RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 ZNF445P59923 1031 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 MYSM1Q5VVJ2 828 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 CRACR2BQ8N4Y2 399 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 MROH7-TTC4A0A0A0MT08 1334 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 BIN1O00499 593 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 XBP1P17861 261 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 EYA3Q99504 573 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 RGS17Q9UGC6 210 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 RASGRP2Q7LDG7 609 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 TBC1D22AQ8WUA7 517 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 PDILTQ8N807 584 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 R3HCC1Q9Y3T6 440 aaKnown RBP12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 PCDHAC2Q9Y5I4 1007 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 SPTLC2O15270 562 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 TPM2P07951 284 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 HMGB2P26583 209 aaKnown RBP12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 KIF23Q02241 960 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 WASF1Q92558 559 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 RAD17O75943 681 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 CCDC192P0DO97 292 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 NLRP5P59047 1200 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 SGMS1Q86VZ5 419 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 COA1Q9GZY4 146 aa12.49□□□□□ -0.41
CSPG4P5-201ENST00000558731 HOXA10P31260 410 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 PNMA1Q8ND90 353 aa12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 GPKOWQ92917 476 aaPredicted RBP eCLIP12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 DAGLAQ9Y4D2 1042 aa12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 DRC7Q8IY82 874 aa12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 FAM217BQ9NTX9 383 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 C12orf60Q5U649 245 aa12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 CLIC6Q96NY7 704 aa12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 PCDHA7Q9UN72 937 aa12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 SCAF8Q9UPN6 1271 aaKnown RBP12.48□□□□□ -0.41
CSPG4P5-201ENST00000558731 DEXIO95424 95 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 HEATR3Q7Z4Q2 680 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 LRRC47Q8N1G4 583 aaKnown RBP12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 RTFDC1Q9BY42 306 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 TNRC6CQ9HCJ0 1690 aaKnown RBP12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 BRWD3Q6RI45 1802 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 PLCG2P16885 1265 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 LARGE2Q8N3Y3 721 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 CERS5Q8N5B7 392 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 TMEM87AQ8NBN3 555 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 SPC24Q8NBT2 197 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 TEKT1Q969V4 418 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 BAZ2AQ9UIF9 1905 aaKnown RBP12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 ECE2O60344 883 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 IFNAR1P17181 557 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 IKQ13123 557 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 RBM26Q5T8P6 1007 aaKnown RBP12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 ILDR1Q86SU0 546 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 RASSF8Q8NHQ8 419 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
CSPG4P5-201ENST00000558731 WDR19Q8NEZ3 1342 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 SALL1Q9NSC2 1324 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 CDK8P49336 464 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 CNKSR1Q969H4 720 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 DNAJC25Q9H1X3 360 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 PDCL3Q9H2J4 239 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 ZNF287Q9HBT7 754 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 ZNF277Q9NRM2 450 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 FLT1P17948 1338 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 MYH7P12883 1935 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 SCN7AQ01118 1682 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 FAM205CA6NFA0 338 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 EVCP57679 992 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 ANO6Q4KMQ2 910 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 DNTTIP2Q5QJE6 756 aaKnown RBP12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 STAG2Q8N3U4 1231 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 VEZTQ9HBM0 779 aa12.46□□□□□ -0.41
CSPG4P5-201ENST00000558731 LRP5O75197 1615 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 FRMPD2Q68DX3 1309 aaPredicted RBP12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 CLRN2A0PK11 232 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 BECN2A8MW95 431 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 NTRK3Q16288 839 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 BRAPQ7Z569 592 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 LUZP1Q86V48 1076 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 RASGRP4Q8TDF6 673 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 MRPS27Q92552 414 aaKnown RBP12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 UBA5Q9GZZ9 404 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 DDX19AQ9NUU7 478 aaKnown RBP12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 MRVI1Q9Y6F6 885 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 MYH13Q9UKX3 1938 aa12.46□□□□□ -0.42
CSPG4P5-201ENST00000558731 BCORQ6W2J9 1755 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 LETM1O95202 739 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 IL1R1P14778 569 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 KIF5BP33176 963 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 NFIAQ12857 509 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 CCDC96Q2M329 555 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 USP17L2Q6R6M4 530 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 GOLPH3LQ9H4A5 285 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 TYRO3Q06418 890 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 SEC23AQ15436 765 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 SBF2Q86WG5 1849 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms