RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TNFAIP1Q13829 316 aa14.33□□□□□ -0.12
HERC1-205ENST00000559886 SEC23AQ15436 765 aa14.33□□□□□ -0.12
HERC1-205ENST00000559886 CSRNP1Q96S65 589 aa14.33□□□□□ -0.12
HERC1-205ENST00000559886 DNAJC18Q9H819 358 aa14.33□□□□□ -0.12
HERC1-205ENST00000559886 ADARB2Q9NS39 739 aaKnown RBP14.33□□□□□ -0.12
HERC1-205ENST00000559886 PGAP2Q9UHJ9 254 aa14.33□□□□□ -0.12
HERC1-205ENST00000559886 HACL1Q9UJ83 578 aa14.33□□□□□ -0.12
HERC1-205ENST00000559886 ASTN2O75129 1339 aaPredicted RBP14.33□□□□□ -0.12
HERC1-205ENST00000559886 SCN4AP35499 1836 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 ERICH2A1L162 156 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 SHMT1P34896 483 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 HIRAP54198 1017 aaPredicted RBP14.32□□□□□ -0.12
HERC1-205ENST00000559886 TMTC2Q8N394 836 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 CRACR2BQ8N4Y2 399 aaPredicted RBP14.32□□□□□ -0.12
HERC1-205ENST00000559886 SPRYD3Q8NCJ5 442 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 INTS4Q96HW7 963 aaKnown RBP14.32□□□□□ -0.12
HERC1-205ENST00000559886 TMEM39BQ9GZU3 492 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 SENP2Q9HC62 589 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 BRPF3Q9ULD4 1205 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 TNKSO95271 1327 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 TSPY3P0CV98 308 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 TSPY8P0CW00 308 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 WTAPQ15007 396 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 ENAHQ8N8S7 591 aaPredicted RBP14.32□□□□□ -0.12
HERC1-205ENST00000559886 TCP11L1Q9NUJ3 509 aa14.32□□□□□ -0.12
HERC1-205ENST00000559886 GREB1LQ9C091 1923 aaPredicted RBP14.31□□□□□ -0.12
HERC1-205ENST00000559886 KLF18A0A0U1RQI7 1052 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 PDIA3P30101 505 aaKnown RBP14.31□□□□□ -0.12
HERC1-205ENST00000559886 RASA3Q14644 834 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 NEDD1Q8NHV4 660 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 PLIN4Q96Q06 1357 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 NMT2O60551 498 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 PFKFB2O60825 505 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 SLURP2P0DP57 97 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 ST3GAL1Q11201 340 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 NECAB1Q8N987 351 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 IL17RBQ9NRM6 502 aa14.31□□□□□ -0.12
HERC1-205ENST00000559886 HERC5Q9UII4 1024 aaKnown RBP14.31□□□□□ -0.12
HERC1-205ENST00000559886 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 ANGEL2Q5VTE6 544 aaKnown RBP14.3□□□□□ -0.12
HERC1-205ENST00000559886 TATDN1Q6P1N9 297 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 APOBEC3FQ8IUX4 373 aaKnown RBP14.3□□□□□ -0.12
HERC1-205ENST00000559886 GTF3C6Q969F1 213 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 TRIM34Q9BYJ4 488 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 SLKQ9H2G2 1235 aaPredicted RBP14.3□□□□□ -0.12
HERC1-205ENST00000559886 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 WDR90Q96KV7 1748 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 STK3Q13188 491 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 RCSD1Q6JBY9 416 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 APOA5Q6Q788 366 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 NFXL1Q6ZNB6 911 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 CCDC83Q8IWF9 413 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 ANKS1AQ92625 1134 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 CCDC17Q96LX7 622 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 TEPSINQ96N21 525 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 HPS5Q9UPZ3 1129 aa14.3□□□□□ -0.12
HERC1-205ENST00000559886 CCDC69A6NI79 296 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 FAM196BA6NMK8 535 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 TBC1D12O60347 775 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 IFIT1BQ5T764 474 aaKnown RBP14.29□□□□□ -0.12
HERC1-205ENST00000559886 DGKHQ86XP1 1220 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.29□□□□□ -0.12
HERC1-205ENST00000559886 DEFB129Q9H1M3 183 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 GGA3Q9NZ52 723 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 NAP1L2Q9ULW6 460 aaPredicted RBP14.29□□□□□ -0.12
HERC1-205ENST00000559886 SCAF8Q9UPN6 1271 aaKnown RBP14.29□□□□□ -0.12
HERC1-205ENST00000559886 PITPNM2Q9BZ72 1349 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 GOLGA8BA8MQT2 603 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 AKR1B1P15121 316 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 MAP3K10Q02779 954 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 SCRN1Q12765 414 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 SLC12A7Q9Y666 1083 aa14.29□□□□□ -0.12
HERC1-205ENST00000559886 CERKLQ49MI3 558 aaPredicted RBP14.28□□□□□ -0.12
HERC1-205ENST00000559886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.28□□□□□ -0.12
HERC1-205ENST00000559886 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.28□□□□□ -0.12
HERC1-205ENST00000559886 IGKV6D-41A0A0C4DH26 115 aa14.27□□□□□ -0.12
HERC1-205ENST00000559886 ZBTB43O43298 467 aa14.27□□□□□ -0.12
HERC1-205ENST00000559886 DDIT3P35638 169 aa14.27□□□□□ -0.12
HERC1-205ENST00000559886 NOVP48745 357 aa14.27□□□□□ -0.12
HERC1-205ENST00000559886 RCAN1P53805 252 aa14.27□□□□□ -0.12
HERC1-205ENST00000559886 USP50Q70EL3 339 aaPredicted RBP14.27□□□□□ -0.12
HERC1-205ENST00000559886 CHMP4CQ96CF2 233 aa14.27□□□□□ -0.12
HERC1-205ENST00000559886 CWC22Q9HCG8 908 aaKnown RBP14.27□□□□□ -0.12
HERC1-205ENST00000559886 EPHX2P34913 555 aa14.27□□□□□ -0.13
HERC1-205ENST00000559886 CCT2P78371 535 aaKnown RBP14.27□□□□□ -0.13
HERC1-205ENST00000559886 SYNE3Q6ZMZ3 975 aa14.27□□□□□ -0.13
HERC1-205ENST00000559886 ZNF654Q8IZM8 581 aa14.27□□□□□ -0.13
HERC1-205ENST00000559886 CEP95Q96GE4 821 aa14.27□□□□□ -0.13
HERC1-205ENST00000559886 MYH4Q9Y623 1939 aa14.27□□□□□ -0.13
HERC1-205ENST00000559886 NID2Q14112 1375 aa14.27□□□□□ -0.13
HERC1-205ENST00000559886 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
HERC1-205ENST00000559886 DCAF8L1A6NGE4 600 aa14.26□□□□□ -0.13
HERC1-205ENST00000559886 NCOA5Q9HCD5 579 aaKnown RBP14.26□□□□□ -0.13
HERC1-205ENST00000559886 PPP2R3BQ9Y5P8 575 aa14.26□□□□□ -0.13
HERC1-205ENST00000559886 POTECB2RU33 542 aa14.26□□□□□ -0.13
HERC1-205ENST00000559886 METAP2P50579 478 aaKnown RBP eCLIP14.26□□□□□ -0.13
HERC1-205ENST00000559886 CATIPQ7Z7H3 387 aa14.26□□□□□ -0.13
HERC1-205ENST00000559886 MICU3Q86XE3 530 aa14.26□□□□□ -0.13
HERC1-205ENST00000559886 LLPHQ9BRT6 129 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms