RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 UBE3CQ15386 1083 aa18.45■□□□□ 0.54
RPL28-207ENST00000558815 TREML2Q5T2D2 321 aa18.45■□□□□ 0.54
RPL28-207ENST00000558815 C17orf99Q6UX52 265 aa18.45■□□□□ 0.54
RPL28-207ENST00000558815 KBTBD3Q8NAB2 608 aa18.45■□□□□ 0.54
RPL28-207ENST00000558815 TBC1D2Q9BYX2 928 aa18.45■□□□□ 0.54
RPL28-207ENST00000558815 ARHGAP39Q9C0H5 1083 aa18.45■□□□□ 0.54
RPL28-207ENST00000558815 EHD4Q9H223 541 aa18.45■□□□□ 0.54
RPL28-207ENST00000558815 DCP1AQ9NPI6 582 aaPredicted RBP18.45■□□□□ 0.54
RPL28-207ENST00000558815 TTC41PQ6P2S7 1318 aa18.45■□□□□ 0.54
RPL28-207ENST00000558815 ERC2O15083 957 aa18.44■□□□□ 0.54
RPL28-207ENST00000558815 GH2P01242 217 aa18.44■□□□□ 0.54
RPL28-207ENST00000558815 LACTBP83111 547 aaPredicted RBP18.44■□□□□ 0.54
RPL28-207ENST00000558815 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
RPL28-207ENST00000558815 GCC1Q96CN9 775 aa18.44■□□□□ 0.54
RPL28-207ENST00000558815 PUS7LQ9H0K6 701 aaKnown RBP18.44■□□□□ 0.54
RPL28-207ENST00000558815 AGTPBP1Q9UPW5 1226 aa18.44■□□□□ 0.54
RPL28-207ENST00000558815 PTPN22Q9Y2R2 807 aa18.44■□□□□ 0.54
RPL28-207ENST00000558815 ADGRA2Q96PE1 1338 aa18.44■□□□□ 0.54
RPL28-207ENST00000558815 MX1P20591 662 aa18.43■□□□□ 0.54
RPL28-207ENST00000558815 HDAC1Q13547 482 aaPredicted RBP18.43■□□□□ 0.54
RPL28-207ENST00000558815 CERKLQ49MI3 558 aaPredicted RBP18.43■□□□□ 0.54
RPL28-207ENST00000558815 SLC4A4Q9Y6R1 1079 aa18.43■□□□□ 0.54
RPL28-207ENST00000558815 MGAMO43451 1857 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 GLRX3O76003 335 aaKnown RBP18.42■□□□□ 0.54
RPL28-207ENST00000558815 SHMT1P34896 483 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 ABCB5Q2M3G0 1257 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 B4GALNT3Q6L9W6 998 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 TATDN1Q6P1N9 297 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 PROCA1Q8NCQ7 364 aaPredicted RBP18.42■□□□□ 0.54
RPL28-207ENST00000558815 PI4K2BQ8TCG2 481 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 DDRGK1Q96HY6 314 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 WDR18Q9BV38 432 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 ATP8A2Q9NTI2 1148 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 TMOD4Q9NZQ9 345 aa18.42■□□□□ 0.54
RPL28-207ENST00000558815 CYP2D7A0A087X1C5 515 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 MPHOSPH10O00566 681 aaKnown RBP18.41■□□□□ 0.54
RPL28-207ENST00000558815 FMNL1O95466 1100 aaPredicted RBP18.41■□□□□ 0.54
RPL28-207ENST00000558815 PSMC4P43686 418 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 IRX6P78412 446 aaPredicted RBP18.41■□□□□ 0.54
RPL28-207ENST00000558815 AAMPQ13685 434 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 ZYXQ15942 572 aaKnown RBP18.41■□□□□ 0.54
RPL28-207ENST00000558815 AMOTL1Q8IY63 956 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 SLC44A5Q8NCS7 719 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 DYNLL2Q96FJ2 89 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 FEZ1Q99689 392 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 FSD1Q9BTV5 496 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 CABP5Q9NP86 173 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 GINM1Q9NU53 330 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 PNMA3Q9UL41 463 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 SLC45A1Q9Y2W3 748 aa18.41■□□□□ 0.54
RPL28-207ENST00000558815 USP17L10C9JJH3 530 aa18.4■□□□□ 0.54
RPL28-207ENST00000558815 RNF113AO15541 343 aaKnown RBP18.4■□□□□ 0.54
RPL28-207ENST00000558815 BACE1P56817 501 aa18.4■□□□□ 0.54
RPL28-207ENST00000558815 PABPC4Q13310 644 aaKnown RBP eCLIP18.4■□□□□ 0.546e-10■■■■■ 42.7
RPL28-207ENST00000558815 SH3D19Q5HYK7 790 aa18.4■□□□□ 0.54
RPL28-207ENST00000558815 APPBP2Q92624 585 aa18.4■□□□□ 0.54
RPL28-207ENST00000558815 LNPKQ9C0E8 428 aa18.4■□□□□ 0.54
RPL28-207ENST00000558815 RWDD1Q9H446 243 aaPredicted RBP18.4■□□□□ 0.54
RPL28-207ENST00000558815 PTCH2Q9Y6C5 1203 aa18.4■□□□□ 0.54
RPL28-207ENST00000558815 SMIM22K7EJ46 135 aa18.39■□□□□ 0.53
RPL28-207ENST00000558815 ZFYP08048 801 aaPredicted RBP18.39■□□□□ 0.53
RPL28-207ENST00000558815 BCRP11274 1271 aa18.39■□□□□ 0.53
RPL28-207ENST00000558815 OSBPP22059 807 aa18.39■□□□□ 0.53
RPL28-207ENST00000558815 CTGFP29279 349 aa18.39■□□□□ 0.53
RPL28-207ENST00000558815 GABPAQ06546 454 aa18.39■□□□□ 0.53
RPL28-207ENST00000558815 ANKRD13CQ8N6S4 541 aa18.39■□□□□ 0.53
RPL28-207ENST00000558815 OSBP2Q969R2 916 aa18.39■□□□□ 0.53
RPL28-207ENST00000558815 TRIM47Q96LD4 638 aa18.39■□□□□ 0.53
RPL28-207ENST00000558815 USP17L12C9JPN9 530 aa18.38■□□□□ 0.53
RPL28-207ENST00000558815 USP17L21D6R901 530 aa18.38■□□□□ 0.53
RPL28-207ENST00000558815 M0R2C6 588 aa18.38■□□□□ 0.53
RPL28-207ENST00000558815 IRX3P78415 501 aaPredicted RBP18.38■□□□□ 0.53
RPL28-207ENST00000558815 LRRFIP1Q32MZ4 808 aaKnown RBP18.38■□□□□ 0.53
RPL28-207ENST00000558815 STRBPQ96SI9 672 aaKnown RBP18.38■□□□□ 0.53
RPL28-207ENST00000558815 ASCC2Q9H1I8 757 aaPredicted RBP18.38■□□□□ 0.53
RPL28-207ENST00000558815 SALL3Q9BXA9 1300 aa18.38■□□□□ 0.53
RPL28-207ENST00000558815 C19orf81C9J6K1 198 aa18.37■□□□□ 0.53
RPL28-207ENST00000558815 GPAA1O43292 621 aa18.37■□□□□ 0.53
RPL28-207ENST00000558815 MYCP01106 439 aaPredicted RBP18.37■□□□□ 0.53
RPL28-207ENST00000558815 IGHDP01880 384 aa18.37■□□□□ 0.53
RPL28-207ENST00000558815 SEPT2Q15019 361 aa18.37■□□□□ 0.53
RPL28-207ENST00000558815 SLC9C1Q4G0N8 1177 aa18.37■□□□□ 0.53
RPL28-207ENST00000558815 C12orf60Q5U649 245 aa18.37■□□□□ 0.53
RPL28-207ENST00000558815 STK11IPQ8N1F8 1099 aa18.37■□□□□ 0.53
RPL28-207ENST00000558815 SWAP70Q9UH65 585 aa18.37■□□□□ 0.53
RPL28-207ENST00000558815 PDE1AP54750 535 aa18.36■□□□□ 0.53
RPL28-207ENST00000558815 FCGRTP55899 365 aa18.36■□□□□ 0.53
RPL28-207ENST00000558815 MLLT1Q03111 559 aaPredicted RBP18.36■□□□□ 0.53
RPL28-207ENST00000558815 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
RPL28-207ENST00000558815 MYPNQ86TC9 1320 aa18.36■□□□□ 0.53
RPL28-207ENST00000558815 ACER1Q8TDN7 264 aa18.36■□□□□ 0.53
RPL28-207ENST00000558815 SEC62Q99442 399 aaKnown RBP18.36■□□□□ 0.53
RPL28-207ENST00000558815 EMILIN3Q9NT22 766 aa18.36■□□□□ 0.53
RPL28-207ENST00000558815 MINDY4BA8MYZ0 360 aa18.35■□□□□ 0.53
RPL28-207ENST00000558815 GNRH1P01148 92 aa18.35■□□□□ 0.53
RPL28-207ENST00000558815 APPP05067 770 aa18.35■□□□□ 0.53
RPL28-207ENST00000558815 HOXD10P28358 340 aa18.35■□□□□ 0.53
RPL28-207ENST00000558815 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
RPL28-207ENST00000558815 CTR9Q6PD62 1173 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms