RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 HOXA7P31268 230 aaPredicted RBP11.91□□□□□ -0.5
RIPK3-205ENST00000557253 RGS2P41220 211 aa11.91□□□□□ -0.5
RIPK3-205ENST00000557253 ERVK-9P63128 1117 aa11.91□□□□□ -0.5
RIPK3-205ENST00000557253 ERVK-24P63145 666 aa11.91□□□□□ -0.5
RIPK3-205ENST00000557253 MORN1Q5T089 497 aa11.91□□□□□ -0.5
RIPK3-205ENST00000557253 PLEKHH3Q7Z736 793 aa11.91□□□□□ -0.5
RIPK3-205ENST00000557253 TEX11Q8IYF3 940 aa11.91□□□□□ -0.5
RIPK3-205ENST00000557253 TRMT44Q8IYL2 757 aaKnown RBP11.91□□□□□ -0.5
RIPK3-205ENST00000557253 NSUN4Q96CB9 384 aaKnown RBP11.91□□□□□ -0.5
RIPK3-205ENST00000557253 CDX2Q99626 313 aaPredicted RBP11.91□□□□□ -0.5
RIPK3-205ENST00000557253 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
RIPK3-205ENST00000557253 RAI14Q9P0K7 980 aa11.91□□□□□ -0.5
RIPK3-205ENST00000557253 SIPA1L1O43166 1804 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 PDS5AQ29RF7 1337 aaKnown RBP11.9□□□□□ -0.5
RIPK3-205ENST00000557253 MAST2Q6P0Q8 1798 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 GDF11O95390 407 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 LDHCP07864 332 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 CNGA1P29973 690 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 TFCP2Q12800 502 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 POTEEQ6S8J3 1075 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 SH3RF3Q8TEJ3 882 aaPredicted RBP11.9□□□□□ -0.5
RIPK3-205ENST00000557253 NEUROD6Q96NK8 337 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 WDR18Q9BV38 432 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 FLRT1Q9NZU1 646 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 HMG20BQ9P0W2 317 aa11.9□□□□□ -0.5
RIPK3-205ENST00000557253 HERC5Q9UII4 1024 aaKnown RBP11.9□□□□□ -0.5
RIPK3-205ENST00000557253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.9□□□□□ -0.5
RIPK3-205ENST00000557253 USP17L10C9JJH3 530 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 ZBTB22O15209 634 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 GSTO1P78417 241 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 WDR78Q5VTH9 848 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 SPATA5Q8NB90 893 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 MAFAQ8NHW3 353 aaPredicted RBP11.89□□□□□ -0.51
RIPK3-205ENST00000557253 MYLIPQ8WY64 445 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 APBA2Q99767 749 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 DNAJC18Q9H819 358 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 COPRSQ9NQ92 184 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 PRDM6Q9NQX0 595 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 PI4KBQ9UBF8 816 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 PRKAG2Q9UGJ0 569 aa11.89□□□□□ -0.51
RIPK3-205ENST00000557253 C19orf81C9J6K1 198 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 ASNSP08243 561 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 RTP1P59025 263 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 MAP2K5Q13163 448 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 MVPQ14764 893 aaKnown RBP11.88□□□□□ -0.51
RIPK3-205ENST00000557253 SHHQ15465 462 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 ZYXQ15942 572 aaKnown RBP11.88□□□□□ -0.51
RIPK3-205ENST00000557253 C9orf50Q5SZB4 431 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 MAPKAPK5Q8IW41 473 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 CRACR2BQ8N4Y2 399 aaPredicted RBP11.88□□□□□ -0.51
RIPK3-205ENST00000557253 TGFBRAP1Q8WUH2 860 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 EDC3Q96F86 508 aaKnown RBP11.88□□□□□ -0.51
RIPK3-205ENST00000557253 PRDM5Q9NQX1 630 aaPredicted RBP11.88□□□□□ -0.51
RIPK3-205ENST00000557253 EMILIN3Q9NT22 766 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
RIPK3-205ENST00000557253 ATP11BQ9Y2G3 1177 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 LTBP2Q14767 1821 aa11.88□□□□□ -0.51
RIPK3-205ENST00000557253 CNMDO75829 334 aa11.87□□□□□ -0.51
RIPK3-205ENST00000557253 MAP4K4O95819 1239 aaPredicted RBP11.87□□□□□ -0.51
RIPK3-205ENST00000557253 GJC2Q5T442 439 aaPredicted RBP11.87□□□□□ -0.51
RIPK3-205ENST00000557253 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
RIPK3-205ENST00000557253 MFSD14CQ5VZR4 134 aa11.87□□□□□ -0.51
RIPK3-205ENST00000557253 NOL10Q9BSC4 688 aaKnown RBP11.87□□□□□ -0.51
RIPK3-205ENST00000557253 TRIM34Q9BYJ4 488 aa11.87□□□□□ -0.51
RIPK3-205ENST00000557253 LRP2BPQ9P2M1 347 aa11.87□□□□□ -0.51
RIPK3-205ENST00000557253 DDX20Q9UHI6 824 aaKnown RBP11.87□□□□□ -0.51
RIPK3-205ENST00000557253 AKAP2Q9Y2D5 859 aa11.87□□□□□ -0.51
RIPK3-205ENST00000557253 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 CYP2C19P33261 490 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 ATP2B2Q01814 1243 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 ANO1Q5XXA6 986 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 TRPV1Q8NER1 839 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 NPLOC4Q8TAT6 608 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 LPAR1Q92633 364 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 BADQ92934 168 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 YTHDC1Q96MU7 727 aaKnown RBP11.86□□□□□ -0.51
RIPK3-205ENST00000557253 MEIS3Q99687 375 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 DHX36Q9H2U1 1008 aaKnown RBP11.86□□□□□ -0.51
RIPK3-205ENST00000557253 TTYH1Q9H313 450 aaPredicted RBP11.86□□□□□ -0.51
RIPK3-205ENST00000557253 SMC4Q9NTJ3 1288 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 SAP30BPQ9UHR5 308 aaKnown RBP11.86□□□□□ -0.51
RIPK3-205ENST00000557253 PALD1Q9ULE6 856 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 ZBTB21Q9ULJ3 1066 aa11.86□□□□□ -0.51
RIPK3-205ENST00000557253 CDH23Q9H251 3354 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 PRUNE2Q8WUY3 3088 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 DNM1LO00429 736 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 SRGAP3O43295 1099 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
RIPK3-205ENST00000557253 FOSL2P15408 326 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 PTPREP23469 700 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 MCAMP43121 646 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 HNRNPUQ00839 825 aaKnown RBP eCLIP11.85□□□□□ -0.51
RIPK3-205ENST00000557253 USP17L2Q6R6M4 530 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 SNRKQ9NRH2 765 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 NOB1Q9ULX3 412 aaKnown RBP11.85□□□□□ -0.51
RIPK3-205ENST00000557253 RABGAP1Q9Y3P9 1069 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 CDK5RAP2Q96SN8 1893 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 FLT1P17948 1338 aa11.85□□□□□ -0.51
RIPK3-205ENST00000557253 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms