8 837 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 MYH4Q9Y623 1939 aa14.29□□□□□ -0.12
RABGGTA-215ENST00000560207 TESPA1A2RU30 521 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 CYP2D6P10635 497 aa14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 PABPC4Q13310 644 aaKnown RBP eCLIP14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 JMYQ8N9B5 988 aa14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 STAG1Q8WVM7 1258 aa14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 ESR2Q92731 530 aa14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 ARHGEF10LQ9HCE6 1279 aa14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 ANO2Q9NQ90 1003 aa14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 FZD1Q9UP38 647 aa14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 AFG3L2Q9Y4W6 797 aa14.28□□□□□ -0.12
RABGGTA-215ENST00000560207 PLIN4Q96Q06 1357 aa14.27□□□□□ -0.12
RABGGTA-215ENST00000560207 FAM196BA6NMK8 535 aa14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 USP17L10C9JJH3 530 aa14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 GH2P01242 217 aa14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 TSPY3P0CV98 308 aa14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 TSPY8P0CW00 308 aa14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 SLC4A8Q2Y0W8 1093 aa14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 SKAP1Q86WV1 359 aa14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 PROCA1Q8NCQ7 364 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 DYNLL2Q96FJ2 89 aa14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 SLC45A1Q9Y2W3 748 aa14.27□□□□□ -0.13
RABGGTA-215ENST00000560207 CYP2D7A0A087X1C5 515 aa14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 IRF6O14896 467 aa14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 ZKSCAN1P17029 563 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 RASA1P20936 1047 aa14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 BACE1P56817 501 aa14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 KIF23Q02241 960 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 SH3D19Q5HYK7 790 aa14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 NEDD1Q8NHV4 660 aa14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 SAGE1Q9NXZ1 904 aa14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 LOC285556D6RIA3 1793 aa14.26□□□□□ -0.13
RABGGTA-215ENST00000560207 A0A0G2JLL6 359 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 TSPY2A6NKD2 308 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 GDF11O95390 407 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 MCCP23508 829 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 HTRA3P83110 453 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 GRM1Q13255 1194 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 KRT32Q14532 448 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 PRRT2Q7Z6L0 340 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 IQCA1Q86XH1 822 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 LPAR1Q92633 364 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 TTC14Q96N46 770 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 MTA3Q9BTC8 594 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms