RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CYP26A1O43174 497 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 LRIG2O94898 1065 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 TGFB1P01137 390 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 F13BP05160 661 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 HCLS1P14317 486 aaPredicted RBP6.28□□□□□ -1.4
CHD8-212ENST00000557329 SPINK2P20155 84 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 GBP2P32456 591 aaPredicted RBP6.28□□□□□ -1.4
CHD8-212ENST00000557329 MLECQ14165 292 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 HID1Q8IV36 788 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 PHC3Q8NDX5 983 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 GAL3ST3Q96A11 431 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 ISL2Q96A47 359 aa6.28□□□□□ -1.4
CHD8-212ENST00000557329 CUX1P39880 1505 aa6.27□□□□□ -1.41
CHD8-212ENST00000557329 DCDC2CA8MYV0 355 aa6.27□□□□□ -1.41
CHD8-212ENST00000557329 ETF1P62495 437 aaKnown RBP6.27□□□□□ -1.41
CHD8-212ENST00000557329 CAMK2GQ13555 558 aaPredicted RBP6.27□□□□□ -1.41
CHD8-212ENST00000557329 WIPI1Q5MNZ9 446 aaPredicted RBP6.27□□□□□ -1.41
CHD8-212ENST00000557329 C12orf40Q86WS4 652 aa6.27□□□□□ -1.41
CHD8-212ENST00000557329 STK11IPQ8N1F8 1099 aa6.27□□□□□ -1.41
CHD8-212ENST00000557329 TMEM87AQ8NBN3 555 aa6.27□□□□□ -1.41
CHD8-212ENST00000557329 GATAD2BQ8WXI9 593 aa6.27□□□□□ -1.41
CHD8-212ENST00000557329 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
CHD8-212ENST00000557329 RNF19AQ9NV58 838 aa6.27□□□□□ -1.41
CHD8-212ENST00000557329 ARID4BQ4LE39 1312 aaPredicted RBP6.26□□□□□ -1.41
CHD8-212ENST00000557329 IGF2BP3O00425 579 aaKnown RBP eCLIP6.26□□□□□ -1.41
CHD8-212ENST00000557329 TFE3P19532 575 aaPredicted RBP6.26□□□□□ -1.41
CHD8-212ENST00000557329 TAGLNQ01995 201 aaKnown RBP6.26□□□□□ -1.41
CHD8-212ENST00000557329 FZD5Q13467 585 aa6.26□□□□□ -1.41
CHD8-212ENST00000557329 MPP2Q14168 576 aa6.26□□□□□ -1.41
CHD8-212ENST00000557329 MAP3K11Q16584 847 aa6.26□□□□□ -1.41
CHD8-212ENST00000557329 PPM1JQ5JR12 505 aa6.26□□□□□ -1.41
CHD8-212ENST00000557329 SLC6A19Q695T7 634 aa6.26□□□□□ -1.41
CHD8-212ENST00000557329 ARHGAP27Q6ZUM4 889 aa6.26□□□□□ -1.41
CHD8-212ENST00000557329 ERMP1Q7Z2K6 904 aa6.26□□□□□ -1.41
CHD8-212ENST00000557329 GATA6Q92908 595 aa6.26□□□□□ -1.41
CHD8-212ENST00000557329 PLPPR2Q96GM1 343 aa6.26□□□□□ -1.41
CHD8-212ENST00000557329 BSDC1Q9NW68 430 aaPredicted RBP6.26□□□□□ -1.41
CHD8-212ENST00000557329 SUPT16HQ9Y5B9 1047 aaKnown RBP6.26□□□□□ -1.41
CHD8-212ENST00000557329 PRAMEF27A3QJZ7 478 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 GFRA2O00451 464 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 NEFMP07197 916 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 CYP7A1P22680 504 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 SNAP47Q5SQN1 464 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 LRFN4Q6PJG9 635 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 DTX1Q86Y01 620 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 RHOVQ96L33 236 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 FOXQ1Q9C009 403 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 KCNQ5Q9NR82 932 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 GGT7Q9UJ14 662 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 MAPKBP1O60336 1514 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 FHAD1B1AJZ9 1412 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 NUP160Q12769 1436 aa6.25□□□□□ -1.41
CHD8-212ENST00000557329 ARID1BQ8NFD5 2236 aaPredicted RBP6.24□□□□□ -1.41
CHD8-212ENST00000557329 SCAMP3O14828 347 aaKnown RBP6.24□□□□□ -1.41
CHD8-212ENST00000557329 ADAMTS4O75173 837 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 CILPO75339 1184 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 WNT11O96014 354 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 PRNPP04156 253 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 FAM87AP0C7U9 286 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 ADMP35318 185 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 ZNF76P36508 570 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 HSPA2P54652 639 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 INPP5AQ14642 412 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 CWF19L2Q2TBE0 894 aaKnown RBP6.24□□□□□ -1.41
CHD8-212ENST00000557329 RASIP1Q5U651 963 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 MRPL41Q8IXM3 137 aaKnown RBP6.24□□□□□ -1.41
CHD8-212ENST00000557329 FBXL18Q96ME1 805 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 DUSP23Q9BVJ7 150 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 PRDM10Q9NQV6 1147 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 ANGEL1Q9UNK9 670 aaKnown RBP6.24□□□□□ -1.41
CHD8-212ENST00000557329 MAPK8IP1Q9UQF2 711 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 PCDHB5Q9Y5E4 795 aa6.24□□□□□ -1.41
CHD8-212ENST00000557329 PF4P02776 101 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 EIF4A3P38919 411 aaKnown RBP6.23□□□□□ -1.41
CHD8-212ENST00000557329 YARSP54577 528 aaKnown RBP6.23□□□□□ -1.41
CHD8-212ENST00000557329 SEPT6Q14141 434 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 MPRIPQ6WCQ1 1025 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 FAM196AQ6ZSG2 479 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 ZNF765Q7L2R6 523 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 VSIG10LQ86VR7 867 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 JARID2Q92833 1246 aaPredicted RBP6.23□□□□□ -1.41
CHD8-212ENST00000557329 RNF34Q969K3 372 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 SPATA32Q96LK8 384 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 LRRC3Q9BY71 257 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 SNX11Q9Y5W9 270 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 CSADQ9Y600 493 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 ADCY10Q96PN6 1610 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 PRR36Q9H6K5 1346 aa6.23□□□□□ -1.41
CHD8-212ENST00000557329 FAM221AA4D161 298 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 FAM170BA6NMN3 283 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 CST3P01034 146 aaPredicted RBP6.22□□□□□ -1.41
CHD8-212ENST00000557329 PGRP06401 933 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 GRK4P32298 578 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 NTF4P34130 210 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 PTPN11Q06124 597 aaPredicted RBP6.22□□□□□ -1.41
CHD8-212ENST00000557329 MSMPQ1L6U9 139 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 TMEM201Q5SNT2 666 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 C22orf34Q6ZV56 151 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 ARMCX6Q7L4S7 300 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 AGBL5Q8NDL9 886 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms