RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 TRIB2Q92519 343 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 FRAT1Q92837 279 aaPredicted RBP13.11□□□□□ -0.31
SHF-203ENST00000558294 CLUAP1Q96AJ1 413 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
SHF-203ENST00000558294 DBNDD2Q9BQY9 259 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 HMX1Q9NP08 348 aaPredicted RBP13.11□□□□□ -0.31
SHF-203ENST00000558294 STAP2Q9UGK3 403 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 PEX10O60683 326 aa13.1□□□□□ -0.31
SHF-203ENST00000558294 HERVK_113P62684 666 aa13.1□□□□□ -0.31
SHF-203ENST00000558294 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
SHF-203ENST00000558294 CCDC158Q5M9N0 1113 aa13.1□□□□□ -0.31
SHF-203ENST00000558294 MAP3K21Q5TCX8 1036 aa13.1□□□□□ -0.31
SHF-203ENST00000558294 FOXP4Q8IVH2 680 aaPredicted RBP13.1□□□□□ -0.31
SHF-203ENST00000558294 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
SHF-203ENST00000558294 NBPF3Q9H094 633 aa13.1□□□□□ -0.31
SHF-203ENST00000558294 TXNRD2Q9NNW7 524 aa13.1□□□□□ -0.31
SHF-203ENST00000558294 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
SHF-203ENST00000558294 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
SHF-203ENST00000558294 C19orf81C9J6K1 198 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 IGSF3O75054 1194 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 GDF11O95390 407 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 CYP2B6P20813 491 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 CRACR2BQ8N4Y2 399 aaPredicted RBP13.09□□□□□ -0.31
SHF-203ENST00000558294 GPRC5AQ8NFJ5 357 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 SSH3Q8TE77 659 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
SHF-203ENST00000558294 GDF15Q99988 308 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 OGDHLQ9ULD0 1010 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 ZBTB21Q9ULJ3 1066 aa13.09□□□□□ -0.31
SHF-203ENST00000558294 XRCC5P13010 732 aaKnown RBP13.08□□□□□ -0.32
SHF-203ENST00000558294 BMP8BP34820 402 aa13.08□□□□□ -0.32
SHF-203ENST00000558294 ZAP70P43403 619 aa13.08□□□□□ -0.32
SHF-203ENST00000558294 SOCS4Q8WXH5 440 aa13.08□□□□□ -0.32
SHF-203ENST00000558294 LRCH3Q96II8 777 aa13.08□□□□□ -0.32
SHF-203ENST00000558294 NUDT12Q9BQG2 462 aa13.08□□□□□ -0.32
SHF-203ENST00000558294 TRIM34Q9BYJ4 488 aa13.08□□□□□ -0.32
SHF-203ENST00000558294 C11orf49Q9H6J7 331 aa13.08□□□□□ -0.32
SHF-203ENST00000558294 PIH1D3Q9NQM4 214 aaKnown RBP13.08□□□□□ -0.32
SHF-203ENST00000558294 RBPJLQ9UBG7 517 aa13.08□□□□□ -0.32
SHF-203ENST00000558294 LAMA3Q16787 3333 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 HLA-DOAP06340 250 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
SHF-203ENST00000558294 MAPK4P31152 587 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 ERVK-24P63145 666 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
SHF-203ENST00000558294 ATP8B2P98198 1209 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
SHF-203ENST00000558294 Q3C1V9 767 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 POTEEQ6S8J3 1075 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 USP6NLQ92738 828 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
SHF-203ENST00000558294 SAP30BPQ9UHR5 308 aaKnown RBP13.07□□□□□ -0.32
SHF-203ENST00000558294 ZMYND8Q9ULU4 1186 aaPredicted RBP13.07□□□□□ -0.32
SHF-203ENST00000558294 MYH1P12882 1939 aa13.06□□□□□ -0.32
SHF-203ENST00000558294 SURF6O75683 361 aaKnown RBP13.06□□□□□ -0.32
SHF-203ENST00000558294 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
SHF-203ENST00000558294 MORN1Q5T089 497 aa13.06□□□□□ -0.32
SHF-203ENST00000558294 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
SHF-203ENST00000558294 GPR142Q7Z601 462 aa13.06□□□□□ -0.32
SHF-203ENST00000558294 TRMT44Q8IYL2 757 aaKnown RBP13.06□□□□□ -0.32
SHF-203ENST00000558294 GTF3C2Q8WUA4 911 aaPredicted RBP13.06□□□□□ -0.32
SHF-203ENST00000558294 C12orf42Q96LP6 360 aa13.06□□□□□ -0.32
SHF-203ENST00000558294 PORCNQ9H237 461 aa13.06□□□□□ -0.32
SHF-203ENST00000558294 C1orf115Q9H7X2 142 aa13.06□□□□□ -0.32
SHF-203ENST00000558294 TLR7Q9NYK1 1049 aaKnown RBP13.06□□□□□ -0.32
SHF-203ENST00000558294 DBNLQ9UJU6 430 aaKnown RBP13.06□□□□□ -0.32
SHF-203ENST00000558294 NOP58Q9Y2X3 529 aaKnown RBP13.06□□□□□ -0.32
SHF-203ENST00000558294 PFASO15067 1338 aa13.06□□□□□ -0.32
SHF-203ENST00000558294 GH2P01242 217 aa13.05□□□□□ -0.32
SHF-203ENST00000558294 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
SHF-203ENST00000558294 CYP7A1P22680 504 aa13.05□□□□□ -0.32
SHF-203ENST00000558294 RGS2P41220 211 aa13.05□□□□□ -0.32
SHF-203ENST00000558294 CACNB2Q08289 660 aaPredicted RBP13.05□□□□□ -0.32
SHF-203ENST00000558294 CCL14Q16627 93 aa13.05□□□□□ -0.32
SHF-203ENST00000558294 TATDN1Q6P1N9 297 aa13.05□□□□□ -0.32
SHF-203ENST00000558294 USP17L2Q6R6M4 530 aa13.05□□□□□ -0.32
SHF-203ENST00000558294 PAGR1Q9BTK6 254 aa13.05□□□□□ -0.32
SHF-203ENST00000558294 COL6A3P12111 3177 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 CNMDO75829 334 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 IDH1O75874 414 aaKnown RBP13.04□□□□□ -0.32
SHF-203ENST00000558294 COL6A1P12109 1028 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 SYN1P17600 705 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 CCND3P30281 292 aaPredicted RBP13.04□□□□□ -0.32
SHF-203ENST00000558294 MAGEA10P43363 369 aaPredicted RBP13.04□□□□□ -0.32
SHF-203ENST00000558294 LHX8Q68G74 356 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 PLEKHH3Q7Z736 793 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 CERS3Q8IU89 383 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 MIGA1Q8NAN2 632 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 EAF2Q96CJ1 260 aaPredicted RBP13.04□□□□□ -0.32
SHF-203ENST00000558294 APBA2Q99767 749 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 CCDC8Q9H0W5 538 aaPredicted RBP13.04□□□□□ -0.32
SHF-203ENST00000558294 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
SHF-203ENST00000558294 USP5P45974 858 aa13.03□□□□□ -0.32
SHF-203ENST00000558294 LRIT3Q3SXY7 679 aa13.03□□□□□ -0.32
SHF-203ENST00000558294 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms