RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 GPATCH3Q96I76 525 aa20.19■□□□□ 0.82
NEDD4-212ENST00000557845 ARMT1Q9H993 441 aa20.19■□□□□ 0.82
NEDD4-212ENST00000557845 CHGBP05060 677 aa20.18■□□□□ 0.82
NEDD4-212ENST00000557845 BACE1P56817 501 aa20.18■□□□□ 0.82
NEDD4-212ENST00000557845 ZSCAN25Q6NSZ9 544 aa20.18■□□□□ 0.82
NEDD4-212ENST00000557845 DCP1AQ9NPI6 582 aaPredicted RBP20.18■□□□□ 0.82
NEDD4-212ENST00000557845 MCM9Q9NXL9 1143 aa20.18■□□□□ 0.82
NEDD4-212ENST00000557845 ZBTB21Q9ULJ3 1066 aa20.18■□□□□ 0.82
NEDD4-212ENST00000557845 PTCH2Q9Y6C5 1203 aa20.18■□□□□ 0.82
NEDD4-212ENST00000557845 LOC285556D6RIA3 1793 aa20.17■□□□□ 0.82
NEDD4-212ENST00000557845 C19orf81C9J6K1 198 aa20.17■□□□□ 0.82
NEDD4-212ENST00000557845 PNMA3Q9UL41 463 aa20.17■□□□□ 0.82
NEDD4-212ENST00000557845 NAV1Q8NEY1 1877 aa20.17■□□□□ 0.82
NEDD4-212ENST00000557845 DDX60LQ5H9U9 1706 aaKnown RBP20.16■□□□□ 0.82
NEDD4-212ENST00000557845 USP17L10C9JJH3 530 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 MBD4O95243 580 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 FMNL1O95466 1100 aaPredicted RBP20.16■□□□□ 0.82
NEDD4-212ENST00000557845 GH2P01242 217 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 PRMT2P55345 433 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 PABPC4Q13310 644 aaKnown RBP eCLIP20.16■□□□□ 0.82
NEDD4-212ENST00000557845 MTMR2Q13614 643 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 CERKLQ49MI3 558 aaPredicted RBP20.16■□□□□ 0.82
NEDD4-212ENST00000557845 TSHZ3Q63HK5 1081 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 SMCR8Q8TEV9 937 aaPredicted RBP20.16■□□□□ 0.82
NEDD4-212ENST00000557845 ARMC5Q96C12 935 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 TRIM47Q96LD4 638 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 ATP8A2Q9NTI2 1148 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 MGAMO43451 1857 aa20.16■□□□□ 0.82
NEDD4-212ENST00000557845 PRKAB2O43741 272 aa20.15■□□□□ 0.82
NEDD4-212ENST00000557845 OSBPP22059 807 aa20.15■□□□□ 0.82
NEDD4-212ENST00000557845 HOXD10P28358 340 aa20.15■□□□□ 0.82
NEDD4-212ENST00000557845 SHMT1P34896 483 aa20.15■□□□□ 0.82
NEDD4-212ENST00000557845 GABPAQ06546 454 aa20.15■□□□□ 0.82
NEDD4-212ENST00000557845 NBPF11Q86T75 865 aa20.15■□□□□ 0.82
NEDD4-212ENST00000557845 TMOD4Q9NZQ9 345 aa20.15■□□□□ 0.82
NEDD4-212ENST00000557845 TTC41PQ6P2S7 1318 aa20.14■□□□□ 0.81
NEDD4-212ENST00000557845 EVX2Q03828 476 aa20.14■□□□□ 0.81
NEDD4-212ENST00000557845 ABCB5Q2M3G0 1257 aa20.14■□□□□ 0.81
NEDD4-212ENST00000557845 SLC9C1Q4G0N8 1177 aa20.14■□□□□ 0.81
NEDD4-212ENST00000557845 ANKRD13CQ8N6S4 541 aa20.14■□□□□ 0.81
NEDD4-212ENST00000557845 KBTBD3Q8NAB2 608 aa20.14■□□□□ 0.81
NEDD4-212ENST00000557845 PUS7LQ9H0K6 701 aaKnown RBP20.14■□□□□ 0.81
NEDD4-212ENST00000557845 SRRDQ9UH36 339 aa20.14■□□□□ 0.81
NEDD4-212ENST00000557845 HTTP42858 3142 aa20.13■□□□□ 0.81
NEDD4-212ENST00000557845 FCGRTP55899 365 aa20.13■□□□□ 0.81
NEDD4-212ENST00000557845 ASCC2Q9H1I8 757 aaPredicted RBP20.13■□□□□ 0.81
NEDD4-212ENST00000557845 CABP5Q9NP86 173 aa20.13■□□□□ 0.81
NEDD4-212ENST00000557845 BAZ2AQ9UIF9 1905 aaKnown RBP20.13■□□□□ 0.81
NEDD4-212ENST00000557845 CYP2D6P10635 497 aa20.12■□□□□ 0.81
NEDD4-212ENST00000557845 HOXA7P31268 230 aaPredicted RBP20.12■□□□□ 0.81
NEDD4-212ENST00000557845 GCLCP48506 637 aaPredicted RBP20.12■□□□□ 0.81
NEDD4-212ENST00000557845 HDAC1Q13547 482 aaPredicted RBP20.12■□□□□ 0.81
NEDD4-212ENST00000557845 AAMPQ13685 434 aa20.12■□□□□ 0.81
NEDD4-212ENST00000557845 RAB3GAP1Q15042 981 aa20.12■□□□□ 0.81
NEDD4-212ENST00000557845 ANKRD45Q5TZF3 282 aa20.12■□□□□ 0.81
NEDD4-212ENST00000557845 GCC1Q96CN9 775 aa20.12■□□□□ 0.81
NEDD4-212ENST00000557845 ZNF333Q96JL9 665 aa20.12■□□□□ 0.81
NEDD4-212ENST00000557845 EMILIN3Q9NT22 766 aa20.12■□□□□ 0.81
NEDD4-212ENST00000557845 SLC4A4Q9Y6R1 1079 aa20.12■□□□□ 0.81
NEDD4-212ENST00000557845 ERC2O15083 957 aa20.11■□□□□ 0.81
NEDD4-212ENST00000557845 USP17L2Q6R6M4 530 aa20.11■□□□□ 0.81
NEDD4-212ENST00000557845 PI4K2BQ8TCG2 481 aa20.11■□□□□ 0.81
NEDD4-212ENST00000557845 OTUD7AQ8TE49 926 aaPredicted RBP20.11■□□□□ 0.81
NEDD4-212ENST00000557845 MYPNQ86TC9 1320 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 POTEFA5A3E0 1075 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 USP17L12C9JPN9 530 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 USP17L21D6R901 530 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 RNF113AO15541 343 aaKnown RBP20.1■□□□□ 0.81
NEDD4-212ENST00000557845 ZFYP08048 801 aaPredicted RBP20.1■□□□□ 0.81
NEDD4-212ENST00000557845 GUCY1A2P33402 732 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 FAM110CQ1W6H9 321 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 C12orf60Q5U649 245 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 RAET1EQ8TD07 263 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 SH3TC2Q8TF17 1288 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 DYNLL2Q96FJ2 89 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 DDRGK1Q96HY6 314 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 STRBPQ96SI9 672 aaKnown RBP20.1■□□□□ 0.81
NEDD4-212ENST00000557845 ZBTB47Q9UFB7 747 aaPredicted RBP20.1■□□□□ 0.81
NEDD4-212ENST00000557845 SWAP70Q9UH65 585 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 TAOK2Q9UL54 1235 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 CENPFP49454 3210 aa20.1■□□□□ 0.81
NEDD4-212ENST00000557845 GLRX3O76003 335 aaKnown RBP20.09■□□□□ 0.81
NEDD4-212ENST00000557845 MX1P20591 662 aa20.09■□□□□ 0.81
NEDD4-212ENST00000557845 IRX3P78415 501 aaPredicted RBP20.09■□□□□ 0.81
NEDD4-212ENST00000557845 APPBP2Q92624 585 aa20.09■□□□□ 0.81
NEDD4-212ENST00000557845 OSBP2Q969R2 916 aa20.09■□□□□ 0.81
NEDD4-212ENST00000557845 P2RX7Q99572 595 aaKnown RBP20.09■□□□□ 0.81
NEDD4-212ENST00000557845 GABRQQ9UN88 632 aa20.09■□□□□ 0.81
NEDD4-212ENST00000557845 MYH8P13535 1937 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 CYP2D7A0A087X1C5 515 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 PRKCZQ05513 592 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 SEPT2Q15019 361 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 ZYXQ15942 572 aaKnown RBP20.08■□□□□ 0.81
NEDD4-212ENST00000557845 CTR9Q6PD62 1173 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 AMOTL1Q8IY63 956 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 SLC44A5Q8NCS7 719 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 ACER1Q8TDN7 264 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 C12orf42Q96LP6 360 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 FEZ1Q99689 392 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 TMEM106CQ9BVX2 250 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms