RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 METP08581 1390 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 FAM229AH3BQW9 127 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 GNB5O14775 395 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 DDX3YO15523 660 aaKnown RBP8.54□□□□□ -1.04
LRRC28-209ENST00000558861 ADAM11O75078 769 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 ZC3H6P61129 1189 aaKnown RBP8.54□□□□□ -1.04
LRRC28-209ENST00000558861 FAM160A1Q05DH4 1040 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 AP3B2Q13367 1082 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 PWP1Q13610 501 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 FOXD4L6Q3SYB3 417 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-209ENST00000558861 FOXD4L3Q6VB84 417 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-209ENST00000558861 PDZD3Q86UT5 571 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 ZNF654Q8IZM8 581 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 GRIN3AQ8TCU5 1115 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
LRRC28-209ENST00000558861 SLC26A8Q96RN1 970 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 CBX8Q9HC52 389 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 KCNK4Q9NYG8 393 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 ADAMTS1Q9UHI8 967 aa8.54□□□□□ -1.04
LRRC28-209ENST00000558861 ZNF335Q9H4Z2 1342 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-209ENST00000558861 ARNTP27540 789 aa8.53□□□□□ -1.04
LRRC28-209ENST00000558861 RPS26P62854 115 aaKnown RBP8.53□□□□□ -1.04
LRRC28-209ENST00000558861 MAP4K3Q8IVH8 894 aa8.53□□□□□ -1.04
LRRC28-209ENST00000558861 DTWD1Q8N5C7 304 aa8.53□□□□□ -1.04
LRRC28-209ENST00000558861 KLHL23Q8NBE8 558 aa8.53□□□□□ -1.04
LRRC28-209ENST00000558861 USP26Q9BXU7 913 aa8.53□□□□□ -1.04
LRRC28-209ENST00000558861 ZC3H12CQ9C0D7 883 aaKnown RBP8.53□□□□□ -1.04
LRRC28-209ENST00000558861 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
LRRC28-209ENST00000558861 SAMM50Q9Y512 469 aa8.53□□□□□ -1.04
LRRC28-209ENST00000558861 PCDHB5Q9Y5E4 795 aa8.53□□□□□ -1.04
LRRC28-209ENST00000558861 ALKQ9UM73 1620 aa8.53□□□□□ -1.04
LRRC28-209ENST00000558861 ADGRB1O14514 1584 aa8.52□□□□□ -1.04
LRRC28-209ENST00000558861 NWD1Q149M9 1564 aa8.52□□□□□ -1.04
LRRC28-209ENST00000558861 PIK3R4Q99570 1358 aa8.52□□□□□ -1.05
LRRC28-209ENST00000558861 PF4P02776 101 aa8.52□□□□□ -1.05
LRRC28-209ENST00000558861 CTSBP07858 339 aa8.52□□□□□ -1.05
LRRC28-209ENST00000558861 GSTP1P09211 210 aaKnown RBP8.52□□□□□ -1.05
LRRC28-209ENST00000558861 MAOBP27338 520 aa8.52□□□□□ -1.05
LRRC28-209ENST00000558861 CD68P34810 354 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-209ENST00000558861 EIF4A3P38919 411 aaKnown RBP8.52□□□□□ -1.05
LRRC28-209ENST00000558861 ZNF252P-AS1Q0IIN9 211 aa8.52□□□□□ -1.05
LRRC28-209ENST00000558861 SUZ12Q15022 739 aaKnown RBP8.52□□□□□ -1.05
LRRC28-209ENST00000558861 POU4F3Q15319 338 aa8.52□□□□□ -1.05
LRRC28-209ENST00000558861 LLGL2Q6P1M3 1020 aa8.52□□□□□ -1.05
LRRC28-209ENST00000558861 MPRIPQ6WCQ1 1025 aa8.52□□□□□ -1.05
LRRC28-209ENST00000558861 FMR1NBQ8N0W7 255 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-209ENST00000558861 DCAF11Q8TEB1 546 aa8.52□□□□□ -1.05
LRRC28-209ENST00000558861 C14orf93Q9H972 538 aaKnown RBP8.52□□□□□ -1.05
LRRC28-209ENST00000558861 STRCP1A6NGW2 1772 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 CYP11A1P05108 521 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 RAC1P63000 192 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 CAMK2GQ13555 558 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-209ENST00000558861 SEPT6Q14141 434 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 NAALADL2Q58DX5 795 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 GAL3ST3Q96A11 431 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 C8orf37Q96NL8 207 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 TINF2Q9BSI4 451 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 CAPN10Q9HC96 672 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 ADAMTS8Q9UP79 889 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 TECPR2O15040 1411 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 CNTNAP5Q8WYK1 1306 aa8.51□□□□□ -1.05
LRRC28-209ENST00000558861 LOC100289279A0A1B0GTE1 492 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 DLL1O00548 723 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 KCNA6P17658 529 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 GARTP22102 1010 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 LMNB2Q03252 620 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 PAK2Q13177 524 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 NBPF8Q3BBV2 869 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 MAP1SQ66K74 1059 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-209ENST00000558861 FBXL19Q6PCT2 694 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 PODNQ7Z5L7 613 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 FBXO11Q86XK2 927 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 KIAA0825Q8IV33 1275 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 XRN1Q8IZH2 1706 aaKnown RBP8.5□□□□□ -1.05
LRRC28-209ENST00000558861 UBASH3BQ8TF42 649 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 KCNB2Q92953 911 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 CORO1BQ9BR76 489 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 SPON2Q9BUD6 331 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 EMILIN2Q9BXX0 1053 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 CYP8B1Q9UNU6 501 aa8.5□□□□□ -1.05
LRRC28-209ENST00000558861 GPRASP1Q5JY77 1395 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 WISP1O95388 367 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 DLGAP3O95886 979 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 LMNB1P20700 586 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 PTPN11Q06124 597 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-209ENST00000558861 LRRC14Q15048 493 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 SNAP47Q5SQN1 464 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 BNC2Q6ZN30 1099 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-209ENST00000558861 TRIM42Q8IWZ5 723 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 GOLM1Q8NBJ4 401 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 ZNF296Q8WUU4 475 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-209ENST00000558861 CCDC86Q9H6F5 360 aaKnown RBP8.49□□□□□ -1.05
LRRC28-209ENST00000558861 KCNQ5Q9NR82 932 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 INPP5FQ9Y2H2 1132 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 NKTRP30414 1462 aaKnown RBP8.49□□□□□ -1.05
LRRC28-209ENST00000558861 LRRC7Q96NW7 1537 aa8.49□□□□□ -1.05
LRRC28-209ENST00000558861 LRPPRCP42704 1394 aaKnown RBP8.48□□□□□ -1.05
LRRC28-209ENST00000558861 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms