RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 METTL16Q86W50 562 aaKnown RBP24.43■■□□□ 1.5
RABGGTA-214ENST00000560163 MEIS3Q99687 375 aa24.43■■□□□ 1.5
RABGGTA-214ENST00000560163 CCND3P30281 292 aaPredicted RBP24.42■■□□□ 1.5
RABGGTA-214ENST00000560163 MAPK4P31152 587 aa24.42■■□□□ 1.5
RABGGTA-214ENST00000560163 CCL14Q16627 93 aa24.42■■□□□ 1.5
RABGGTA-214ENST00000560163 TEX11Q8IYF3 940 aa24.42■■□□□ 1.5
RABGGTA-214ENST00000560163 C19orf81C9J6K1 198 aa24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 ASNSP08243 561 aa24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 ARID4AP29374 1257 aaPredicted RBP24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 SH3RF3Q8TEJ3 882 aaPredicted RBP24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 PORCNQ9H237 461 aa24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 DHX36Q9H2U1 1008 aaKnown RBP24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 DNAJC18Q9H819 358 aa24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 TMOD4Q9NZQ9 345 aa24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 NOB1Q9ULX3 412 aaKnown RBP24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 SPTBN5Q9NRC6 3674 aaKnown RBP24.41■■□□□ 1.5
RABGGTA-214ENST00000560163 ZKSCAN1P17029 563 aaPredicted RBP24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 ERVK-9P63128 1117 aa24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 ERVK-24P63145 666 aa24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 MDM2Q00987 491 aaPredicted RBP24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 MTX1Q13505 466 aa24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 SHROOM1Q2M3G4 852 aaPredicted RBP24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 GPR142Q7Z601 462 aa24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 NEUROD6Q96NK8 337 aa24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 RAI14Q9P0K7 980 aa24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 PRUNE2Q8WUY3 3088 aa24.4■■□□□ 1.5
RABGGTA-214ENST00000560163 USP17L10C9JJH3 530 aa24.39■■□□□ 1.49
RABGGTA-214ENST00000560163 GUCD1Q96NT3 240 aa24.39■■□□□ 1.49
RABGGTA-214ENST00000560163 SRGAP3O43295 1099 aa24.38■■□□□ 1.49
RABGGTA-214ENST00000560163 RGS2P41220 211 aa24.38■■□□□ 1.49
RABGGTA-214ENST00000560163 MCAMP43121 646 aa24.38■■□□□ 1.49
RABGGTA-214ENST00000560163 PDE3AQ14432 1141 aa24.38■■□□□ 1.49
RABGGTA-214ENST00000560163 FOXP4Q8IVH2 680 aaPredicted RBP24.38■■□□□ 1.49
RABGGTA-214ENST00000560163 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.38■■□□□ 1.49
RABGGTA-214ENST00000560163 TRMT2AQ8IZ69 625 aaKnown RBP24.38■■□□□ 1.49
RABGGTA-214ENST00000560163 PPP4CP60510 307 aa24.37■■□□□ 1.49
RABGGTA-214ENST00000560163 PLEKHH3Q7Z736 793 aa24.37■■□□□ 1.49
RABGGTA-214ENST00000560163 CDCA7LQ96GN5 454 aa24.37■■□□□ 1.49
RABGGTA-214ENST00000560163 APBA2Q99767 749 aa24.37■■□□□ 1.49
RABGGTA-214ENST00000560163 API5Q9BZZ5 524 aaKnown RBP24.37■■□□□ 1.49
RABGGTA-214ENST00000560163 EMILIN3Q9NT22 766 aa24.37■■□□□ 1.49
RABGGTA-214ENST00000560163 GINM1Q9NU53 330 aa24.37■■□□□ 1.49
RABGGTA-214ENST00000560163 FRMPD3Q5JV73 1810 aa24.36■■□□□ 1.49
RABGGTA-214ENST00000560163 CDK5RAP2Q96SN8 1893 aa24.36■■□□□ 1.49
RABGGTA-214ENST00000560163 GTF3C2Q8WUA4 911 aaPredicted RBP24.35■■□□□ 1.49
RABGGTA-214ENST00000560163 AATFQ9NY61 560 aaKnown RBP eCLIP24.35■■□□□ 1.49
RABGGTA-214ENST00000560163 LRP2BPQ9P2M1 347 aa24.35■■□□□ 1.49
RABGGTA-214ENST00000560163 FOCADQ5VW36 1801 aa24.34■■□□□ 1.49
RABGGTA-214ENST00000560163 GORABQ5T7V8 394 aa24.34■■□□□ 1.49
RABGGTA-214ENST00000560163 TGFBRAP1Q8WUH2 860 aa24.34■■□□□ 1.49
RABGGTA-214ENST00000560163 FLRT1Q9NZU1 646 aa24.34■■□□□ 1.49
RABGGTA-214ENST00000560163 ZBTB21Q9ULJ3 1066 aa24.34■■□□□ 1.49
RABGGTA-214ENST00000560163 MAST2Q6P0Q8 1798 aa24.34■■□□□ 1.49
RABGGTA-214ENST00000560163 FLT1P17948 1338 aa24.34■■□□□ 1.49
RABGGTA-214ENST00000560163 CNMDO75829 334 aa24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 GDF11O95390 407 aa24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 BAG3O95817 575 aa24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 MAP2K5Q13163 448 aa24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 ADGRA1Q86SQ6 560 aa24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 MAPKAPK5Q8IW41 473 aa24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 EDC3Q96F86 508 aaKnown RBP24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 PAGR1Q9BTK6 254 aa24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 SENP6Q9GZR1 1112 aaPredicted RBP24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 PALD1Q9ULE6 856 aa24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 CDH23Q9H251 3354 aa24.33■■□□□ 1.49
RABGGTA-214ENST00000560163 GNAI3P08754 354 aa24.32■■□□□ 1.48
RABGGTA-214ENST00000560163 CT47B1P0C2W7 299 aaPredicted RBP24.32■■□□□ 1.48
RABGGTA-214ENST00000560163 UQCRFS1P1P0C7P4 283 aa24.32■■□□□ 1.48
RABGGTA-214ENST00000560163 PLCG2P16885 1265 aa24.32■■□□□ 1.48
RABGGTA-214ENST00000560163 CCAR1Q8IX12 1150 aaKnown RBP24.32■■□□□ 1.48
RABGGTA-214ENST00000560163 RABGAP1Q9Y3P9 1069 aa24.32■■□□□ 1.48
RABGGTA-214ENST00000560163 IGHA2P01877 340 aa24.31■■□□□ 1.48
RABGGTA-214ENST00000560163 NAA16Q6N069 864 aaPredicted RBP24.31■■□□□ 1.48
RABGGTA-214ENST00000560163 USP17L2Q6R6M4 530 aa24.31■■□□□ 1.48
RABGGTA-214ENST00000560163 C12orf42Q96LP6 360 aa24.31■■□□□ 1.48
RABGGTA-214ENST00000560163 NOL10Q9BSC4 688 aaKnown RBP24.31■■□□□ 1.48
RABGGTA-214ENST00000560163 CRACR2BQ8N4Y2 399 aaPredicted RBP24.3■■□□□ 1.48
RABGGTA-214ENST00000560163 FAM161BQ96MY7 647 aa24.3■■□□□ 1.48
RABGGTA-214ENST00000560163 HOXC6P09630 235 aa24.29■■□□□ 1.48
RABGGTA-214ENST00000560163 LPAR1Q92633 364 aa24.29■■□□□ 1.48
RABGGTA-214ENST00000560163 LBHD1Q9BQE6 289 aaPredicted RBP24.29■■□□□ 1.48
RABGGTA-214ENST00000560163 DDX20Q9UHI6 824 aaKnown RBP24.29■■□□□ 1.48
RABGGTA-214ENST00000560163 SLC15A5A6NIM6 579 aa24.28■■□□□ 1.48
RABGGTA-214ENST00000560163 PTPREP23469 700 aa24.28■■□□□ 1.48
RABGGTA-214ENST00000560163 MFSD14CQ5VZR4 134 aa24.28■■□□□ 1.48
RABGGTA-214ENST00000560163 ARHGAP45Q92619 1136 aa24.28■■□□□ 1.48
RABGGTA-214ENST00000560163 SNRKQ9NRH2 765 aa24.28■■□□□ 1.48
RABGGTA-214ENST00000560163 LTBP2Q14767 1821 aa24.28■■□□□ 1.48
RABGGTA-214ENST00000560163 USP17L15C9J2P7 530 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 USP17L13C9JLJ4 530 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 USP17L11C9JVI0 530 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 USP17L18D6R9N7 530 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 USP17L22D6RA61 530 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 USP17L17D6RBQ6 530 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 USP17L19D6RCP7 530 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 USP17L20D6RJB6 530 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 MSCO60682 206 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 GLRX3O76003 335 aaKnown RBP24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 CYP2E1P05181 493 aaPredicted RBP24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 CCNA1P78396 465 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms