RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 GCKRQ14397 625 aa16.74■□□□□ 0.27
TMEM260-215ENST00000557626 LDHAL6AQ6ZMR3 332 aa16.74■□□□□ 0.27
TMEM260-215ENST00000557626 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
TMEM260-215ENST00000557626 PORCNQ9H237 461 aa16.74■□□□□ 0.27
TMEM260-215ENST00000557626 PQBP1O60828 265 aaKnown RBP16.73■□□□□ 0.27
TMEM260-215ENST00000557626 ATP2B2Q01814 1243 aa16.73■□□□□ 0.27
TMEM260-215ENST00000557626 TAF7LQ5H9L4 462 aa16.73■□□□□ 0.27
TMEM260-215ENST00000557626 RASIP1Q5U651 963 aa16.73■□□□□ 0.27
TMEM260-215ENST00000557626 ANO1Q5XXA6 986 aa16.73■□□□□ 0.27
TMEM260-215ENST00000557626 ZNF280CQ8ND82 737 aa16.73■□□□□ 0.27
TMEM260-215ENST00000557626 GTPBP6O43824 516 aaPredicted RBP16.72■□□□□ 0.27
TMEM260-215ENST00000557626 ALADP13716 330 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 CYP2C19P33261 490 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 CASP7P55210 303 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 HERVK_113P62684 666 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 ERVK-9P63128 1117 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 ERVK-24P63145 666 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 TMEM240Q5SV17 173 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
TMEM260-215ENST00000557626 ZSCAN29Q8IWY8 852 aaPredicted RBP16.72■□□□□ 0.27
TMEM260-215ENST00000557626 TRPV1Q8NER1 839 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 HLA-CQ95604 372 aa16.72■□□□□ 0.27
TMEM260-215ENST00000557626 A0A0G2JMZ2 1700 aa16.71■□□□□ 0.27
TMEM260-215ENST00000557626 ZFHX2Q9C0A1 2572 aaPredicted RBP16.71■□□□□ 0.27
TMEM260-215ENST00000557626 CYBAP13498 195 aa16.71■□□□□ 0.27
TMEM260-215ENST00000557626 PPIGQ13427 754 aaKnown RBP eCLIP16.71■□□□□ 0.27
TMEM260-215ENST00000557626 FBXO33Q7Z6M2 555 aa16.71■□□□□ 0.27
TMEM260-215ENST00000557626 SLC44A5Q8NCS7 719 aa16.71■□□□□ 0.27
TMEM260-215ENST00000557626 ZNF594Q96JF6 807 aaPredicted RBP16.71■□□□□ 0.27
TMEM260-215ENST00000557626 USP40Q9NVE5 1235 aa16.71■□□□□ 0.27
TMEM260-215ENST00000557626 YBX2Q9Y2T7 364 aaKnown RBP16.71■□□□□ 0.27
TMEM260-215ENST00000557626 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
TMEM260-215ENST00000557626 BRWD1Q9NSI6 2320 aa16.7■□□□□ 0.26
TMEM260-215ENST00000557626 TRIOO75962 3097 aa16.7■□□□□ 0.26
TMEM260-215ENST00000557626 SLURP2P0DP57 97 aa16.7■□□□□ 0.26
TMEM260-215ENST00000557626 MAP3K10Q02779 954 aa16.7■□□□□ 0.26
TMEM260-215ENST00000557626 LRRC41Q15345 812 aa16.7■□□□□ 0.26
TMEM260-215ENST00000557626 Q3C1V9 767 aa16.7■□□□□ 0.26
TMEM260-215ENST00000557626 PPP2R2DQ66LE6 453 aa16.7■□□□□ 0.26
TMEM260-215ENST00000557626 PAGR1Q9BTK6 254 aa16.7■□□□□ 0.26
TMEM260-215ENST00000557626 ELL2O00472 640 aaPredicted RBP16.69■□□□□ 0.26
TMEM260-215ENST00000557626 GLRX3O76003 335 aaKnown RBP16.69■□□□□ 0.26
TMEM260-215ENST00000557626 TIMP1P01033 207 aa16.69■□□□□ 0.26
TMEM260-215ENST00000557626 RGS3P49796 1198 aa16.69■□□□□ 0.26
TMEM260-215ENST00000557626 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
TMEM260-215ENST00000557626 C16orf59Q7L2K0 433 aa16.69■□□□□ 0.26
TMEM260-215ENST00000557626 TBC1D2Q9BYX2 928 aa16.69■□□□□ 0.26
TMEM260-215ENST00000557626 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
TMEM260-215ENST00000557626 RBPJLQ9UBG7 517 aa16.69■□□□□ 0.26
TMEM260-215ENST00000557626 MTCH2Q9Y6C9 303 aa16.69■□□□□ 0.26
TMEM260-215ENST00000557626 DCHS1Q96JQ0 3298 aa16.69■□□□□ 0.26
TMEM260-215ENST00000557626 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
TMEM260-215ENST00000557626 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
TMEM260-215ENST00000557626 SH3D19Q5HYK7 790 aa16.68■□□□□ 0.26
TMEM260-215ENST00000557626 MFSD5Q6N075 450 aa16.68■□□□□ 0.26
TMEM260-215ENST00000557626 PSRC1Q6PGN9 363 aaPredicted RBP16.68■□□□□ 0.26
TMEM260-215ENST00000557626 GJD3Q8N144 294 aa16.68■□□□□ 0.26
TMEM260-215ENST00000557626 MYH16Q9H6N6 1097 aa16.68■□□□□ 0.26
TMEM260-215ENST00000557626 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM260-215ENST00000557626 MBIPQ9NS73 344 aa16.68■□□□□ 0.26
TMEM260-215ENST00000557626 NDUFB9Q9Y6M9 179 aa16.68■□□□□ 0.26
TMEM260-215ENST00000557626 MYH13Q9UKX3 1938 aa16.68■□□□□ 0.26
TMEM260-215ENST00000557626 ENTPD3O75355 529 aa16.67■□□□□ 0.26
TMEM260-215ENST00000557626 HOXA7P31268 230 aaPredicted RBP16.67■□□□□ 0.26
TMEM260-215ENST00000557626 SSTR3P32745 418 aaPredicted RBP16.67■□□□□ 0.26
TMEM260-215ENST00000557626 FAAP100Q0VG06 881 aa16.67■□□□□ 0.26
TMEM260-215ENST00000557626 WDR78Q5VTH9 848 aa16.67■□□□□ 0.26
TMEM260-215ENST00000557626 SH3BP5LQ7L8J4 393 aa16.67■□□□□ 0.26
TMEM260-215ENST00000557626 PHF24Q9UPV7 400 aa16.67■□□□□ 0.26
TMEM260-215ENST00000557626 ZNF521Q96K83 1311 aa16.67■□□□□ 0.26
TMEM260-215ENST00000557626 SLC15A5A6NIM6 579 aa16.66■□□□□ 0.26
TMEM260-215ENST00000557626 DCDC2CA8MYV0 355 aa16.66■□□□□ 0.26
TMEM260-215ENST00000557626 SEPT4O43236 478 aa16.66■□□□□ 0.26
TMEM260-215ENST00000557626 POU3F3P20264 500 aaPredicted RBP16.66■□□□□ 0.26
TMEM260-215ENST00000557626 FOXO4P98177 505 aa16.66■□□□□ 0.26
TMEM260-215ENST00000557626 CCDC30Q5VVM6 783 aa16.66■□□□□ 0.26
TMEM260-215ENST00000557626 ZNF365Q70YC5 407 aa16.66■□□□□ 0.26
TMEM260-215ENST00000557626 GTF3C2Q8WUA4 911 aaPredicted RBP16.66■□□□□ 0.26
TMEM260-215ENST00000557626 MTIF3Q9H2K0 278 aaKnown RBP16.66■□□□□ 0.26
TMEM260-215ENST00000557626 TMOD4Q9NZQ9 345 aa16.66■□□□□ 0.26
TMEM260-215ENST00000557626 PTPRZ1P23471 2315 aaPredicted RBP16.65■□□□□ 0.26
TMEM260-215ENST00000557626 DDTLA6NHG4 134 aaPredicted RBP16.65■□□□□ 0.26
TMEM260-215ENST00000557626 APBB1O00213 710 aa16.65■□□□□ 0.26
TMEM260-215ENST00000557626 GFRA3O60609 400 aa16.65■□□□□ 0.26
TMEM260-215ENST00000557626 HOXC6P09630 235 aa16.65■□□□□ 0.26
TMEM260-215ENST00000557626 ACRP10323 421 aa16.65■□□□□ 0.26
TMEM260-215ENST00000557626 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
TMEM260-215ENST00000557626 ERMP1Q7Z2K6 904 aa16.65■□□□□ 0.26
TMEM260-215ENST00000557626 NPLOC4Q8TAT6 608 aa16.65■□□□□ 0.26
TMEM260-215ENST00000557626 TOX2Q96NM4 488 aa16.65■□□□□ 0.26
TMEM260-215ENST00000557626 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
TMEM260-215ENST00000557626 IVNS1ABPQ9Y6Y0 642 aa16.65■□□□□ 0.26
TMEM260-215ENST00000557626 EPG5Q9HCE0 2579 aa16.65■□□□□ 0.26
TMEM260-215ENST00000557626 USP17L5A8MUK1 530 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 SLC5A1P13866 664 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 CSF2RAP15509 400 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 CCNA1P78396 465 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 MTMR2Q13614 643 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 FAM47AQ5JRC9 791 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms