RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CPA4Q9UI42 421 aa12.34□□□□□ -0.43
TPM1-212ENST00000558347 DDX60LQ5H9U9 1706 aaKnown RBP12.33□□□□□ -0.43
TPM1-212ENST00000558347 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 CYP2C8P10632 490 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 PDE6AP16499 860 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 USP5P45974 858 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 MFAP1P55081 439 aaKnown RBP12.33□□□□□ -0.44
TPM1-212ENST00000558347 LACTBP83111 547 aaPredicted RBP12.33□□□□□ -0.44
TPM1-212ENST00000558347 MLLT1Q03111 559 aaPredicted RBP12.33□□□□□ -0.44
TPM1-212ENST00000558347 SHROOM1Q2M3G4 852 aaPredicted RBP12.33□□□□□ -0.44
TPM1-212ENST00000558347 TTC22Q5TAA0 569 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 SLC9C2Q5TAH2 1124 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 TMED8Q6PL24 325 aaPredicted RBP12.33□□□□□ -0.44
TPM1-212ENST00000558347 GADL1Q6ZQY3 521 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 CERS3Q8IU89 383 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 LOC285556D6RIA3 1793 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 ZNF532Q9HCE3 1301 aa12.33□□□□□ -0.44
TPM1-212ENST00000558347 TCRBV5S4A2TA0A5A2 114 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
TPM1-212ENST00000558347 GDF11O95390 407 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 ATP5JP18859 108 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 CTGFP29279 349 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
TPM1-212ENST00000558347 FOXP4Q8IVH2 680 aaPredicted RBP12.32□□□□□ -0.44
TPM1-212ENST00000558347 HSCBQ8IWL3 235 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 PARK7Q99497 189 aaKnown RBP12.32□□□□□ -0.44
TPM1-212ENST00000558347 PAG1Q9NWQ8 432 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 CHMP5Q9NZZ3 219 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 NAV1Q8NEY1 1877 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 HLA-DOAP06340 250 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 SPP2Q13103 211 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 CRACR2BQ8N4Y2 399 aaPredicted RBP12.32□□□□□ -0.44
TPM1-212ENST00000558347 ZNF280CQ8ND82 737 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 GPATCH3Q96I76 525 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 HAUS7Q99871 368 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 ECHDC1Q9NTX5 307 aa12.32□□□□□ -0.44
TPM1-212ENST00000558347 USP17L5A8MUK1 530 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 ERC2O15083 957 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 CHGBP05060 677 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 BCRP11274 1271 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 GSPT1P15170 499 aaKnown RBP12.31□□□□□ -0.44
TPM1-212ENST00000558347 HMGCS2P54868 508 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 KIF22Q14807 665 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 LCORLQ8N3X6 602 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 PI4K2BQ8TCG2 481 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 TRIM34Q9BYJ4 488 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 SLKQ9H2G2 1235 aaPredicted RBP12.31□□□□□ -0.44
TPM1-212ENST00000558347 AGTPBP1Q9UPW5 1226 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 SLC45A1Q9Y2W3 748 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 PTCH2Q9Y6C5 1203 aa12.31□□□□□ -0.44
TPM1-212ENST00000558347 MYH7P12883 1935 aa12.3□□□□□ -0.44
TPM1-212ENST00000558347 GLRX3O76003 335 aaKnown RBP12.3□□□□□ -0.44
TPM1-212ENST00000558347 ADD2P35612 726 aa12.3□□□□□ -0.44
TPM1-212ENST00000558347 EVX2Q03828 476 aa12.3□□□□□ -0.44
TPM1-212ENST00000558347 ARHGEF6Q15052 776 aa12.3□□□□□ -0.44
TPM1-212ENST00000558347 PROCA1Q8NCQ7 364 aaPredicted RBP12.3□□□□□ -0.44
TPM1-212ENST00000558347 TRIM47Q96LD4 638 aa12.3□□□□□ -0.44
TPM1-212ENST00000558347 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
TPM1-212ENST00000558347 MGAMO43451 1857 aa12.3□□□□□ -0.44
TPM1-212ENST00000558347 MKI67P46013 3256 aaKnown RBP12.29□□□□□ -0.44
TPM1-212ENST00000558347 ASNSP08243 561 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 PSMC4P43686 418 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 PLCD1P51178 756 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 SH3D19Q5HYK7 790 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 TSHZ3Q63HK5 1081 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 TATDN1Q6P1N9 297 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 SDR42E1Q8WUS8 393 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 ARMC5Q96C12 935 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 WDR18Q9BV38 432 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 EHD4Q9H223 541 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 ARMT1Q9H993 441 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 AS3MTQ9HBK9 375 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 ZBTB21Q9ULJ3 1066 aa12.29□□□□□ -0.44
TPM1-212ENST00000558347 OSBPP22059 807 aa12.28□□□□□ -0.44
TPM1-212ENST00000558347 MTMR2Q13614 643 aa12.28□□□□□ -0.44
TPM1-212ENST00000558347 L1TD1Q5T7N2 865 aaKnown RBP12.28□□□□□ -0.44
TPM1-212ENST00000558347 TTC6Q86TZ1 520 aa12.28□□□□□ -0.44
TPM1-212ENST00000558347 CRNKL1Q9BZJ0 848 aaKnown RBP12.28□□□□□ -0.44
TPM1-212ENST00000558347 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
TPM1-212ENST00000558347 RBBP6Q7Z6E9 1792 aaKnown RBP12.28□□□□□ -0.44
TPM1-212ENST00000558347 POTEFA5A3E0 1075 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 PRKAB2O43741 272 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 MBD4O95243 580 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.44
TPM1-212ENST00000558347 GNRH1P01148 92 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 GH2P01242 217 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 SDSP20132 328 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 SHMT1P34896 483 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 BACE1P56817 501 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 SLC9C1Q4G0N8 1177 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 SMCR8Q8TEV9 937 aaPredicted RBP12.27□□□□□ -0.44
TPM1-212ENST00000558347 ZNF333Q96JL9 665 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.27□□□□□ -0.44
TPM1-212ENST00000558347 DCP1AQ9NPI6 582 aaPredicted RBP12.27□□□□□ -0.44
TPM1-212ENST00000558347 GINM1Q9NU53 330 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 MCM9Q9NXL9 1143 aa12.27□□□□□ -0.44
TPM1-212ENST00000558347 BAZ2AQ9UIF9 1905 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms