RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MAP2K1Q02750 393 aaPredicted RBP24.23■■□□□ 1.47
TSPAN3-207ENST00000559494 CERKLQ49MI3 558 aaPredicted RBP24.23■■□□□ 1.47
TSPAN3-207ENST00000559494 C16orf86Q6ZW13 317 aa24.23■■□□□ 1.47
TSPAN3-207ENST00000559494 WBP1LQ9NX94 342 aa24.23■■□□□ 1.47
TSPAN3-207ENST00000559494 SWAP70Q9UH65 585 aa24.23■■□□□ 1.47
TSPAN3-207ENST00000559494 DOCK1Q14185 1865 aa24.22■■□□□ 1.47
TSPAN3-207ENST00000559494 MANSC4A6NHS7 340 aaPredicted RBP24.22■■□□□ 1.47
TSPAN3-207ENST00000559494 FGAP02671 866 aa24.22■■□□□ 1.47
TSPAN3-207ENST00000559494 REM2Q8IYK8 340 aaPredicted RBP24.22■■□□□ 1.47
TSPAN3-207ENST00000559494 TAOK2Q9UL54 1235 aa24.22■■□□□ 1.47
TSPAN3-207ENST00000559494 ASNSP08243 561 aa24.21■■□□□ 1.47
TSPAN3-207ENST00000559494 STK11IPQ8N1F8 1099 aa24.21■■□□□ 1.47
TSPAN3-207ENST00000559494 KCNH4Q9UQ05 1017 aa24.21■■□□□ 1.47
TSPAN3-207ENST00000559494 AFG3L2Q9Y4W6 797 aa24.21■■□□□ 1.47
TSPAN3-207ENST00000559494 ATAD5Q96QE3 1844 aa24.2■■□□□ 1.46
TSPAN3-207ENST00000559494 TESPA1A2RU30 521 aaPredicted RBP24.2■■□□□ 1.46
TSPAN3-207ENST00000559494 GH2P01242 217 aa24.2■■□□□ 1.46
TSPAN3-207ENST00000559494 GTF2A2P52657 109 aa24.2■■□□□ 1.46
TSPAN3-207ENST00000559494 RUFY2Q8WXA3 655 aa24.2■■□□□ 1.46
TSPAN3-207ENST00000559494 GINM1Q9NU53 330 aa24.2■■□□□ 1.46
TSPAN3-207ENST00000559494 ZBTB21Q9ULJ3 1066 aa24.2■■□□□ 1.46
TSPAN3-207ENST00000559494 USP17L5A8MUK1 530 aa24.19■■□□□ 1.46
TSPAN3-207ENST00000559494 INHBEP58166 350 aa24.19■■□□□ 1.46
TSPAN3-207ENST00000559494 PPARAQ07869 468 aa24.19■■□□□ 1.46
TSPAN3-207ENST00000559494 ABCB5Q2M3G0 1257 aa24.19■■□□□ 1.46
TSPAN3-207ENST00000559494 BRI3BPQ8WY22 251 aa24.19■■□□□ 1.46
TSPAN3-207ENST00000559494 PTPN18Q99952 460 aa24.19■■□□□ 1.46
TSPAN3-207ENST00000559494 PHIPQ8WWQ0 1821 aa24.19■■□□□ 1.46
TSPAN3-207ENST00000559494 CXCL11O14625 94 aa24.18■■□□□ 1.46
TSPAN3-207ENST00000559494 SGSM2O43147 1006 aa24.18■■□□□ 1.46
TSPAN3-207ENST00000559494 GUCY1A2P33402 732 aa24.18■■□□□ 1.46
TSPAN3-207ENST00000559494 SREBF2Q12772 1141 aa24.18■■□□□ 1.46
TSPAN3-207ENST00000559494 SNAPC2Q13487 334 aa24.18■■□□□ 1.46
TSPAN3-207ENST00000559494 ROBO3Q96MS0 1386 aa24.18■■□□□ 1.46
TSPAN3-207ENST00000559494 RAD50Q92878 1312 aa24.18■■□□□ 1.46
TSPAN3-207ENST00000559494 HSPA1AP0DMV8 641 aaKnown RBP24.17■■□□□ 1.46
TSPAN3-207ENST00000559494 HSPA1BP0DMV9 641 aaKnown RBP24.17■■□□□ 1.46
TSPAN3-207ENST00000559494 SPP2Q13103 211 aa24.17■■□□□ 1.46
TSPAN3-207ENST00000559494 DSCC1Q9BVC3 393 aa24.17■■□□□ 1.46
TSPAN3-207ENST00000559494 CCL15-CCL14A0A0B4J2E2 113 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 IGF2BP3O00425 579 aaKnown RBP eCLIP24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 CETPP11597 493 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 AKR1B1P15121 316 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 CTDSPL2Q05D32 466 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 CCL15Q16663 113 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 IFNL1Q8IU54 200 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 ZNF280CQ8ND82 737 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 CCDC17Q96LX7 622 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 WDR18Q9BV38 432 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 CABP5Q9NP86 173 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 RNF186Q9NXI6 227 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 ANAPC4Q9UJX5 808 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 TACC3Q9Y6A5 838 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 LAMB1P07942 1786 aa24.16■■□□□ 1.46
TSPAN3-207ENST00000559494 TRIM75PA6NK02 468 aa24.15■■□□□ 1.46
TSPAN3-207ENST00000559494 RASA1P20936 1047 aa24.15■■□□□ 1.46
TSPAN3-207ENST00000559494 MOGSQ13724 837 aa24.15■■□□□ 1.46
TSPAN3-207ENST00000559494 SEPT2Q15019 361 aa24.15■■□□□ 1.46
TSPAN3-207ENST00000559494 TBC1D2Q9BYX2 928 aa24.15■■□□□ 1.46
TSPAN3-207ENST00000559494 MKNK2Q9HBH9 465 aa24.15■■□□□ 1.46
TSPAN3-207ENST00000559494 INCENPQ9NQS7 918 aa24.15■■□□□ 1.46
TSPAN3-207ENST00000559494 MYH8P13535 1937 aa24.15■■□□□ 1.46
TSPAN3-207ENST00000559494 ZMYM6O95789 1325 aa24.15■■□□□ 1.46
TSPAN3-207ENST00000559494 MPHOSPH10O00566 681 aaKnown RBP24.14■■□□□ 1.46
TSPAN3-207ENST00000559494 PTH1RQ03431 593 aa24.14■■□□□ 1.46
TSPAN3-207ENST00000559494 RAB3GAP1Q15042 981 aa24.14■■□□□ 1.46
TSPAN3-207ENST00000559494 BEGAINQ9BUH8 593 aa24.14■■□□□ 1.46
TSPAN3-207ENST00000559494 A0A0G2JLL6 359 aaPredicted RBP24.13■■□□□ 1.45
TSPAN3-207ENST00000559494 PRDM1O75626 825 aa24.13■■□□□ 1.45
TSPAN3-207ENST00000559494 TRPA1O75762 1119 aa24.13■■□□□ 1.45
TSPAN3-207ENST00000559494 PRRT2Q7Z6L0 340 aaPredicted RBP24.13■■□□□ 1.45
TSPAN3-207ENST00000559494 ESYT1Q9BSJ8 1104 aa24.13■■□□□ 1.45
TSPAN3-207ENST00000559494 AS3MTQ9HBK9 375 aa24.13■■□□□ 1.45
TSPAN3-207ENST00000559494 BTBD19C9JJ37 291 aa24.12■■□□□ 1.45
TSPAN3-207ENST00000559494 FOXN1O15353 648 aa24.12■■□□□ 1.45
TSPAN3-207ENST00000559494 SLC3A2P08195 630 aaKnown RBP24.12■■□□□ 1.45
TSPAN3-207ENST00000559494 HAND2P61296 217 aa24.12■■□□□ 1.45
TSPAN3-207ENST00000559494 PDE4BQ07343 736 aa24.12■■□□□ 1.45
TSPAN3-207ENST00000559494 TMEM179Q6ZVK1 233 aa24.12■■□□□ 1.45
TSPAN3-207ENST00000559494 FAM43AQ8N2R8 423 aa24.12■■□□□ 1.45
TSPAN3-207ENST00000559494 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.12■■□□□ 1.45
TSPAN3-207ENST00000559494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.12■■□□□ 1.45
TSPAN3-207ENST00000559494 CDC45O75419 566 aa24.11■■□□□ 1.45
TSPAN3-207ENST00000559494 SIAH1Q8IUQ4 282 aa24.11■■□□□ 1.45
TSPAN3-207ENST00000559494 ZNF444Q8N0Y2 327 aaPredicted RBP24.11■■□□□ 1.45
TSPAN3-207ENST00000559494 ACER1Q8TDN7 264 aa24.11■■□□□ 1.45
TSPAN3-207ENST00000559494 NBPF3Q9H094 633 aa24.11■■□□□ 1.45
TSPAN3-207ENST00000559494 ZNF287Q9HBT7 754 aa24.11■■□□□ 1.45
TSPAN3-207ENST00000559494 PTPRFP10586 1907 aa24.11■■□□□ 1.45
TSPAN3-207ENST00000559494 FGRP09769 529 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 BACE1P56817 501 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 OTUD7BQ6GQQ9 843 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 GPAT2Q6NUI2 795 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 TSKSQ9UJT2 592 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 USP17L10C9JJH3 530 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 ZNF213O14771 459 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 CA12O43570 354 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 DGKZQ13574 1117 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 SH3D19Q5HYK7 790 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 FASTKD5Q7L8L6 764 aaKnown RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms