RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 PEX10O60683 326 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 MAPK4P31152 587 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 ATN1P54259 1190 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-207ENST00000558500 IRX3P78415 501 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-207ENST00000558500 EXOSC9Q06265 439 aaKnown RBP8.44□□□□□ -1.06
LRRC28-207ENST00000558500 PICALMQ13492 652 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 PDE3AQ14432 1141 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 CCL14Q16627 93 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 C9orf50Q5SZB4 431 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 GPRC5AQ8NFJ5 357 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 P2RX7Q99572 595 aaKnown RBP8.44□□□□□ -1.06
LRRC28-207ENST00000558500 TBC1D2Q9BYX2 928 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 PRKRIP1Q9H875 184 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-207ENST00000558500 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.44□□□□□ -1.06
LRRC28-207ENST00000558500 TXNRD2Q9NNW7 524 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 RYDENQ9NUL5 291 aaKnown RBP8.44□□□□□ -1.06
LRRC28-207ENST00000558500 GNL3LQ9NVN8 582 aaKnown RBP8.44□□□□□ -1.06
LRRC28-207ENST00000558500 BDP1A6H8Y1 2624 aa8.44□□□□□ -1.06
LRRC28-207ENST00000558500 TMEM265A0A087WTH1 108 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 USP17L5A8MUK1 530 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 EYA2O00167 538 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 SEMA3EO15041 775 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 HOXA7P31268 230 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-207ENST00000558500 PLA2G5P39877 138 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 RGS2P41220 211 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 BTDP43251 543 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 PSEN1P49768 467 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 RTP1P59025 263 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 MORN1Q5T089 497 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 GPR142Q7Z601 462 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 FAM163AQ96GL9 167 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-207ENST00000558500 APBA2Q99767 749 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 RBPJLQ9UBG7 517 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 DENND2AQ9ULE3 1009 aa8.43□□□□□ -1.06
LRRC28-207ENST00000558500 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.42□□□□□ -1.06
LRRC28-207ENST00000558500 DNM1LO00429 736 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 CAP2P40123 477 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 RFX5P48382 616 aaPredicted RBP8.42□□□□□ -1.06
LRRC28-207ENST00000558500 HERVK_113P62684 666 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 RRP1BQ14684 758 aaKnown RBP8.42□□□□□ -1.06
LRRC28-207ENST00000558500 Q3C1V9 767 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 ATG9AQ7Z3C6 839 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 PLEKHH3Q7Z736 793 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 SLF2Q8IX21 1173 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 ZGPATQ8N5A5 531 aaKnown RBP8.42□□□□□ -1.06
LRRC28-207ENST00000558500 USP38Q8NB14 1042 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 BADQ92934 168 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 FAM122AQ96E09 287 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 ZFP91Q96JP5 570 aaPredicted RBP8.42□□□□□ -1.06
LRRC28-207ENST00000558500 WDR18Q9BV38 432 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 PORCNQ9H237 461 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 AS3MTQ9HBK9 375 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 DDX20Q9UHI6 824 aaKnown RBP8.42□□□□□ -1.06
LRRC28-207ENST00000558500 ATP11BQ9Y2G3 1177 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 MUC3AQ02505 3323 aa8.42□□□□□ -1.06
LRRC28-207ENST00000558500 MROH7-TTC4A0A0A0MT08 1334 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 GPR75-ASB3A0A0A6YYF3 556 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 MSCO60682 206 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 PHKA1P46020 1223 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 BACE1P56817 501 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 RHBDL3P58872 404 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 ERVK-9P63128 1117 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 ERVK-24P63145 666 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 MAP2K5Q13163 448 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 MTMR2Q13614 643 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 ATP2B3Q16720 1220 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 MFSD14CQ5VZR4 134 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 DZIP1Q86YF9 867 aaKnown RBP8.41□□□□□ -1.06
LRRC28-207ENST00000558500 CCAR1Q8IX12 1150 aaKnown RBP8.41□□□□□ -1.06
LRRC28-207ENST00000558500 SLC39A7Q92504 469 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 LPAR1Q92633 364 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 EDC3Q96F86 508 aaKnown RBP8.41□□□□□ -1.06
LRRC28-207ENST00000558500 PRDM5Q9NQX1 630 aaPredicted RBP8.41□□□□□ -1.06
LRRC28-207ENST00000558500 TMOD4Q9NZQ9 345 aa8.41□□□□□ -1.06
LRRC28-207ENST00000558500 LAMA2P24043 3122 aaKnown RBP8.4□□□□□ -1.06
LRRC28-207ENST00000558500 GRIN2CQ14957 1233 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 POTEEQ6S8J3 1075 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 SLC39A5Q6ZMH5 540 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 WDR63Q8IWG1 891 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 GTF3C2Q8WUA4 911 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-207ENST00000558500 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 PDLIM7Q9NR12 457 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 FLRT1Q9NZU1 646 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 ABCF2Q9UG63 623 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 STK24Q9Y6E0 443 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 DOCK3Q8IZD9 2030 aa8.4□□□□□ -1.06
LRRC28-207ENST00000558500 EYSQ5T1H1 3165 aa8.4□□□□□ -1.07
LRRC28-207ENST00000558500 CDH23Q9H251 3354 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 PRUNE2Q8WUY3 3088 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 DOCK1Q14185 1865 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 PDS5AQ29RF7 1337 aaKnown RBP8.39□□□□□ -1.07
LRRC28-207ENST00000558500 TRIM43BA6NCK2 446 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 C19orf81C9J6K1 198 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 MAP4K4O95819 1239 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-207ENST00000558500 CNGA1P29973 690 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 JAG1P78504 1218 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 MECOMQ03112 1051 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 RASGRF1Q13972 1273 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 SNX17Q15036 470 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 TRIM60Q495X7 471 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms