RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 POTEEQ6S8J3 1075 aa15.06■□□□□ 0
RTN1-208ENST00000557422 PI16Q6UXB8 463 aa15.06■□□□□ 0
RTN1-208ENST00000557422 GPR142Q7Z601 462 aa15.06■□□□□ 0
RTN1-208ENST00000557422 TEX11Q8IYF3 940 aa15.06■□□□□ 0
RTN1-208ENST00000557422 LBHD1Q9BQE6 289 aaPredicted RBP15.06■□□□□ 0
RTN1-208ENST00000557422 AKAP2Q9Y2D5 859 aa15.06■□□□□ 0
RTN1-208ENST00000557422 LAMA2P24043 3122 aaKnown RBP15.05■□□□□ -0
RTN1-208ENST00000557422 PLEKHH3Q7Z736 793 aa15.05■□□□□ -0
RTN1-208ENST00000557422 CCAR1Q8IX12 1150 aaKnown RBP15.05■□□□□ -0
RTN1-208ENST00000557422 SPATA5Q8NB90 893 aa15.05■□□□□ -0
RTN1-208ENST00000557422 SH3RF3Q8TEJ3 882 aaPredicted RBP15.05■□□□□ -0
RTN1-208ENST00000557422 SENP6Q9GZR1 1112 aaPredicted RBP15.05■□□□□ -0
RTN1-208ENST00000557422 RAI14Q9P0K7 980 aa15.05■□□□□ -0
RTN1-208ENST00000557422 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.05■□□□□ -0
RTN1-208ENST00000557422 USP17L10C9JJH3 530 aa15.04■□□□□ -0
RTN1-208ENST00000557422 SHROOM1Q2M3G4 852 aaPredicted RBP15.04■□□□□ -0
RTN1-208ENST00000557422 ALDH1L2Q3SY69 923 aa15.04■□□□□ -0
RTN1-208ENST00000557422 METTL16Q86W50 562 aaKnown RBP15.04■□□□□ -0
RTN1-208ENST00000557422 NEUROD6Q96NK8 337 aa15.04■□□□□ -0
RTN1-208ENST00000557422 APBA2Q99767 749 aa15.04■□□□□ -0
RTN1-208ENST00000557422 PAGR1Q9BTK6 254 aa15.04■□□□□ -0
RTN1-208ENST00000557422 DHX36Q9H2U1 1008 aaKnown RBP15.04■□□□□ -0
RTN1-208ENST00000557422 HDAC5Q9UQL6 1122 aa15.04■□□□□ -0
RTN1-208ENST00000557422 DNAH12Q6ZR08 3092 aa15.03■□□□□ -0
RTN1-208ENST00000557422 SIPA1L1O43166 1804 aa15.03■□□□□ -0
RTN1-208ENST00000557422 E9PSI1 815 aa15.03■□□□□ -0
RTN1-208ENST00000557422 ANP32CO43423 234 aa15.03■□□□□ -0
RTN1-208ENST00000557422 MAP2K5Q13163 448 aa15.03■□□□□ -0
RTN1-208ENST00000557422 GTF3C2Q8WUA4 911 aaPredicted RBP15.03■□□□□ -0
RTN1-208ENST00000557422 EDC3Q96F86 508 aaKnown RBP15.03■□□□□ -0
RTN1-208ENST00000557422 DNAJC18Q9H819 358 aa15.03■□□□□ -0
RTN1-208ENST00000557422 EMILIN3Q9NT22 766 aa15.03■□□□□ -0
RTN1-208ENST00000557422 SMC4Q9NTJ3 1288 aa15.03■□□□□ -0
RTN1-208ENST00000557422 ATN1P54259 1190 aaPredicted RBP15.02■□□□□ -0
RTN1-208ENST00000557422 GORABQ5T7V8 394 aa15.02■□□□□ -0
RTN1-208ENST00000557422 ZNF697Q5TEC3 545 aa15.02■□□□□ -0
RTN1-208ENST00000557422 MFSD14CQ5VZR4 134 aa15.02■□□□□ -0
RTN1-208ENST00000557422 FOXP4Q8IVH2 680 aaPredicted RBP15.02■□□□□ -0
RTN1-208ENST00000557422 CDX2Q99626 313 aaPredicted RBP15.02■□□□□ -0
RTN1-208ENST00000557422 MEIS3Q99687 375 aa15.02■□□□□ -0
RTN1-208ENST00000557422 GINM1Q9NU53 330 aa15.02■□□□□ -0
RTN1-208ENST00000557422 FLRT1Q9NZU1 646 aa15.02■□□□□ -0
RTN1-208ENST00000557422 FRMPD3Q5JV73 1810 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 VCANP13611 3396 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 MAST2Q6P0Q8 1798 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 GDF11O95390 407 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 ARID4AP29374 1257 aaPredicted RBP15.01□□□□□ -0.01
RTN1-208ENST00000557422 TGFBRAP1Q8WUH2 860 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 NOL10Q9BSC4 688 aaKnown RBP15.01□□□□□ -0.01
RTN1-208ENST00000557422 SEMA6BQ9H3T3 888 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 CWC22Q9HCG8 908 aaKnown RBP15.01□□□□□ -0.01
RTN1-208ENST00000557422 LRP2BPQ9P2M1 347 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 DDX20Q9UHI6 824 aaKnown RBP15.01□□□□□ -0.01
RTN1-208ENST00000557422 ZBTB21Q9ULJ3 1066 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 RABGAP1Q9Y3P9 1069 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 NDUFB9Q9Y6M9 179 aa15.01□□□□□ -0.01
RTN1-208ENST00000557422 TTC28Q96AY4 2481 aa15□□□□□ -0.01
RTN1-208ENST00000557422 SRGAP3O43295 1099 aa15□□□□□ -0.01
RTN1-208ENST00000557422 CNMDO75829 334 aa15□□□□□ -0.01
RTN1-208ENST00000557422 MCAMP43121 646 aa15□□□□□ -0.01
RTN1-208ENST00000557422 RTP1P59025 263 aa15□□□□□ -0.01
RTN1-208ENST00000557422 PPP4CP60510 307 aa15□□□□□ -0.01
RTN1-208ENST00000557422 SLFN5Q08AF3 891 aa15□□□□□ -0.01
RTN1-208ENST00000557422 USP17L2Q6R6M4 530 aa15□□□□□ -0.01
RTN1-208ENST00000557422 MAPKAPK5Q8IW41 473 aa15□□□□□ -0.01
RTN1-208ENST00000557422 CRACR2BQ8N4Y2 399 aaPredicted RBP15□□□□□ -0.01
RTN1-208ENST00000557422 MAFAQ8NHW3 353 aaPredicted RBP15□□□□□ -0.01
RTN1-208ENST00000557422 LPAR1Q92633 364 aa15□□□□□ -0.01
RTN1-208ENST00000557422 AATFQ9NY61 560 aaKnown RBP eCLIP15□□□□□ -0.01
RTN1-208ENST00000557422 PRKAG2Q9UGJ0 569 aa15□□□□□ -0.01
RTN1-208ENST00000557422 PALD1Q9ULE6 856 aa15□□□□□ -0.01
RTN1-208ENST00000557422 NOB1Q9ULX3 412 aaKnown RBP15□□□□□ -0.01
RTN1-208ENST00000557422 FLT1P17948 1338 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 SLC15A5A6NIM6 579 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 DNM1LO00429 736 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 GLRX3O76003 335 aaKnown RBP14.99□□□□□ -0.01
RTN1-208ENST00000557422 BAG3O95817 575 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 PLCG2P16885 1265 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 PTPREP23469 700 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 CNGA1P29973 690 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 SHHQ15465 462 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 TRIM34Q9BYJ4 488 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 PRDM6Q9NQX0 595 aa14.99□□□□□ -0.01
RTN1-208ENST00000557422 USP17L15C9J2P7 530 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 USP17L13C9JLJ4 530 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 USP17L11C9JVI0 530 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 USP17L18D6R9N7 530 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 USP17L22D6RA61 530 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 USP17L17D6RBQ6 530 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 USP17L19D6RCP7 530 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 USP17L20D6RJB6 530 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 MSCO60682 206 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 HOXC6P09630 235 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 UQCRFS1P1P0C7P4 283 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 CCNA1P78396 465 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 ATP2B2Q01814 1243 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 USP17L24Q0WX57 530 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 MTX1Q13505 466 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 C9orf50Q5SZB4 431 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 NAA16Q6N069 864 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms