RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
VRTN-202ENST00000557177 TAOK2Q9UL54 1235 aa17.66■□□□□ 0.42
VRTN-202ENST00000557177 PALD1Q9ULE6 856 aa17.66■□□□□ 0.42
VRTN-202ENST00000557177 ALPK3Q96L96 1907 aa17.66■□□□□ 0.42
VRTN-202ENST00000557177 ZBTB7BO15156 539 aaPredicted RBP17.65■□□□□ 0.42
VRTN-202ENST00000557177 TFRCP02786 760 aaKnown RBP17.65■□□□□ 0.42
VRTN-202ENST00000557177 RLBP1P12271 317 aa17.65■□□□□ 0.42
VRTN-202ENST00000557177 NR2E3Q9Y5X4 410 aa17.65■□□□□ 0.42
VRTN-202ENST00000557177 MYH1P12882 1939 aa17.64■□□□□ 0.42
VRTN-202ENST00000557177 C19orf81C9J6K1 198 aa17.64■□□□□ 0.41
VRTN-202ENST00000557177 HMGCRP04035 888 aa17.64■□□□□ 0.41
VRTN-202ENST00000557177 FTSJ3Q8IY81 847 aaKnown RBP17.64■□□□□ 0.41
VRTN-202ENST00000557177 CRACR2BQ8N4Y2 399 aaPredicted RBP17.64■□□□□ 0.41
VRTN-202ENST00000557177 EAF2Q96CJ1 260 aaPredicted RBP17.64■□□□□ 0.41
VRTN-202ENST00000557177 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.64■□□□□ 0.41
VRTN-202ENST00000557177 ZBTB21Q9ULJ3 1066 aa17.64■□□□□ 0.41
VRTN-202ENST00000557177 GDF11O95390 407 aa17.63■□□□□ 0.41
VRTN-202ENST00000557177 DYNLL1P63167 89 aaKnown RBP17.63■□□□□ 0.41
VRTN-202ENST00000557177 IRX3P78415 501 aaPredicted RBP17.63■□□□□ 0.41
VRTN-202ENST00000557177 ITPRIPQ8IWB1 547 aa17.63■□□□□ 0.41
VRTN-202ENST00000557177 P2RX7Q99572 595 aaKnown RBP17.63■□□□□ 0.41
VRTN-202ENST00000557177 CCDC8Q9H0W5 538 aaPredicted RBP17.63■□□□□ 0.41
VRTN-202ENST00000557177 TXNRD2Q9NNW7 524 aa17.63■□□□□ 0.41
VRTN-202ENST00000557177 TMOD4Q9NZQ9 345 aa17.63■□□□□ 0.41
VRTN-202ENST00000557177 SAP30BPQ9UHR5 308 aaKnown RBP17.63■□□□□ 0.41
VRTN-202ENST00000557177 DDX60LQ5H9U9 1706 aaKnown RBP17.62■□□□□ 0.41
VRTN-202ENST00000557177 USP17L10C9JJH3 530 aa17.62■□□□□ 0.41
VRTN-202ENST00000557177 HLA-DOAP06340 250 aa17.62■□□□□ 0.41
VRTN-202ENST00000557177 HERVK_113P62684 666 aa17.62■□□□□ 0.41
VRTN-202ENST00000557177 TRIM32Q13049 653 aa17.62■□□□□ 0.41
VRTN-202ENST00000557177 TRIM34Q9BYJ4 488 aa17.62■□□□□ 0.41
VRTN-202ENST00000557177 PEX10O60683 326 aa17.61■□□□□ 0.41
VRTN-202ENST00000557177 IDH1O75874 414 aaKnown RBP17.61■□□□□ 0.41
VRTN-202ENST00000557177 CYP7A1P22680 504 aa17.61■□□□□ 0.41
VRTN-202ENST00000557177 TATDN1Q6P1N9 297 aa17.61■□□□□ 0.41
VRTN-202ENST00000557177 CEP85Q6P2H3 762 aa17.61■□□□□ 0.41
VRTN-202ENST00000557177 CERS3Q8IU89 383 aa17.61■□□□□ 0.41
VRTN-202ENST00000557177 ANKLE1Q8NAG6 615 aa17.61■□□□□ 0.41
VRTN-202ENST00000557177 GPRC5AQ8NFJ5 357 aa17.61■□□□□ 0.41
VRTN-202ENST00000557177 DIS3LQ8TF46 1054 aaKnown RBP17.61■□□□□ 0.41
VRTN-202ENST00000557177 TRIB2Q92519 343 aa17.61■□□□□ 0.41
VRTN-202ENST00000557177 PAWRQ96IZ0 340 aaKnown RBP17.61■□□□□ 0.41
VRTN-202ENST00000557177 RPTORQ8N122 1335 aa17.61■□□□□ 0.41
VRTN-202ENST00000557177 EVI5O60447 810 aa17.6■□□□□ 0.41
VRTN-202ENST00000557177 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
VRTN-202ENST00000557177 MAP3K21Q5TCX8 1036 aa17.6■□□□□ 0.41
VRTN-202ENST00000557177 POTEEQ6S8J3 1075 aa17.6■□□□□ 0.41
VRTN-202ENST00000557177 NECAB2Q7Z6G3 386 aa17.6■□□□□ 0.41
VRTN-202ENST00000557177 MIGA1Q8NAN2 632 aa17.6■□□□□ 0.41
VRTN-202ENST00000557177 HMX1Q9NP08 348 aaPredicted RBP17.6■□□□□ 0.41
VRTN-202ENST00000557177 EMILIN3Q9NT22 766 aa17.6■□□□□ 0.41
VRTN-202ENST00000557177 RBPJLQ9UBG7 517 aa17.6■□□□□ 0.41
VRTN-202ENST00000557177 NDUFB9Q9Y6M9 179 aa17.6■□□□□ 0.41
VRTN-202ENST00000557177 GH2P01242 217 aa17.59■□□□□ 0.41
VRTN-202ENST00000557177 XRCC5P13010 732 aaKnown RBP17.59■□□□□ 0.41
VRTN-202ENST00000557177 MNX1P50219 401 aaPredicted RBP17.59■□□□□ 0.41
VRTN-202ENST00000557177 TMED8Q6PL24 325 aaPredicted RBP17.59■□□□□ 0.41
VRTN-202ENST00000557177 MAGEB6Q8N7X4 407 aa17.59■□□□□ 0.41
VRTN-202ENST00000557177 GTF3C2Q8WUA4 911 aaPredicted RBP17.59■□□□□ 0.41
VRTN-202ENST00000557177 SOCS4Q8WXH5 440 aa17.59■□□□□ 0.41
VRTN-202ENST00000557177 EHD4Q9H223 541 aa17.59■□□□□ 0.41
VRTN-202ENST00000557177 ANTXR1Q9H6X2 564 aa17.59■□□□□ 0.41
VRTN-202ENST00000557177 A0A1W2PPC1 479 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 CYP2B6P20813 491 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 MAPK4P31152 587 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 ERVK-9P63128 1117 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 ERVK-24P63145 666 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 Q3C1V9 767 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 USP6NLQ92738 828 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 C12orf42Q96LP6 360 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 NUDT12Q9BQG2 462 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 SERPINB13Q9UIV8 391 aa17.58■□□□□ 0.4
VRTN-202ENST00000557177 NAV1Q8NEY1 1877 aa17.57■□□□□ 0.4
VRTN-202ENST00000557177 USP5P45974 858 aa17.57■□□□□ 0.4
VRTN-202ENST00000557177 ERC1Q8IUD2 1116 aa17.57■□□□□ 0.4
VRTN-202ENST00000557177 PORCNQ9H237 461 aa17.57■□□□□ 0.4
VRTN-202ENST00000557177 OGDHLQ9ULD0 1010 aa17.57■□□□□ 0.4
VRTN-202ENST00000557177 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
VRTN-202ENST00000557177 PRKAR2AP13861 404 aaKnown RBP17.56■□□□□ 0.4
VRTN-202ENST00000557177 MAP3K12Q12852 859 aa17.56■□□□□ 0.4
VRTN-202ENST00000557177 MORN1Q5T089 497 aa17.56■□□□□ 0.4
VRTN-202ENST00000557177 AACSQ86V21 672 aa17.56■□□□□ 0.4
VRTN-202ENST00000557177 RIOK1Q9BRS2 568 aaKnown RBP17.56■□□□□ 0.4
VRTN-202ENST00000557177 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
VRTN-202ENST00000557177 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
VRTN-202ENST00000557177 TTC6Q86TZ1 520 aa17.55■□□□□ 0.4
VRTN-202ENST00000557177 TRMT44Q8IYL2 757 aaKnown RBP17.55■□□□□ 0.4
VRTN-202ENST00000557177 PAGR1Q9BTK6 254 aa17.55■□□□□ 0.4
VRTN-202ENST00000557177 NBPF3Q9H094 633 aa17.55■□□□□ 0.4
VRTN-202ENST00000557177 DNAH12Q6ZR08 3092 aa17.55■□□□□ 0.4
VRTN-202ENST00000557177 COL6A3P12111 3177 aa17.54■□□□□ 0.4
VRTN-202ENST00000557177 CNMDO75829 334 aa17.54■□□□□ 0.4
VRTN-202ENST00000557177 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
VRTN-202ENST00000557177 SHMT1P34896 483 aa17.54■□□□□ 0.4
VRTN-202ENST00000557177 PLCD1P51178 756 aa17.54■□□□□ 0.4
VRTN-202ENST00000557177 CACNB2Q08289 660 aaPredicted RBP17.54■□□□□ 0.4
VRTN-202ENST00000557177 ZYXQ15942 572 aaKnown RBP17.54■□□□□ 0.4
VRTN-202ENST00000557177 CERKLQ49MI3 558 aaPredicted RBP17.54■□□□□ 0.4
VRTN-202ENST00000557177 PLEKHH3Q7Z736 793 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms