RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 DNAJC18Q9H819 358 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 HMX1Q9NP08 348 aaPredicted RBP13.09□□□□□ -0.31
AP3S2-206ENST00000558806 GJD2Q9UKL4 321 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 RPTORQ8N122 1335 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 A0A1W2PPC1 479 aa13.08□□□□□ -0.32
AP3S2-206ENST00000558806 ITPRIPQ8IWB1 547 aa13.08□□□□□ -0.32
AP3S2-206ENST00000558806 GTF3C2Q8WUA4 911 aaPredicted RBP13.08□□□□□ -0.32
AP3S2-206ENST00000558806 PAWRQ96IZ0 340 aaKnown RBP13.08□□□□□ -0.32
AP3S2-206ENST00000558806 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.32
AP3S2-206ENST00000558806 ZBTB21Q9ULJ3 1066 aa13.08□□□□□ -0.32
AP3S2-206ENST00000558806 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
AP3S2-206ENST00000558806 FOCADQ5VW36 1801 aa13.08□□□□□ -0.32
AP3S2-206ENST00000558806 GDF11O95390 407 aa13.07□□□□□ -0.32
AP3S2-206ENST00000558806 CYP7A1P22680 504 aa13.07□□□□□ -0.32
AP3S2-206ENST00000558806 MAPK4P31152 587 aa13.07□□□□□ -0.32
AP3S2-206ENST00000558806 HERVK_113P62684 666 aa13.07□□□□□ -0.32
AP3S2-206ENST00000558806 JAG1P78504 1218 aa13.07□□□□□ -0.32
AP3S2-206ENST00000558806 TMED8Q6PL24 325 aaPredicted RBP13.07□□□□□ -0.32
AP3S2-206ENST00000558806 GPRC5AQ8NFJ5 357 aa13.07□□□□□ -0.32
AP3S2-206ENST00000558806 SOCS4Q8WXH5 440 aa13.07□□□□□ -0.32
AP3S2-206ENST00000558806 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
AP3S2-206ENST00000558806 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
AP3S2-206ENST00000558806 PIH1D3Q9NQM4 214 aaKnown RBP13.07□□□□□ -0.32
AP3S2-206ENST00000558806 SZT2Q5T011 3432 aa13.07□□□□□ -0.32
AP3S2-206ENST00000558806 CEP290O15078 2479 aa13.06□□□□□ -0.32
AP3S2-206ENST00000558806 CDK5RAP2Q96SN8 1893 aa13.06□□□□□ -0.32
AP3S2-206ENST00000558806 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
AP3S2-206ENST00000558806 XRCC5P13010 732 aaKnown RBP13.06□□□□□ -0.32
AP3S2-206ENST00000558806 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
AP3S2-206ENST00000558806 CCAR1Q8IX12 1150 aaKnown RBP13.06□□□□□ -0.32
AP3S2-206ENST00000558806 TRMT44Q8IYL2 757 aaKnown RBP13.06□□□□□ -0.32
AP3S2-206ENST00000558806 NUDT12Q9BQG2 462 aa13.06□□□□□ -0.32
AP3S2-206ENST00000558806 CCDC8Q9H0W5 538 aaPredicted RBP13.06□□□□□ -0.32
AP3S2-206ENST00000558806 TLR7Q9NYK1 1049 aaKnown RBP13.06□□□□□ -0.32
AP3S2-206ENST00000558806 SAP30BPQ9UHR5 308 aaKnown RBP13.06□□□□□ -0.32
AP3S2-206ENST00000558806 RANBP2P49792 3224 aaKnown RBP13.06□□□□□ -0.32
AP3S2-206ENST00000558806 DOCK3Q8IZD9 2030 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 CYP2B6P20813 491 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 USP5P45974 858 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 DYNLL1P63167 89 aaKnown RBP13.05□□□□□ -0.32
AP3S2-206ENST00000558806 SHROOM1Q2M3G4 852 aaPredicted RBP13.05□□□□□ -0.32
AP3S2-206ENST00000558806 USP17L2Q6R6M4 530 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 ERC1Q8IUD2 1116 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 DIS3LQ8TF46 1054 aaKnown RBP13.05□□□□□ -0.32
AP3S2-206ENST00000558806 TRIB2Q92519 343 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
AP3S2-206ENST00000558806 NBPF3Q9H094 633 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 EHD4Q9H223 541 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 TXNRD2Q9NNW7 524 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
AP3S2-206ENST00000558806 GH2P01242 217 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
AP3S2-206ENST00000558806 ERVK-9P63128 1117 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 ERVK-24P63145 666 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 MAP3K12Q12852 859 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 TRIM32Q13049 653 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 MAP3K21Q5TCX8 1036 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 TATDN1Q6P1N9 297 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 MAGEB6Q8N7X4 407 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 MIGA1Q8NAN2 632 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 C12orf42Q96LP6 360 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 FEZ1Q99689 392 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 SERPINB13Q9UIV8 391 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 OGDHLQ9ULD0 1010 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 PLXNB2O15031 1838 aa13.04□□□□□ -0.32
AP3S2-206ENST00000558806 PEX10O60683 326 aa13.03□□□□□ -0.32
AP3S2-206ENST00000558806 RLBP1P12271 317 aa13.03□□□□□ -0.32
AP3S2-206ENST00000558806 ZKSCAN1P17029 563 aaPredicted RBP13.03□□□□□ -0.32
AP3S2-206ENST00000558806 RGS2P41220 211 aa13.03□□□□□ -0.32
AP3S2-206ENST00000558806 USP14P54578 494 aa13.03□□□□□ -0.32
AP3S2-206ENST00000558806 HNRNPUQ00839 825 aaKnown RBP eCLIP13.03□□□□□ -0.32
AP3S2-206ENST00000558806 CEP85Q6P2H3 762 aa13.03□□□□□ -0.32
AP3S2-206ENST00000558806 GPR142Q7Z601 462 aa13.03□□□□□ -0.32
AP3S2-206ENST00000558806 PAGR1Q9BTK6 254 aa13.03□□□□□ -0.32
AP3S2-206ENST00000558806 C11orf49Q9H6J7 331 aa13.03□□□□□ -0.32
AP3S2-206ENST00000558806 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
AP3S2-206ENST00000558806 MYO5AQ9Y4I1 1855 aaKnown RBP13.03□□□□□ -0.32
AP3S2-206ENST00000558806 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 CCNA1P78396 465 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 RAB3GAP1Q15042 981 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 Q3C1V9 767 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 CERKLQ49MI3 558 aaPredicted RBP13.02□□□□□ -0.33
AP3S2-206ENST00000558806 HSP90AB4PQ58FF6 505 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 C7orf61Q8IZ16 206 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 USP6NLQ92738 828 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 PORCNQ9H237 461 aa13.02□□□□□ -0.33
AP3S2-206ENST00000558806 ANTXR1Q9H6X2 564 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms