RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 BAG3O95817 575 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 UQCRFS1P1P0C7P4 283 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 ZKSCAN1P17029 563 aaPredicted RBP15.13■□□□□ 0.01
SNX6-209ENST00000557265 MAPK4P31152 587 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 CACNB2Q08289 660 aaPredicted RBP15.13■□□□□ 0.01
SNX6-209ENST00000557265 PDE3AQ14432 1141 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 SHROOM1Q2M3G4 852 aaPredicted RBP15.13■□□□□ 0.01
SNX6-209ENST00000557265 Q3C1V9 767 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 NAA16Q6N069 864 aaPredicted RBP15.13■□□□□ 0.01
SNX6-209ENST00000557265 FOXP4Q8IVH2 680 aaPredicted RBP15.13■□□□□ 0.01
SNX6-209ENST00000557265 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 CCAR1Q8IX12 1150 aaKnown RBP15.13■□□□□ 0.01
SNX6-209ENST00000557265 TRMT44Q8IYL2 757 aaKnown RBP15.13■□□□□ 0.01
SNX6-209ENST00000557265 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 DNAJC18Q9H819 358 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 SNRKQ9NRH2 765 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 COL6A3P12111 3177 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 DOCK3Q8IZD9 2030 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 COL6A1P12109 1028 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 PLCG2P16885 1265 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 RARSP54136 660 aaKnown RBP15.12■□□□□ 0.01
SNX6-209ENST00000557265 G3BP1Q13283 466 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNX6-209ENST00000557265 CCL14Q16627 93 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 LHX8Q68G74 356 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
SNX6-209ENST00000557265 CRACR2BQ8N4Y2 399 aaPredicted RBP15.12■□□□□ 0.01
SNX6-209ENST00000557265 ARHGAP45Q92619 1136 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 USP6NLQ92738 828 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 PAGR1Q9BTK6 254 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 PORCNQ9H237 461 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 MTMR10Q9NXD2 777 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 PALD1Q9ULE6 856 aa15.12■□□□□ 0.01
SNX6-209ENST00000557265 PNMA6EA0A0J9YXQ4 647 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 CCND3P30281 292 aaPredicted RBP15.11■□□□□ 0.01
SNX6-209ENST00000557265 RGS2P41220 211 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 PPP4CP60510 307 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 ERVK-9P63128 1117 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 ERVK-24P63145 666 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 GPR142Q7Z601 462 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 PLEKHH3Q7Z736 793 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 ADGRA1Q86SQ6 560 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 EMILIN3Q9NT22 766 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 GINM1Q9NU53 330 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 ZBTB21Q9ULJ3 1066 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 STXBP5LQ9Y2K9 1186 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 FLT1P17948 1338 aa15.11■□□□□ 0.01
SNX6-209ENST00000557265 GNAI2P04899 355 aa15.1■□□□□ 0.01
SNX6-209ENST00000557265 LRRC26Q2I0M4 334 aa15.1■□□□□ 0.01
SNX6-209ENST00000557265 TTC39AQ5SRH9 613 aa15.1■□□□□ 0.01
SNX6-209ENST00000557265 MORN1Q5T089 497 aa15.1■□□□□ 0.01
SNX6-209ENST00000557265 POTEEQ6S8J3 1075 aa15.1■□□□□ 0.01
SNX6-209ENST00000557265 SAP30BPQ9UHR5 308 aaKnown RBP15.1■□□□□ 0.01
SNX6-209ENST00000557265 LOC285556D6RIA3 1793 aa15.1■□□□□ 0.01
SNX6-209ENST00000557265 MDM2Q00987 491 aaPredicted RBP15.09■□□□□ 0.01
SNX6-209ENST00000557265 GTF3C2Q8WUA4 911 aaPredicted RBP15.09■□□□□ 0.01
SNX6-209ENST00000557265 APBA2Q99767 749 aa15.09■□□□□ 0.01
SNX6-209ENST00000557265 CWC22Q9HCG8 908 aaKnown RBP15.09■□□□□ 0.01
SNX6-209ENST00000557265 ALPK3Q96L96 1907 aa15.09■□□□□ 0.01
SNX6-209ENST00000557265 GH2P01242 217 aa15.08■□□□□ 0
SNX6-209ENST00000557265 CYP2E1P05181 493 aaPredicted RBP15.08■□□□□ 0
SNX6-209ENST00000557265 HLA-DOAP06340 250 aa15.08■□□□□ 0
SNX6-209ENST00000557265 CCDC158Q5M9N0 1113 aa15.08■□□□□ 0
SNX6-209ENST00000557265 USP17L2Q6R6M4 530 aa15.08■□□□□ 0
SNX6-209ENST00000557265 EDC3Q96F86 508 aaKnown RBP15.08■□□□□ 0
SNX6-209ENST00000557265 DBNDD2Q9BQY9 259 aa15.08■□□□□ 0
SNX6-209ENST00000557265 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
SNX6-209ENST00000557265 IPO8O15397 1037 aaKnown RBP15.07■□□□□ 0
SNX6-209ENST00000557265 MAP2K5Q13163 448 aa15.07■□□□□ 0
SNX6-209ENST00000557265 ZYXQ15942 572 aaKnown RBP15.07■□□□□ 0
SNX6-209ENST00000557265 ATF7IPQ6VMQ6 1270 aa15.07■□□□□ 0
SNX6-209ENST00000557265 GPR108Q9NPR9 543 aa15.07■□□□□ 0
SNX6-209ENST00000557265 TNNQ9UQP3 1299 aa15.07■□□□□ 0
SNX6-209ENST00000557265 USP17L15C9J2P7 530 aa15.06■□□□□ 0
SNX6-209ENST00000557265 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
SNX6-209ENST00000557265 USP17L11C9JVI0 530 aa15.06■□□□□ 0
SNX6-209ENST00000557265 USP17L18D6R9N7 530 aa15.06■□□□□ 0
SNX6-209ENST00000557265 USP17L22D6RA61 530 aa15.06■□□□□ 0
SNX6-209ENST00000557265 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
SNX6-209ENST00000557265 USP17L19D6RCP7 530 aa15.06■□□□□ 0
SNX6-209ENST00000557265 USP17L20D6RJB6 530 aa15.06■□□□□ 0
SNX6-209ENST00000557265 CNMDO75829 334 aa15.06■□□□□ 0
SNX6-209ENST00000557265 TRIM27P14373 513 aa15.06■□□□□ 0
SNX6-209ENST00000557265 ZAP70P43403 619 aa15.06■□□□□ 0
SNX6-209ENST00000557265 DYNLL1P63167 89 aaKnown RBP15.06■□□□□ 0
SNX6-209ENST00000557265 USP17L24Q0WX57 530 aa15.06■□□□□ 0
SNX6-209ENST00000557265 TNNI3KQ59H18 835 aa15.06■□□□□ 0
SNX6-209ENST00000557265 MFSD14CQ5VZR4 134 aa15.06■□□□□ 0
SNX6-209ENST00000557265 FEZ1Q99689 392 aa15.06■□□□□ 0
SNX6-209ENST00000557265 SENP6Q9GZR1 1112 aaPredicted RBP15.06■□□□□ 0
SNX6-209ENST00000557265 PIH1D3Q9NQM4 214 aaKnown RBP15.06■□□□□ 0
SNX6-209ENST00000557265 FLRT1Q9NZU1 646 aa15.06■□□□□ 0
SNX6-209ENST00000557265 RABGAP1Q9Y3P9 1069 aa15.06■□□□□ 0
SNX6-209ENST00000557265 FPGT-TNNI3KV9GXZ4 949 aa15.06■□□□□ 0
SNX6-209ENST00000557265 DDX60LQ5H9U9 1706 aaKnown RBP15.06■□□□□ 0
SNX6-209ENST00000557265 GLRX3O76003 335 aaKnown RBP15.05■□□□□ -0
SNX6-209ENST00000557265 CYP7A1P22680 504 aa15.05■□□□□ -0
SNX6-209ENST00000557265 CCNA1P78396 465 aa15.05■□□□□ -0
SNX6-209ENST00000557265 OS9Q13438 667 aaPredicted RBP15.05■□□□□ -0
SNX6-209ENST00000557265 WDR78Q5VTH9 848 aa15.05■□□□□ -0
SNX6-209ENST00000557265 FRAT1Q92837 279 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms