RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 AMOTL1Q8IY63 956 aa16.77■□□□□ 0.28
RABGGTA-209ENST00000559551 SMARCC2Q8TAQ2 1214 aa16.77■□□□□ 0.28
RABGGTA-209ENST00000559551 MYOZ2Q9NPC6 264 aa16.77■□□□□ 0.28
RABGGTA-209ENST00000559551 SMC3Q9UQE7 1217 aa16.77■□□□□ 0.28
RABGGTA-209ENST00000559551 BAZ2BQ9UIF8 2168 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-209ENST00000559551 PPFIA3O75145 1194 aa16.77■□□□□ 0.27
RABGGTA-209ENST00000559551 SHMT1P34896 483 aa16.77■□□□□ 0.27
RABGGTA-209ENST00000559551 TTC6Q86TZ1 520 aa16.77■□□□□ 0.27
RABGGTA-209ENST00000559551 UBAC1Q9BSL1 405 aa16.77■□□□□ 0.27
RABGGTA-209ENST00000559551 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.77■□□□□ 0.27
RABGGTA-209ENST00000559551 ATRNL1Q5VV63 1379 aa16.77■□□□□ 0.27
RABGGTA-209ENST00000559551 MYH4Q9Y623 1939 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 COL2A1P02458 1487 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 NID2Q14112 1375 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 FAM196BA6NMK8 535 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 RPS12P25398 132 aaKnown RBP16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 MICALL2Q8IY33 904 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 MKNK2Q9HBH9 465 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 ASTN2O75129 1339 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 TSPY2A6NKD2 308 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 TCP10L2B9ZVM9 353 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 ENTPD3O75355 529 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 SAMD7Q7Z3H4 446 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 MICU3Q86XE3 530 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 CCDC144CPQ8IYA2 1237 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 DPF2Q92785 391 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 TNPO1Q92973 898 aaKnown RBP16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
RABGGTA-209ENST00000559551 FDPSP14324 419 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-209ENST00000559551 ADD1P35611 737 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-209ENST00000559551 NFXL1Q6ZNB6 911 aa16.75■□□□□ 0.27
RABGGTA-209ENST00000559551 EHD4Q9H223 541 aa16.75■□□□□ 0.27
RABGGTA-209ENST00000559551 PGAP2Q9UHJ9 254 aa16.75■□□□□ 0.27
RABGGTA-209ENST00000559551 CNOT7Q9UIV1 285 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-209ENST00000559551 SCAF8Q9UPN6 1271 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-209ENST00000559551 BRD1O95696 1058 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 SYT1P21579 422 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 SART3Q15020 963 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 NFKBIBQ15653 356 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 NTRK3Q16288 839 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 SHROOM1Q2M3G4 852 aaPredicted RBP16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 IQCA1Q86XH1 822 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 ZNF654Q8IZM8 581 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 DDX11Q96FC9 970 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 PTPDC1A2A3K4 754 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 CCDC69A6NI79 296 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 ZBTB43O43298 467 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 AKR1B1P15121 316 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 METTL16Q86W50 562 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 ZNF444Q8N0Y2 327 aaPredicted RBP16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 NEDD1Q8NHV4 660 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 CHAMP1Q96JM3 812 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 TCP11L1Q9NUJ3 509 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
RABGGTA-209ENST00000559551 ERICH2A1L162 156 aa16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 METAP2P50579 478 aaKnown RBP eCLIP16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 TROAPQ12815 778 aa16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 TBC1D10BQ4KMP7 808 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 RBM26Q5T8P6 1007 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 ANKS1AQ92625 1134 aa16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 DHX36Q9H2U1 1008 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 RNF181Q9P0P0 153 aa16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 TSPY3P0CV98 308 aa16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 TSPY8P0CW00 308 aa16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 NOVP48745 357 aa16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 RRP1BQ14684 758 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 IFIT1BQ5T764 474 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 CLEC10AQ8IUN9 316 aa16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-209ENST00000559551 IGKV6D-41A0A0C4DH26 115 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 GOLGA8AA7E2F4 631 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 UBE2Q2LH0YL09 131 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 HLA-DOAP06340 250 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 NUCB2P80303 420 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 GPC2Q8N158 579 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 FAM151AQ8WW52 585 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 VEZTQ9HBM0 779 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 PI4KBQ9UBF8 816 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 MTMR6Q9Y217 621 aa16.72■□□□□ 0.27
RABGGTA-209ENST00000559551 DDNO94850 711 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 JAG1P78504 1218 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 FKBP1CQ5VVH2 108 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 ZSCAN29Q8IWY8 852 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 TRPM4Q8TD43 1214 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 TMEM39BQ9GZU3 492 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 RTN4Q9NQC3 1192 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 GPRC5DQ9NZD1 345 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 SWAP70Q9UH65 585 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 MYH15Q9Y2K3 1946 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 STX6O43752 255 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 NT5C2P49902 561 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 RASGRP2Q7LDG7 609 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 DGKHQ86XP1 1220 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 CEP95Q96GE4 821 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms