RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
APEX1-220ENST00000557592 CCDC102AQ96A19 550 aa13.49□□□□□ -0.25
APEX1-220ENST00000557592 OPTNQ96CV9 577 aa13.49□□□□□ -0.25
APEX1-220ENST00000557592 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
APEX1-220ENST00000557592 CAPNS2Q96L46 248 aa13.49□□□□□ -0.25
APEX1-220ENST00000557592 MKNK2Q9HBH9 465 aa13.49□□□□□ -0.25
APEX1-220ENST00000557592 ZNF287Q9HBT7 754 aa13.49□□□□□ -0.25
APEX1-220ENST00000557592 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
APEX1-220ENST00000557592 GH2P01242 217 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 PTPRAP18433 802 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 ECE1P42892 770 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 VEGFBP49765 207 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 JAG1P78504 1218 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 PDE4BQ07343 736 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
APEX1-220ENST00000557592 ABCB5Q2M3G0 1257 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 ERO1BQ86YB8 467 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 MAP4K1Q92918 833 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.48□□□□□ -0.25
APEX1-220ENST00000557592 ZBTB21Q9ULJ3 1066 aa13.48□□□□□ -0.25
APEX1-220ENST00000557592 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
APEX1-220ENST00000557592 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
APEX1-220ENST00000557592 SPDYE5A6NIY4 337 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 REC8O95072 547 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 ASNSP08243 561 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 AKR1B1P15121 316 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 RASA1P20936 1047 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 SPRYD7Q5W111 196 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
APEX1-220ENST00000557592 TBC1D10CQ8IV04 446 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 CABP5Q9NP86 173 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 INCENPQ9NQS7 918 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
APEX1-220ENST00000557592 FAM155AB1AL88 458 aaPredicted RBP13.46□□□□□ -0.25
APEX1-220ENST00000557592 ZBTB48P10074 688 aaPredicted RBP13.46□□□□□ -0.25
APEX1-220ENST00000557592 GJA5P36382 358 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 PPATQ06203 517 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 RAB3GAP1Q15042 981 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 RRP12Q5JTH9 1297 aaKnown RBP13.46□□□□□ -0.25
APEX1-220ENST00000557592 AKNAD1Q5T1N1 836 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 MFSD6Q6ZSS7 791 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 ZNF444Q8N0Y2 327 aaPredicted RBP13.46□□□□□ -0.25
APEX1-220ENST00000557592 STAG1Q8WVM7 1258 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 GINM1Q9NU53 330 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
APEX1-220ENST00000557592 TACC3Q9Y6A5 838 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 ZHX2Q9Y6X8 837 aa13.46□□□□□ -0.25
APEX1-220ENST00000557592 PHIPQ8WWQ0 1821 aa13.46□□□□□ -0.26
APEX1-220ENST00000557592 USP17L5A8MUK1 530 aa13.45□□□□□ -0.26
APEX1-220ENST00000557592 AOC2O75106 756 aa13.45□□□□□ -0.26
APEX1-220ENST00000557592 CYP21A2P08686 494 aa13.45□□□□□ -0.26
APEX1-220ENST00000557592 NOGQ13253 232 aa13.45□□□□□ -0.26
APEX1-220ENST00000557592 PPIL2Q13356 520 aa13.45□□□□□ -0.26
APEX1-220ENST00000557592 SEPT2Q15019 361 aa13.45□□□□□ -0.26
APEX1-220ENST00000557592 TMEM179Q6ZVK1 233 aa13.45□□□□□ -0.26
APEX1-220ENST00000557592 RNF41Q9H4P4 317 aaPredicted RBP13.45□□□□□ -0.26
APEX1-220ENST00000557592 NEDD4P46934 1319 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 TSPY2A6NKD2 308 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 IRF6O14896 467 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 ORC4O43929 436 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 RANBP6O60518 1105 aaKnown RBP13.44□□□□□ -0.26
APEX1-220ENST00000557592 TSPY3P0CV98 308 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 TSPY8P0CW00 308 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 PCP11498 1178 aaKnown RBP13.44□□□□□ -0.26
APEX1-220ENST00000557592 TFAP4Q01664 338 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 FAM47AQ5JRC9 791 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 AS3MTQ9HBK9 375 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 AFG3L2Q9Y4W6 797 aa13.44□□□□□ -0.26
APEX1-220ENST00000557592 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
APEX1-220ENST00000557592 SLC27A2O14975 620 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 FGRP09769 529 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 GUCY1A2P33402 732 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 KIF23Q02241 960 aaPredicted RBP13.43□□□□□ -0.26
APEX1-220ENST00000557592 SPP2Q13103 211 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 SNAPC2Q13487 334 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 CREB3L3Q68CJ9 461 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 CLEC10AQ8IUN9 316 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 DNAJC5GQ8N7S2 189 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 ZNF280CQ8ND82 737 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 CNNM2Q9H8M5 875 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 TAF6LQ9Y6J9 622 aa13.43□□□□□ -0.26
APEX1-220ENST00000557592 MAP2K2P36507 400 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 GTF2A2P52657 109 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 ATP2B2Q01814 1243 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 ICA1Q05084 483 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 TRDNQ13061 729 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 NECTIN1Q15223 517 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 RNF20Q5VTR2 975 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 NEDD1Q8NHV4 660 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 ESR2Q92731 530 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 FEZ1Q99689 392 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 WDR18Q9BV38 432 aa13.42□□□□□ -0.26
APEX1-220ENST00000557592 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.42□□□□□ -0.26
APEX1-220ENST00000557592 KRT23Q9C075 422 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms