RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 CASP1P29466 404 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 CDC25AP30304 524 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 ASIC1P78348 528 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 SPA17Q15506 151 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 UBE2Q2LH0YL09 131 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 EIF3JO75822 258 aaKnown RBP17.53■□□□□ 0.4
AP4E1-202ENST00000558439 MATR3P43243 847 aaKnown RBP eCLIP17.53■□□□□ 0.4
AP4E1-202ENST00000558439 NCBP1Q09161 790 aaKnown RBP17.53■□□□□ 0.4
AP4E1-202ENST00000558439 CCDC96Q2M329 555 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 FKBP15Q5T1M5 1219 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 SARM1Q6SZW1 724 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 TPTE2Q6XPS3 522 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 DTHD1Q6ZMT9 781 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.53■□□□□ 0.4
AP4E1-202ENST00000558439 PALLDQ8WX93 1383 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 LOC102724428A0A0B4J2F2 783 aa17.52■□□□□ 0.4
AP4E1-202ENST00000558439 PPP6R2O75170 966 aa17.52■□□□□ 0.4
AP4E1-202ENST00000558439 SIK1P57059 783 aa17.52■□□□□ 0.4
AP4E1-202ENST00000558439 SPTY2D1Q68D10 685 aaPredicted RBP17.52■□□□□ 0.4
AP4E1-202ENST00000558439 ZSCAN10Q96SZ4 725 aaPredicted RBP17.52■□□□□ 0.4
AP4E1-202ENST00000558439 IL6STP40189 918 aaPredicted RBP17.52■□□□□ 0.4
AP4E1-202ENST00000558439 PPP2R3AQ06190 1150 aa17.52■□□□□ 0.4
AP4E1-202ENST00000558439 LEKR1Q6ZMV7 388 aa17.52■□□□□ 0.4
AP4E1-202ENST00000558439 SAMSN1Q9NSI8 373 aaKnown RBP17.52■□□□□ 0.4
AP4E1-202ENST00000558439 GNPATO15228 680 aa17.52■□□□□ 0.39
AP4E1-202ENST00000558439 PICALMQ13492 652 aa17.52■□□□□ 0.39
AP4E1-202ENST00000558439 LETM2Q2VYF4 491 aa17.52■□□□□ 0.39
AP4E1-202ENST00000558439 SRRTQ9BXP5 876 aaKnown RBP17.52■□□□□ 0.39
AP4E1-202ENST00000558439 BMP2KQ9NSY1 1161 aaPredicted RBP17.52■□□□□ 0.39
AP4E1-202ENST00000558439 KDM6AO15550 1401 aaPredicted RBP17.51■□□□□ 0.39
AP4E1-202ENST00000558439 IFNAR1P17181 557 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 CACNA2D4Q7Z3S7 1137 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 UIMC1Q96RL1 719 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 ZNF335Q9H4Z2 1342 aaPredicted RBP17.51■□□□□ 0.39
AP4E1-202ENST00000558439 C3P01024 1663 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 TMEM232C9JQI7 657 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 FMNL1O95466 1100 aaPredicted RBP17.51■□□□□ 0.39
AP4E1-202ENST00000558439 LDHCP07864 332 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 CALML3P27482 149 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 GUCY1A2P33402 732 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 TFAP4Q01664 338 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 EPSTI1Q96J88 318 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 C8orf37Q96NL8 207 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 JADE2Q9NQC1 790 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 RBM28Q9NW13 759 aaKnown RBP17.51■□□□□ 0.39
AP4E1-202ENST00000558439 RMND1Q9NWS8 449 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 PPP2R2CQ9Y2T4 447 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 PSMA7O14818 248 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 PHACTR2O75167 634 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 LDHBP07195 334 aaKnown RBP17.51■□□□□ 0.39
AP4E1-202ENST00000558439 PTGDRQ13258 359 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 TDRD12Q587J7 1177 aaKnown RBP17.51■□□□□ 0.39
AP4E1-202ENST00000558439 SMARCC1Q92922 1105 aaPredicted RBP17.51■□□□□ 0.39
AP4E1-202ENST00000558439 EXOC1Q9NV70 894 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 MEGF6O75095 1541 aa17.51■□□□□ 0.39
AP4E1-202ENST00000558439 MMP1P03956 469 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 SPAG1Q07617 926 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 SYMPKQ92797 1274 aaKnown RBP17.5■□□□□ 0.39
AP4E1-202ENST00000558439 GTPBP4Q9BZE4 634 aaKnown RBP17.5■□□□□ 0.39
AP4E1-202ENST00000558439 PEAK1Q9H792 1746 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 RFX7Q2KHR2 1363 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 CTAGE9A4FU28 777 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 LMAN1P49257 510 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 SHC4Q6S5L8 630 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 OXER1Q8TDS5 423 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 CALML4Q96GE6 196 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 CAPZA3Q96KX2 299 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 GPKOWQ92917 476 aaPredicted RBP eCLIP17.5■□□□□ 0.39
AP4E1-202ENST00000558439 TUBB4AP04350 444 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 GOLGA1Q92805 767 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
AP4E1-202ENST00000558439 MAN1B1Q9UKM7 699 aa17.5■□□□□ 0.39
AP4E1-202ENST00000558439 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
AP4E1-202ENST00000558439 CRACR2BQ8N4Y2 399 aaPredicted RBP17.49■□□□□ 0.39
AP4E1-202ENST00000558439 LY9Q9HBG7 655 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 KRT9P35527 623 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 EIF6P56537 245 aaKnown RBP17.49■□□□□ 0.39
AP4E1-202ENST00000558439 FAM98CQ17RN3 349 aaKnown RBP17.49■□□□□ 0.39
AP4E1-202ENST00000558439 CTAGE15A4D2H0 777 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 IKBKBO14920 756 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 CTAGE8P0CG41 777 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 LIFRP42702 1097 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 CASP7P55210 303 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 CTAGE6Q86UF2 777 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 CTAGE4Q8IX94 777 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 RASGRP4Q8TDF6 673 aa17.49■□□□□ 0.39
AP4E1-202ENST00000558439 ENGASEQ8NFI3 743 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 TIGD1Q96MW7 591 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 HPS5Q9UPZ3 1129 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 LUC7L2Q9Y383 392 aaKnown RBP17.48■□□□□ 0.39
AP4E1-202ENST00000558439 UBN2Q6ZU65 1347 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
AP4E1-202ENST00000558439 SMIM5Q71RC9 77 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 DPF2Q92785 391 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 SLF1Q9BQI6 1058 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 PYM1Q9BRP8 204 aaKnown RBP17.48■□□□□ 0.39
AP4E1-202ENST00000558439 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
AP4E1-202ENST00000558439 MON2Q7Z3U7 1717 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 GNAQP50148 359 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms