RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 TMOD4Q9NZQ9 345 aa25.93■■□□□ 1.74
CRNDE-205ENST00000558952 PTCH2Q9Y6C5 1203 aa25.93■■□□□ 1.74
CRNDE-205ENST00000558952 MBD4O95243 580 aa25.92■■□□□ 1.74
CRNDE-205ENST00000558952 MTMR2Q13614 643 aa25.92■■□□□ 1.74
CRNDE-205ENST00000558952 UBE3CQ15386 1083 aa25.92■■□□□ 1.74
CRNDE-205ENST00000558952 SLC9C1Q4G0N8 1177 aa25.92■■□□□ 1.74
CRNDE-205ENST00000558952 SH3D19Q5HYK7 790 aa25.92■■□□□ 1.74
CRNDE-205ENST00000558952 TATDN1Q6P1N9 297 aa25.92■■□□□ 1.74
CRNDE-205ENST00000558952 NBPF11Q86T75 865 aa25.92■■□□□ 1.74
CRNDE-205ENST00000558952 SDR42E1Q8WUS8 393 aa25.92■■□□□ 1.74
CRNDE-205ENST00000558952 ZBTB47Q9UFB7 747 aaPredicted RBP25.92■■□□□ 1.74
CRNDE-205ENST00000558952 NAV1Q8NEY1 1877 aa25.91■■□□□ 1.74
CRNDE-205ENST00000558952 OSBPP22059 807 aa25.91■■□□□ 1.74
CRNDE-205ENST00000558952 PLCD1P51178 756 aa25.91■■□□□ 1.74
CRNDE-205ENST00000558952 BACE1P56817 501 aa25.91■■□□□ 1.74
CRNDE-205ENST00000558952 JAG1P78504 1218 aa25.91■■□□□ 1.74
CRNDE-205ENST00000558952 C19orf81C9J6K1 198 aa25.9■■□□□ 1.74
CRNDE-205ENST00000558952 USP17L10C9JJH3 530 aa25.9■■□□□ 1.74
CRNDE-205ENST00000558952 GH2P01242 217 aa25.9■■□□□ 1.74
CRNDE-205ENST00000558952 FCGRTP55899 365 aa25.9■■□□□ 1.74
CRNDE-205ENST00000558952 CERKLQ49MI3 558 aaPredicted RBP25.9■■□□□ 1.74
CRNDE-205ENST00000558952 ARMC5Q96C12 935 aa25.9■■□□□ 1.74
CRNDE-205ENST00000558952 DDRGK1Q96HY6 314 aa25.9■■□□□ 1.74
CRNDE-205ENST00000558952 TRIM47Q96LD4 638 aa25.9■■□□□ 1.74
CRNDE-205ENST00000558952 CABP5Q9NP86 173 aa25.9■■□□□ 1.74
CRNDE-205ENST00000558952 DCP1AQ9NPI6 582 aaPredicted RBP25.9■■□□□ 1.74
CRNDE-205ENST00000558952 LOC285556D6RIA3 1793 aa25.9■■□□□ 1.74
CRNDE-205ENST00000558952 DDX60LQ5H9U9 1706 aaKnown RBP25.89■■□□□ 1.74
CRNDE-205ENST00000558952 SHROOM1Q2M3G4 852 aaPredicted RBP25.89■■□□□ 1.74
CRNDE-205ENST00000558952 SLFNL1Q499Z3 407 aa25.89■■□□□ 1.74
CRNDE-205ENST00000558952 AMOTL1Q8IY63 956 aa25.89■■□□□ 1.74
CRNDE-205ENST00000558952 ATP8A2Q9NTI2 1148 aa25.89■■□□□ 1.74
CRNDE-205ENST00000558952 ZSWIM8A7E2V4 1837 aa25.88■■□□□ 1.73
CRNDE-205ENST00000558952 ERC2O15083 957 aa25.88■■□□□ 1.73
CRNDE-205ENST00000558952 RAB3GAP1Q15042 981 aa25.88■■□□□ 1.73
CRNDE-205ENST00000558952 ABCB5Q2M3G0 1257 aa25.88■■□□□ 1.73
CRNDE-205ENST00000558952 TSHZ3Q63HK5 1081 aa25.88■■□□□ 1.73
CRNDE-205ENST00000558952 SRRDQ9UH36 339 aa25.88■■□□□ 1.73
CRNDE-205ENST00000558952 TTC41PQ6P2S7 1318 aa25.88■■□□□ 1.73
CRNDE-205ENST00000558952 CTGFP29279 349 aa25.87■■□□□ 1.73
CRNDE-205ENST00000558952 KBTBD3Q8NAB2 608 aa25.87■■□□□ 1.73
CRNDE-205ENST00000558952 MYPNQ86TC9 1320 aa25.87■■□□□ 1.73
CRNDE-205ENST00000558952 PRKAB2O43741 272 aa25.86■■□□□ 1.73
CRNDE-205ENST00000558952 SHMT1P34896 483 aa25.86■■□□□ 1.73
CRNDE-205ENST00000558952 GCLCP48506 637 aaPredicted RBP25.86■■□□□ 1.73
CRNDE-205ENST00000558952 IRX3P78415 501 aaPredicted RBP25.86■■□□□ 1.73
CRNDE-205ENST00000558952 ANKRD13CQ8N6S4 541 aa25.86■■□□□ 1.73
CRNDE-205ENST00000558952 RAET1EQ8TD07 263 aa25.86■■□□□ 1.73
CRNDE-205ENST00000558952 FEZ1Q99689 392 aa25.86■■□□□ 1.73
CRNDE-205ENST00000558952 ASCC2Q9H1I8 757 aaPredicted RBP25.86■■□□□ 1.73
CRNDE-205ENST00000558952 MYH7P12883 1935 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 CHGBP05060 677 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 GABPAQ06546 454 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 AAMPQ13685 434 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 FAM110CQ1W6H9 321 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 LRRFIP1Q32MZ4 808 aaKnown RBP25.85■■□□□ 1.73
CRNDE-205ENST00000558952 USP17L2Q6R6M4 530 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 ZNF333Q96JL9 665 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 TMEM106CQ9BVX2 250 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 TAOK2Q9UL54 1235 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 SLC4A4Q9Y6R1 1079 aa25.85■■□□□ 1.73
CRNDE-205ENST00000558952 GCC1Q96CN9 775 aa25.84■■□□□ 1.73
CRNDE-205ENST00000558952 PUS7LQ9H0K6 701 aaKnown RBP25.84■■□□□ 1.73
CRNDE-205ENST00000558952 SWAP70Q9UH65 585 aa25.84■■□□□ 1.73
CRNDE-205ENST00000558952 MPHOSPH10O00566 681 aaKnown RBP25.83■■□□□ 1.73
CRNDE-205ENST00000558952 TNPO2O14787 897 aaKnown RBP25.83■■□□□ 1.73
CRNDE-205ENST00000558952 GLRX3O76003 335 aaKnown RBP25.83■■□□□ 1.73
CRNDE-205ENST00000558952 ZFYP08048 801 aaPredicted RBP25.83■■□□□ 1.73
CRNDE-205ENST00000558952 CYP2D6P10635 497 aa25.83■■□□□ 1.73
CRNDE-205ENST00000558952 HOXA7P31268 230 aaPredicted RBP25.83■■□□□ 1.73
CRNDE-205ENST00000558952 USP14P54578 494 aa25.83■■□□□ 1.73
CRNDE-205ENST00000558952 ANKRD45Q5TZF3 282 aa25.83■■□□□ 1.73
CRNDE-205ENST00000558952 SH3TC2Q8TF17 1288 aa25.83■■□□□ 1.73
CRNDE-205ENST00000558952 MX1P20591 662 aa25.82■■□□□ 1.72
CRNDE-205ENST00000558952 PRKCZQ05513 592 aa25.82■■□□□ 1.72
CRNDE-205ENST00000558952 HDAC1Q13547 482 aaPredicted RBP25.82■■□□□ 1.72
CRNDE-205ENST00000558952 RNF113AO15541 343 aaKnown RBP25.81■■□□□ 1.72
CRNDE-205ENST00000558952 EVX2Q03828 476 aa25.81■■□□□ 1.72
CRNDE-205ENST00000558952 ZYXQ15942 572 aaKnown RBP25.81■■□□□ 1.72
CRNDE-205ENST00000558952 APPBP2Q92624 585 aa25.81■■□□□ 1.72
CRNDE-205ENST00000558952 USP17L12C9JPN9 530 aa25.8■■□□□ 1.72
CRNDE-205ENST00000558952 USP17L21D6R901 530 aa25.8■■□□□ 1.72
CRNDE-205ENST00000558952 PI4K2BQ8TCG2 481 aa25.8■■□□□ 1.72
CRNDE-205ENST00000558952 OTUD7AQ8TE49 926 aaPredicted RBP25.8■■□□□ 1.72
CRNDE-205ENST00000558952 COA7Q96BR5 231 aa25.8■■□□□ 1.72
CRNDE-205ENST00000558952 DYNLL2Q96FJ2 89 aa25.8■■□□□ 1.72
CRNDE-205ENST00000558952 EMILIN3Q9NT22 766 aa25.8■■□□□ 1.72
CRNDE-205ENST00000558952 POTEFA5A3E0 1075 aa25.79■■□□□ 1.72
CRNDE-205ENST00000558952 MYCP01106 439 aaPredicted RBP25.79■■□□□ 1.72
CRNDE-205ENST00000558952 GRK4P32298 578 aa25.79■■□□□ 1.72
CRNDE-205ENST00000558952 C12orf60Q5U649 245 aa25.79■■□□□ 1.72
CRNDE-205ENST00000558952 SLC44A5Q8NCS7 719 aa25.79■■□□□ 1.72
CRNDE-205ENST00000558952 C12orf42Q96LP6 360 aa25.79■■□□□ 1.72
CRNDE-205ENST00000558952 KIAA1683Q9H0B3 1180 aa25.79■■□□□ 1.72
CRNDE-205ENST00000558952 ARPP21Q9UBL0 812 aaPredicted RBP25.79■■□□□ 1.72
CRNDE-205ENST00000558952 HERVK_113P62684 666 aa25.78■■□□□ 1.72
CRNDE-205ENST00000558952 SEPT2Q15019 361 aa25.78■■□□□ 1.72
CRNDE-205ENST00000558952 TMEM179Q6ZVK1 233 aa25.78■■□□□ 1.72
CRNDE-205ENST00000558952 GTF3C2Q8WUA4 911 aaPredicted RBP25.78■■□□□ 1.72
CRNDE-205ENST00000558952 STRBPQ96SI9 672 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms