RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ADAM30Q9UKF2 790 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 CNTNAP4Q9C0A0 1308 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 PRR36Q9H6K5 1346 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 WRNQ14191 1432 aaPredicted RBP eCLIP4.75□□□□□ -1.65
HERC1-203ENST00000558532 GREM1O60565 184 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 BPNT1O95861 308 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 CST3P01034 146 aaPredicted RBP4.75□□□□□ -1.65
HERC1-203ENST00000558532 EIF4A3P38919 411 aaKnown RBP4.75□□□□□ -1.65
HERC1-203ENST00000558532 CRKP46108 304 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 MPP2Q14168 576 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 REC114Q7Z4M0 266 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 TMEM87BQ96K49 555 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 MIPEPQ99797 713 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 DPH2Q9BQC3 489 aaPredicted RBP4.75□□□□□ -1.65
HERC1-203ENST00000558532 LRRC3Q9BY71 257 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 MKNK2Q9HBH9 465 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 BSDC1Q9NW68 430 aaPredicted RBP4.75□□□□□ -1.65
HERC1-203ENST00000558532 KIAA1522Q9P206 1035 aaPredicted RBP4.75□□□□□ -1.65
HERC1-203ENST00000558532 PLAGL2Q9UPG8 496 aa4.75□□□□□ -1.65
HERC1-203ENST00000558532 RB1CC1Q8TDY2 1594 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 IGF2BP3O00425 579 aaKnown RBP eCLIP4.74□□□□□ -1.65
HERC1-203ENST00000558532 TLR3O15455 904 aaKnown RBP4.74□□□□□ -1.65
HERC1-203ENST00000558532 GRIN3BO60391 1043 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 CEACAM5P06731 702 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 ZNF76P36508 570 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 GP2P55259 537 aaKnown RBP4.74□□□□□ -1.65
HERC1-203ENST00000558532 PDE4BQ07343 736 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 TMEM201Q5SNT2 666 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 NBPF11Q86T75 865 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 VSIG10LQ86VR7 867 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 MCATQ8IVS2 390 aaKnown RBP4.74□□□□□ -1.65
HERC1-203ENST00000558532 MFSD2AQ8NA29 543 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 RIN3Q8TB24 985 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 NETO1Q8TDF5 533 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 XAGE3Q8WTP9 111 aa4.74□□□□□ -1.65
HERC1-203ENST00000558532 MRRFQ96E11 262 aaKnown RBP4.74□□□□□ -1.65
HERC1-203ENST00000558532 METTL5Q9NRN9 209 aaKnown RBP4.74□□□□□ -1.65
HERC1-203ENST00000558532 SUPT16HQ9Y5B9 1047 aaKnown RBP4.74□□□□□ -1.65
HERC1-203ENST00000558532 OAS3Q9Y6K5 1087 aaKnown RBP4.74□□□□□ -1.65
HERC1-203ENST00000558532 EIF4G1Q04637 1599 aaKnown RBP4.74□□□□□ -1.65
HERC1-203ENST00000558532 DNAJA2O60884 412 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 HTR3BO95264 441 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 WNT11O96014 354 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 PLCG1P19174 1290 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 ITIH2P19823 946 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 IFI16Q16666 785 aaKnown RBP4.73□□□□□ -1.65
HERC1-203ENST00000558532 ZNF394Q53GI3 561 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 SLC6A19Q695T7 634 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 LETMD1Q6P1Q0 360 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 SPACA3Q8IXA5 215 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 ZNF296Q8WUU4 475 aaPredicted RBP4.73□□□□□ -1.65
HERC1-203ENST00000558532 BCL7CQ8WUZ0 217 aaPredicted RBP4.73□□□□□ -1.65
HERC1-203ENST00000558532 TNKS2Q9H2K2 1166 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 PRDM5Q9NQX1 630 aaPredicted RBP4.73□□□□□ -1.65
HERC1-203ENST00000558532 UBP1Q9NZI7 540 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 REV1Q9UBZ9 1251 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 MAPK8IP1Q9UQF2 711 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 PCDHGB7Q9Y5F8 929 aa4.73□□□□□ -1.65
HERC1-203ENST00000558532 PRR33A8MZF0 331 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 UPK3BL1B0FP48 263 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 UPK3BL2E5RIL1 263 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 NKPD1Q17RQ9 610 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 DIEXFQ68CQ4 756 aaKnown RBP4.72□□□□□ -1.65
HERC1-203ENST00000558532 ZNF574Q6ZN55 896 aaPredicted RBP4.72□□□□□ -1.65
HERC1-203ENST00000558532 C22orf34Q6ZV56 151 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 METTL16Q86W50 562 aaKnown RBP4.72□□□□□ -1.65
HERC1-203ENST00000558532 DNAJB8Q8NHS0 232 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 PPP1R13LQ8WUF5 828 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 EAF1Q96JC9 268 aaPredicted RBP4.72□□□□□ -1.65
HERC1-203ENST00000558532 BRMS1Q9HCU9 246 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 PAK6Q9NQU5 681 aaPredicted RBP4.72□□□□□ -1.65
HERC1-203ENST00000558532 GTF2IRD1Q9UHL9 959 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 ANGEL1Q9UNK9 670 aaKnown RBP4.72□□□□□ -1.65
HERC1-203ENST00000558532 CCDC9Q9Y3X0 531 aaKnown RBP4.72□□□□□ -1.65
HERC1-203ENST00000558532 ROBO2Q9HCK4 1378 aa4.72□□□□□ -1.65
HERC1-203ENST00000558532 SCAMP3O14828 347 aaKnown RBP4.71□□□□□ -1.66
HERC1-203ENST00000558532 ZNF865P0CJ78 1059 aaPredicted RBP4.71□□□□□ -1.66
HERC1-203ENST00000558532 RACK1P63244 317 aaKnown RBP4.71□□□□□ -1.66
HERC1-203ENST00000558532 CWF19L2Q2TBE0 894 aaKnown RBP4.71□□□□□ -1.66
HERC1-203ENST00000558532 SPRED2Q7Z698 418 aa4.71□□□□□ -1.66
HERC1-203ENST00000558532 USP48Q86UV5 1035 aa4.71□□□□□ -1.66
HERC1-203ENST00000558532 SLFN12Q8IYM2 578 aa4.71□□□□□ -1.66
HERC1-203ENST00000558532 ABI1Q8IZP0 508 aa4.71□□□□□ -1.66
HERC1-203ENST00000558532 FAM13CQ8NE31 585 aa4.71□□□□□ -1.66
HERC1-203ENST00000558532 FLCNQ8NFG4 579 aa4.71□□□□□ -1.66
HERC1-203ENST00000558532 CYB5D2Q8WUJ1 264 aa4.71□□□□□ -1.66
HERC1-203ENST00000558532 RNF34Q969K3 372 aa4.71□□□□□ -1.66
HERC1-203ENST00000558532 NT5C1AQ9BXI3 368 aa4.71□□□□□ -1.66
HERC1-203ENST00000558532 TPX2Q9ULW0 747 aaKnown RBP4.71□□□□□ -1.66
HERC1-203ENST00000558532 COL17A1Q9UMD9 1497 aaPredicted RBP4.7□□□□□ -1.66
HERC1-203ENST00000558532 CHURC1-FNTBB4DL54 471 aa4.7□□□□□ -1.66
HERC1-203ENST00000558532 ATE1O95260 518 aa4.7□□□□□ -1.66
HERC1-203ENST00000558532 CD96P40200 585 aa4.7□□□□□ -1.66
HERC1-203ENST00000558532 HDLBPQ00341 1268 aaKnown RBP4.7□□□□□ -1.66
HERC1-203ENST00000558532 PRKCQQ04759 706 aa4.7□□□□□ -1.66
HERC1-203ENST00000558532 BNIP3Q12983 259 aa4.7□□□□□ -1.66
HERC1-203ENST00000558532 SFRP5Q5T4F7 317 aa4.7□□□□□ -1.66
HERC1-203ENST00000558532 ARHGAP27Q6ZUM4 889 aa4.7□□□□□ -1.66
HERC1-203ENST00000558532 CDH24Q86UP0 819 aa4.7□□□□□ -1.66
HERC1-203ENST00000558532 KIAA0825Q8IV33 1275 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms