RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 PPP2R3BQ9Y5P8 575 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 WIPF1O43516 503 aa9.36□□□□□ -0.91
SPG11-205ENST00000558080 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
SPG11-205ENST00000558080 IL15P40933 162 aaPredicted RBP9.36□□□□□ -0.91
SPG11-205ENST00000558080 WNT7BP56706 349 aa9.36□□□□□ -0.91
SPG11-205ENST00000558080 MDM2Q00987 491 aaPredicted RBP9.36□□□□□ -0.91
SPG11-205ENST00000558080 DGKZQ13574 1117 aa9.36□□□□□ -0.91
SPG11-205ENST00000558080 HLA-CQ95604 372 aa9.36□□□□□ -0.91
SPG11-205ENST00000558080 CLMNQ96JQ2 1002 aa9.36□□□□□ -0.91
SPG11-205ENST00000558080 TRIM47Q96LD4 638 aa9.36□□□□□ -0.91
SPG11-205ENST00000558080 COPRSQ9NQ92 184 aa9.36□□□□□ -0.91
SPG11-205ENST00000558080 SAGE1Q9NXZ1 904 aa9.36□□□□□ -0.91
SPG11-205ENST00000558080 CCDC85CA6NKD9 419 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 SRGAP3O43295 1099 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 USP2O75604 605 aaPredicted RBP9.35□□□□□ -0.91
SPG11-205ENST00000558080 TBC1D8O95759 1140 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 ADORA1P30542 326 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 PHKA1P46020 1223 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 CACNB3P54284 484 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 SKOR1P84550 965 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 HDLBPQ00341 1268 aaKnown RBP9.35□□□□□ -0.91
SPG11-205ENST00000558080 TNFAIP1Q13829 316 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 PDE4DIPQ5VU43 2346 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 ZKSCAN2Q63HK3 967 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 WDR66Q8TBY9 1149 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 TEKT1Q969V4 418 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 MCOLN1Q9GZU1 580 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 TMEM39BQ9GZU3 492 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 GNL3LQ9NVN8 582 aaKnown RBP9.35□□□□□ -0.91
SPG11-205ENST00000558080 DOCK2Q92608 1830 aa9.35□□□□□ -0.91
SPG11-205ENST00000558080 MAST3O60307 1309 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 CDK5RAP2Q96SN8 1893 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 GNAI2P04899 355 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 SNRPBP14678 240 aaKnown RBP9.34□□□□□ -0.91
SPG11-205ENST00000558080 IREB2P48200 963 aaKnown RBP9.34□□□□□ -0.91
SPG11-205ENST00000558080 TM4SF4P48230 202 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 TNNI2P48788 182 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 TIMM10P62072 90 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 TFCP2Q12800 502 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 MAP3K11Q16584 847 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 TMEM57Q8N5G2 664 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 HPS1Q92902 700 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 WNK4Q96J92 1243 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 ZDHHC15Q96MV8 337 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 TEPSINQ96N21 525 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 SUGT1Q9Y2Z0 365 aa9.34□□□□□ -0.91
SPG11-205ENST00000558080 PNMA6EA0A0J9YXQ4 647 aa9.33□□□□□ -0.92
SPG11-205ENST00000558080 SREBF2Q12772 1141 aa9.33□□□□□ -0.92
SPG11-205ENST00000558080 MTX1Q13505 466 aa9.33□□□□□ -0.92
SPG11-205ENST00000558080 DIXDC1Q155Q3 683 aa9.33□□□□□ -0.92
SPG11-205ENST00000558080 CCDC102BQ68D86 513 aa9.33□□□□□ -0.92
SPG11-205ENST00000558080 APOBEC3HQ6NTF7 200 aaKnown RBP9.33□□□□□ -0.92
SPG11-205ENST00000558080 HHIPL2Q6UWX4 724 aa9.33□□□□□ -0.92
SPG11-205ENST00000558080 NEUROD6Q96NK8 337 aa9.33□□□□□ -0.92
SPG11-205ENST00000558080 MRIQ9BWK5 157 aa9.33□□□□□ -0.92
SPG11-205ENST00000558080 TMOD2Q9NZR1 351 aa9.33□□□□□ -0.92
SPG11-205ENST00000558080 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.33□□□□□ -0.92
SPG11-205ENST00000558080 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
SPG11-205ENST00000558080 A0A1B0GUL7 405 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 LDHBP07195 334 aaKnown RBP9.32□□□□□ -0.92
SPG11-205ENST00000558080 JUNDP17535 347 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 PRDX5P30044 214 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 G3BP1Q13283 466 aaKnown RBP eCLIP9.32□□□□□ -0.92
SPG11-205ENST00000558080 FTSJ3Q8IY81 847 aaKnown RBP9.32□□□□□ -0.92
SPG11-205ENST00000558080 ANKRD13AQ8IZ07 590 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 XAGE2Q96GT9 111 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 R3HDMLQ9H3Y0 253 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 C1orf115Q9H7X2 142 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 ELP3Q9H9T3 547 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 DENND2AQ9ULE3 1009 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 AKAP2Q9Y2D5 859 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 DAGLAQ9Y4D2 1042 aa9.32□□□□□ -0.92
SPG11-205ENST00000558080 ATAD5Q96QE3 1844 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 MANSC4A6NHS7 340 aaPredicted RBP9.31□□□□□ -0.92
SPG11-205ENST00000558080 ZBTB48P10074 688 aaPredicted RBP9.31□□□□□ -0.92
SPG11-205ENST00000558080 RLBP1P12271 317 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 GJA5P36382 358 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 RASGRF1Q13972 1273 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 GORABQ5T7V8 394 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 CDC42EP5Q6NZY7 148 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.31□□□□□ -0.92
SPG11-205ENST00000558080 ITPRIPQ8IWB1 547 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 ZNF296Q8WUU4 475 aaPredicted RBP9.31□□□□□ -0.92
SPG11-205ENST00000558080 KIFC2Q96AC6 838 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 GPCPD1Q9NPB8 672 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 STK17AQ9UEE5 414 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 ABCF2Q9UG63 623 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 PTPRFP10586 1907 aa9.31□□□□□ -0.92
SPG11-205ENST00000558080 UNCXA6NJT0 531 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 GPR25O00155 361 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
SPG11-205ENST00000558080 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
SPG11-205ENST00000558080 TERTO14746 1132 aaKnown RBP9.3□□□□□ -0.92
SPG11-205ENST00000558080 CLCN1P35523 988 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 INHBEP58166 350 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 ATP8B2P98198 1209 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 GUCA2AQ02747 115 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 TCP10Q12799 353 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms