RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 MAP3K9P80192 1104 aa18.69■□□□□ 0.58
LINC01220-201ENST00000558575 PICALMQ13492 652 aa18.69■□□□□ 0.58
LINC01220-201ENST00000558575 TTC22Q5TAA0 569 aa18.69■□□□□ 0.58
LINC01220-201ENST00000558575 C17orf99Q6UX52 265 aa18.69■□□□□ 0.58
LINC01220-201ENST00000558575 U2AF1L4Q8WU68 220 aaKnown RBP18.69■□□□□ 0.58
LINC01220-201ENST00000558575 SEC62Q99442 399 aaKnown RBP18.69■□□□□ 0.58
LINC01220-201ENST00000558575 RNF208Q9H0X6 261 aa18.69■□□□□ 0.58
LINC01220-201ENST00000558575 ARMT1Q9H993 441 aa18.69■□□□□ 0.58
LINC01220-201ENST00000558575 MAST2Q6P0Q8 1798 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 TRIM6-TRIM34B2RNG4 842 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 PRKAB2O43741 272 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 MBD4O95243 580 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 ZFYP08048 801 aaPredicted RBP18.68■□□□□ 0.58
LINC01220-201ENST00000558575 SLURP2P0DP57 97 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 PSMC4P43686 418 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 ZMYM1Q5SVZ6 1142 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 MAPKAPK5Q8IW41 473 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 APPBP2Q92624 585 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 ZCCHC17Q9NP64 241 aaKnown RBP18.68■□□□□ 0.58
LINC01220-201ENST00000558575 CPA4Q9UI42 421 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 STXBP5LQ9Y2K9 1186 aa18.68■□□□□ 0.58
LINC01220-201ENST00000558575 M0R2C6 588 aa18.67■□□□□ 0.58
LINC01220-201ENST00000558575 EVI5O60447 810 aa18.67■□□□□ 0.58
LINC01220-201ENST00000558575 CETPP11597 493 aa18.67■□□□□ 0.58
LINC01220-201ENST00000558575 RAET1EQ8TD07 263 aa18.67■□□□□ 0.58
LINC01220-201ENST00000558575 RILPL2Q969X0 211 aa18.67■□□□□ 0.58
LINC01220-201ENST00000558575 STRBPQ96SI9 672 aaKnown RBP18.67■□□□□ 0.58
LINC01220-201ENST00000558575 OSBPL5Q9H0X9 879 aaPredicted RBP18.67■□□□□ 0.58
LINC01220-201ENST00000558575 SNCAIPQ9Y6H5 919 aa18.67■□□□□ 0.58
LINC01220-201ENST00000558575 MYPNQ86TC9 1320 aa18.67■□□□□ 0.58
LINC01220-201ENST00000558575 ADGRA2Q96PE1 1338 aa18.67■□□□□ 0.58
LINC01220-201ENST00000558575 SDSP20132 328 aa18.66■□□□□ 0.58
LINC01220-201ENST00000558575 GPR153Q6NV75 609 aa18.66■□□□□ 0.58
LINC01220-201ENST00000558575 UNC93B1Q9H1C4 597 aa18.66■□□□□ 0.58
LINC01220-201ENST00000558575 CSADQ9Y600 493 aa18.66■□□□□ 0.58
LINC01220-201ENST00000558575 FLT1P17948 1338 aa18.66■□□□□ 0.58
LINC01220-201ENST00000558575 ATRNL1Q5VV63 1379 aa18.66■□□□□ 0.58
LINC01220-201ENST00000558575 RPAP1Q9BWH6 1393 aaPredicted RBP18.66■□□□□ 0.58
LINC01220-201ENST00000558575 VCANP13611 3396 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 PTPRFP10586 1907 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 AK9Q5TCS8 1911 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 IRF6O14896 467 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 MAP3K10Q02779 954 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 MIGA2Q7L4E1 593 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 CERS3Q8IU89 383 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 SDR42E1Q8WUS8 393 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 GDF15Q99988 308 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 MTMR10Q9NXD2 777 aa18.65■□□□□ 0.58
LINC01220-201ENST00000558575 DDX60LQ5H9U9 1706 aaKnown RBP18.65■□□□□ 0.58
LINC01220-201ENST00000558575 SPTBN5Q9NRC6 3674 aaKnown RBP18.64■□□□□ 0.57
LINC01220-201ENST00000558575 SGPL1O95470 568 aa18.64■□□□□ 0.57
LINC01220-201ENST00000558575 TICAM2Q86XR7 235 aa18.64■□□□□ 0.57
LINC01220-201ENST00000558575 ERO1BQ86YB8 467 aa18.64■□□□□ 0.57
LINC01220-201ENST00000558575 FAM227BQ96M60 508 aa18.64■□□□□ 0.57
LINC01220-201ENST00000558575 CRNKL1Q9BZJ0 848 aaKnown RBP18.64■□□□□ 0.57
LINC01220-201ENST00000558575 PALD1Q9ULE6 856 aa18.64■□□□□ 0.57
LINC01220-201ENST00000558575 GPAA1O43292 621 aa18.63■□□□□ 0.57
LINC01220-201ENST00000558575 FMNL1O95466 1100 aaPredicted RBP18.63■□□□□ 0.57
LINC01220-201ENST00000558575 USP5P45974 858 aa18.63■□□□□ 0.57
LINC01220-201ENST00000558575 PRKCZQ05513 592 aa18.63■□□□□ 0.57
LINC01220-201ENST00000558575 NMIQ13287 307 aaPredicted RBP18.63■□□□□ 0.57
LINC01220-201ENST00000558575 SNAPC2Q13487 334 aa18.63■□□□□ 0.57
LINC01220-201ENST00000558575 LRRFIP1Q32MZ4 808 aaKnown RBP18.63■□□□□ 0.57
LINC01220-201ENST00000558575 ZSCAN29Q8IWY8 852 aaPredicted RBP18.63■□□□□ 0.57
LINC01220-201ENST00000558575 DCP1AQ9NPI6 582 aaPredicted RBP18.63■□□□□ 0.57
LINC01220-201ENST00000558575 BIN2Q9UBW5 565 aaPredicted RBP18.63■□□□□ 0.57
LINC01220-201ENST00000558575 SAP30BPQ9UHR5 308 aaKnown RBP18.63■□□□□ 0.57
LINC01220-201ENST00000558575 TTC28Q96AY4 2481 aa18.62■□□□□ 0.57
LINC01220-201ENST00000558575 A0A0D9SFI3 127 aa18.62■□□□□ 0.57
LINC01220-201ENST00000558575 BMP8BP34820 402 aa18.62■□□□□ 0.57
LINC01220-201ENST00000558575 UBXN2AP68543 259 aa18.62■□□□□ 0.57
LINC01220-201ENST00000558575 EVX2Q03828 476 aa18.62■□□□□ 0.57
LINC01220-201ENST00000558575 CCDC129Q6ZRS4 1044 aa18.62■□□□□ 0.57
LINC01220-201ENST00000558575 ZKSCAN4Q969J2 545 aaPredicted RBP18.62■□□□□ 0.57
LINC01220-201ENST00000558575 COL2A1P02458 1487 aaPredicted RBP18.61■□□□□ 0.57
LINC01220-201ENST00000558575 GSG1L2A8MUP6 293 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 SMIM22K7EJ46 135 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 FOXP2O15409 715 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 HOXD10P28358 340 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 PPIL2Q13356 520 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.61■□□□□ 0.57
LINC01220-201ENST00000558575 HELLSQ9NRZ9 838 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 ZNF112Q9UJU3 913 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 GABRQQ9UN88 632 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 SLC4A4Q9Y6R1 1079 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 MYH7P12883 1935 aa18.61■□□□□ 0.57
LINC01220-201ENST00000558575 FAM196BA6NMK8 535 aa18.6■□□□□ 0.57
LINC01220-201ENST00000558575 PHF20L1A8MW92 1017 aa18.6■□□□□ 0.57
LINC01220-201ENST00000558575 TBC1D12O60347 775 aa18.6■□□□□ 0.57
LINC01220-201ENST00000558575 PLCD1P51178 756 aa18.6■□□□□ 0.57
LINC01220-201ENST00000558575 RRP1BQ14684 758 aaKnown RBP18.6■□□□□ 0.57
LINC01220-201ENST00000558575 METTL16Q86W50 562 aaKnown RBP18.6■□□□□ 0.57
LINC01220-201ENST00000558575 WRNIP1Q96S55 665 aa18.6■□□□□ 0.57
LINC01220-201ENST00000558575 DHX36Q9H2U1 1008 aaKnown RBP18.6■□□□□ 0.57
LINC01220-201ENST00000558575 ATP8A2Q9NTI2 1148 aa18.6■□□□□ 0.57
LINC01220-201ENST00000558575 PI4KBQ9UBF8 816 aa18.6■□□□□ 0.57
LINC01220-201ENST00000558575 CYP2D6P10635 497 aa18.59■□□□□ 0.57
LINC01220-201ENST00000558575 LRIT3Q3SXY7 679 aa18.59■□□□□ 0.57
LINC01220-201ENST00000558575 MCMDC2Q4G0Z9 681 aa18.59■□□□□ 0.57
LINC01220-201ENST00000558575 ZNF589Q86UQ0 364 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms