RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 NAA16Q6N069 864 aaPredicted RBP9.86□□□□□ -0.83
TRAF3-205ENST00000558700 C17orf99Q6UX52 265 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 TBC1D9Q6ZT07 1266 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 PRRT2Q7Z6L0 340 aaPredicted RBP9.86□□□□□ -0.83
TRAF3-205ENST00000558700 NBPF11Q86T75 865 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 ERC1Q8IUD2 1116 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 TEX11Q8IYF3 940 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 DDX12PQ92771 950 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 ZNF333Q96JL9 665 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 ZNF512BQ96KM6 892 aaPredicted RBP9.86□□□□□ -0.83
TRAF3-205ENST00000558700 SLC45A1Q9Y2W3 748 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 ZHX2Q9Y6X8 837 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 NAV1Q8NEY1 1877 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 DDX60LQ5H9U9 1706 aaKnown RBP9.85□□□□□ -0.83
TRAF3-205ENST00000558700 ZBTB7BO15156 539 aaPredicted RBP9.85□□□□□ -0.83
TRAF3-205ENST00000558700 PTPRAP18433 802 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 CAP1Q01518 475 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 MOGSQ13724 837 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 HSP90AB4PQ58FF6 505 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 CEP85Q6P2H3 762 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 GADL1Q6ZQY3 521 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 PCMTD1Q96MG8 357 aaPredicted RBP9.85□□□□□ -0.83
TRAF3-205ENST00000558700 TBC1D2Q9BYX2 928 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 ARHGAP39Q9C0H5 1083 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRAF3-205ENST00000558700 CPA4Q9UI42 421 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 HERC5Q9UII4 1024 aaKnown RBP9.85□□□□□ -0.83
TRAF3-205ENST00000558700 DBNLQ9UJU6 430 aaKnown RBP9.85□□□□□ -0.83
TRAF3-205ENST00000558700 MYH1P12882 1939 aa9.85□□□□□ -0.83
TRAF3-205ENST00000558700 KIAA0100Q14667 2235 aaKnown RBP9.84□□□□□ -0.83
TRAF3-205ENST00000558700 POTEFA5A3E0 1075 aa9.84□□□□□ -0.83
TRAF3-205ENST00000558700 TRIM75PA6NK02 468 aa9.84□□□□□ -0.83
TRAF3-205ENST00000558700 HOXD10P28358 340 aa9.84□□□□□ -0.83
TRAF3-205ENST00000558700 IER5LQ5T953 404 aa9.84□□□□□ -0.83
TRAF3-205ENST00000558700 GPAT2Q6NUI2 795 aa9.84□□□□□ -0.83
TRAF3-205ENST00000558700 CERS3Q8IU89 383 aa9.84□□□□□ -0.83
TRAF3-205ENST00000558700 SMCR8Q8TEV9 937 aaPredicted RBP9.84□□□□□ -0.83
TRAF3-205ENST00000558700 DHX36Q9H2U1 1008 aaKnown RBP9.84□□□□□ -0.83
TRAF3-205ENST00000558700 SNRKQ9NRH2 765 aa9.84□□□□□ -0.83
TRAF3-205ENST00000558700 AATFQ9NY61 560 aaKnown RBP eCLIP9.84□□□□□ -0.83
TRAF3-205ENST00000558700 TLR7Q9NYK1 1049 aaKnown RBP9.84□□□□□ -0.83
TRAF3-205ENST00000558700 AFG3L2Q9Y4W6 797 aa9.84□□□□□ -0.83
TRAF3-205ENST00000558700 FLT1P17948 1338 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 MYPNQ86TC9 1320 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 FAM196BA6NMK8 535 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 FMNL1O95466 1100 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-205ENST00000558700 CYP2E1P05181 493 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-205ENST00000558700 HLA-DOAP06340 250 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 BCRP11274 1271 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 ZAP70P43403 619 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 PSMC4P43686 418 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 FCGRTP55899 365 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 TMED8Q6PL24 325 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-205ENST00000558700 AACSQ86V21 672 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 PROCA1Q8NCQ7 364 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-205ENST00000558700 RAET1EQ8TD07 263 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 OXER1Q8TDS5 423 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 PANK1Q8TE04 598 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 SH3RF3Q8TEJ3 882 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-205ENST00000558700 TRIM47Q96LD4 638 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 TRIM34Q9BYJ4 488 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 SRRDQ9UH36 339 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 PNMA3Q9UL41 463 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 DDX19BQ9UMR2 479 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 AGTPBP1Q9UPW5 1226 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 EXOC6BQ9Y2D4 811 aa9.83□□□□□ -0.84
TRAF3-205ENST00000558700 GALR2O43603 387 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 HMMRO75330 724 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 IDH1O75874 414 aaKnown RBP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 SLC34A2O95436 690 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 CYP2C8P10632 490 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 CAP2P40123 477 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 PPP4CP60510 307 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 IRX5P78411 483 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 PABPC4Q13310 644 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 SLC4A8Q2Y0W8 1093 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 CCDC84Q86UT8 332 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 MAPKAPK5Q8IW41 473 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 CRACR2BQ8N4Y2 399 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 SH3TC2Q8TF17 1288 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 CCDC8Q9H0W5 538 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 CHMP4BQ9H444 224 aaKnown RBP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 AS3MTQ9HBK9 375 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 PIH1D3Q9NQM4 214 aaKnown RBP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-205ENST00000558700 PI4KBQ9UBF8 816 aa9.82□□□□□ -0.84
TRAF3-205ENST00000558700 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 ASNSP08243 561 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 SLURP2P0DP57 97 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 CYP7A1P22680 504 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 CTGFP29279 349 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 MAP3K12Q12852 859 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 FAM110CQ1W6H9 321 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 ADGRA1Q86SQ6 560 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 ZNF280CQ8ND82 737 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 TGFBRAP1Q8WUH2 860 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 EAF2Q96CJ1 260 aaPredicted RBP9.81□□□□□ -0.84
TRAF3-205ENST00000558700 MYH7P12883 1935 aa9.81□□□□□ -0.84
TRAF3-205ENST00000558700 APBB1O00213 710 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 EVI5O60447 810 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms