RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 MIPEPQ99797 713 aa11.48□□□□□ -0.57
CCDC175-205ENST00000556996 SUPT16HQ9Y5B9 1047 aaKnown RBP11.48□□□□□ -0.57
CCDC175-205ENST00000556996 CST3P01034 146 aaPredicted RBP11.47□□□□□ -0.57
CCDC175-205ENST00000556996 NFXL1Q6ZNB6 911 aa11.47□□□□□ -0.57
CCDC175-205ENST00000556996 MRPL41Q8IXM3 137 aaKnown RBP11.47□□□□□ -0.57
CCDC175-205ENST00000556996 PLD6Q8N2A8 252 aaKnown RBP11.47□□□□□ -0.57
CCDC175-205ENST00000556996 TMEM87BQ96K49 555 aa11.47□□□□□ -0.57
CCDC175-205ENST00000556996 METTL5Q9NRN9 209 aaKnown RBP11.47□□□□□ -0.57
CCDC175-205ENST00000556996 CNTNAP4Q9C0A0 1308 aa11.46□□□□□ -0.57
CCDC175-205ENST00000556996 PLCG1P19174 1290 aa11.46□□□□□ -0.57
CCDC175-205ENST00000556996 PDE4BQ07343 736 aa11.46□□□□□ -0.57
CCDC175-205ENST00000556996 RIN3Q8TB24 985 aa11.46□□□□□ -0.57
CCDC175-205ENST00000556996 UBP1Q9NZI7 540 aa11.46□□□□□ -0.57
CCDC175-205ENST00000556996 ADAM30Q9UKF2 790 aa11.46□□□□□ -0.57
CCDC175-205ENST00000556996 OXCT1P55809 520 aa11.45□□□□□ -0.58
CCDC175-205ENST00000556996 LRRC3Q9BY71 257 aa11.45□□□□□ -0.58
CCDC175-205ENST00000556996 PRR36Q9H6K5 1346 aa11.44□□□□□ -0.58
CCDC175-205ENST00000556996 SCAMP3O14828 347 aaKnown RBP11.44□□□□□ -0.58
CCDC175-205ENST00000556996 HTR3BO95264 441 aa11.44□□□□□ -0.58
CCDC175-205ENST00000556996 USP48Q86UV5 1035 aa11.44□□□□□ -0.58
CCDC175-205ENST00000556996 METTL16Q86W50 562 aaKnown RBP11.44□□□□□ -0.58
CCDC175-205ENST00000556996 RNF34Q969K3 372 aa11.44□□□□□ -0.58
CCDC175-205ENST00000556996 REV1Q9UBZ9 1251 aa11.44□□□□□ -0.58
CCDC175-205ENST00000556996 UPK3BL1B0FP48 263 aa11.43□□□□□ -0.58
CCDC175-205ENST00000556996 UPK3BL2E5RIL1 263 aa11.43□□□□□ -0.58
CCDC175-205ENST00000556996 DNAJA2O60884 412 aa11.43□□□□□ -0.58
CCDC175-205ENST00000556996 ITIH2P19823 946 aa11.43□□□□□ -0.58
CCDC175-205ENST00000556996 LETMD1Q6P1Q0 360 aa11.43□□□□□ -0.58
CCDC175-205ENST00000556996 MCATQ8IVS2 390 aaKnown RBP11.43□□□□□ -0.58
CCDC175-205ENST00000556996 MFSD2AQ8NA29 543 aa11.43□□□□□ -0.58
CCDC175-205ENST00000556996 BRMS1Q9HCU9 246 aa11.43□□□□□ -0.58
CCDC175-205ENST00000556996 CCDC39Q9UFE4 941 aa11.43□□□□□ -0.58
CCDC175-205ENST00000556996 PLAGL2Q9UPG8 496 aa11.43□□□□□ -0.58
CCDC175-205ENST00000556996 PRNPP04156 253 aa11.42□□□□□ -0.58
CCDC175-205ENST00000556996 RACK1P63244 317 aaKnown RBP11.42□□□□□ -0.58
CCDC175-205ENST00000556996 TMEM201Q5SNT2 666 aa11.42□□□□□ -0.58
CCDC175-205ENST00000556996 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
CCDC175-205ENST00000556996 SLC6A19Q695T7 634 aa11.42□□□□□ -0.58
CCDC175-205ENST00000556996 EAF1Q96JC9 268 aaPredicted RBP11.42□□□□□ -0.58
CCDC175-205ENST00000556996 BSDC1Q9NW68 430 aaPredicted RBP11.42□□□□□ -0.58
CCDC175-205ENST00000556996 CEACAM5P06731 702 aa11.41□□□□□ -0.58
CCDC175-205ENST00000556996 HDLBPQ00341 1268 aaKnown RBP11.41□□□□□ -0.58
CCDC175-205ENST00000556996 CWF19L2Q2TBE0 894 aaKnown RBP11.41□□□□□ -0.58
CCDC175-205ENST00000556996 NBPF11Q86T75 865 aa11.41□□□□□ -0.58
CCDC175-205ENST00000556996 WFDC3Q8IUB2 231 aa11.41□□□□□ -0.58
CCDC175-205ENST00000556996 NETO1Q8TDF5 533 aa11.41□□□□□ -0.58
CCDC175-205ENST00000556996 SPON2Q9BUD6 331 aa11.41□□□□□ -0.58
CCDC175-205ENST00000556996 PRDM5Q9NQX1 630 aaPredicted RBP11.41□□□□□ -0.58
CCDC175-205ENST00000556996 PRR33A8MZF0 331 aa11.4□□□□□ -0.58
CCDC175-205ENST00000556996 SEZ6Q53EL9 994 aa11.4□□□□□ -0.58
CCDC175-205ENST00000556996 C9orf131Q5VYM1 1079 aa11.4□□□□□ -0.58
CCDC175-205ENST00000556996 KIAA0825Q8IV33 1275 aa11.4□□□□□ -0.58
CCDC175-205ENST00000556996 FAM13CQ8NE31 585 aa11.4□□□□□ -0.58
CCDC175-205ENST00000556996 KLHL3Q9UH77 587 aa11.4□□□□□ -0.58
CCDC175-205ENST00000556996 GTF2IRD1Q9UHL9 959 aa11.4□□□□□ -0.58
CCDC175-205ENST00000556996 IGF2BP3O00425 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC175-205ENST00000556996 ZNF574Q6ZN55 896 aaPredicted RBP11.39□□□□□ -0.59
CCDC175-205ENST00000556996 ARHGAP27Q6ZUM4 889 aa11.39□□□□□ -0.59
CCDC175-205ENST00000556996 CDH24Q86UP0 819 aa11.39□□□□□ -0.59
CCDC175-205ENST00000556996 VSIG10LQ86VR7 867 aa11.39□□□□□ -0.59
CCDC175-205ENST00000556996 MKNK2Q9HBH9 465 aa11.39□□□□□ -0.59
CCDC175-205ENST00000556996 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
CCDC175-205ENST00000556996 TPX2Q9ULW0 747 aaKnown RBP11.39□□□□□ -0.59
CCDC175-205ENST00000556996 PCDHB14Q9Y5E9 798 aa11.39□□□□□ -0.59
CCDC175-205ENST00000556996 ROBO2Q9HCK4 1378 aa11.39□□□□□ -0.59
CCDC175-205ENST00000556996 CHURC1-FNTBB4DL54 471 aa11.38□□□□□ -0.59
CCDC175-205ENST00000556996 APOBRQ0VD83 1088 aa11.38□□□□□ -0.59
CCDC175-205ENST00000556996 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
CCDC175-205ENST00000556996 DNAJB8Q8NHS0 232 aa11.38□□□□□ -0.59
CCDC175-205ENST00000556996 NT5C1AQ9BXI3 368 aa11.38□□□□□ -0.59
CCDC175-205ENST00000556996 MAPK8IP1Q9UQF2 711 aa11.38□□□□□ -0.59
CCDC175-205ENST00000556996 OAS3Q9Y6K5 1087 aaKnown RBP11.38□□□□□ -0.59
CCDC175-205ENST00000556996 WNT11O96014 354 aa11.37□□□□□ -0.59
CCDC175-205ENST00000556996 CD96P40200 585 aa11.37□□□□□ -0.59
CCDC175-205ENST00000556996 GP2P55259 537 aaKnown RBP11.37□□□□□ -0.59
CCDC175-205ENST00000556996 IFI16Q16666 785 aaKnown RBP11.37□□□□□ -0.59
CCDC175-205ENST00000556996 NKPD1Q17RQ9 610 aa11.37□□□□□ -0.59
CCDC175-205ENST00000556996 PPP1R13LQ8WUF5 828 aa11.37□□□□□ -0.59
CCDC175-205ENST00000556996 BCL7CQ8WUZ0 217 aaPredicted RBP11.37□□□□□ -0.59
CCDC175-205ENST00000556996 ANGEL1Q9UNK9 670 aaKnown RBP11.37□□□□□ -0.59
CCDC175-205ENST00000556996 CLCQ05315 142 aa11.36□□□□□ -0.59
CCDC175-205ENST00000556996 BNIP3Q12983 259 aa11.36□□□□□ -0.59
CCDC175-205ENST00000556996 CYB5D2Q8WUJ1 264 aa11.36□□□□□ -0.59
CCDC175-205ENST00000556996 TNKS2Q9H2K2 1166 aa11.36□□□□□ -0.59
CCDC175-205ENST00000556996 SPRED2Q7Z698 418 aa11.35□□□□□ -0.59
CCDC175-205ENST00000556996 FLCNQ8NFG4 579 aa11.35□□□□□ -0.59
CCDC175-205ENST00000556996 YARSP54577 528 aaKnown RBP11.34□□□□□ -0.59
CCDC175-205ENST00000556996 SFRP5Q5T4F7 317 aa11.34□□□□□ -0.59
CCDC175-205ENST00000556996 GK5Q6ZS86 529 aa11.34□□□□□ -0.59
CCDC175-205ENST00000556996 NT5DC4Q86YG4 428 aa11.34□□□□□ -0.59
CCDC175-205ENST00000556996 SLITRK4Q8IW52 837 aa11.34□□□□□ -0.59
CCDC175-205ENST00000556996 SLFN12Q8IYM2 578 aa11.34□□□□□ -0.59
CCDC175-205ENST00000556996 NKD1Q969G9 470 aa11.34□□□□□ -0.59
CCDC175-205ENST00000556996 PAK6Q9NQU5 681 aaPredicted RBP11.34□□□□□ -0.59
CCDC175-205ENST00000556996 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
CCDC175-205ENST00000556996 ATE1O95260 518 aa11.33□□□□□ -0.6
CCDC175-205ENST00000556996 ZNF865P0CJ78 1059 aaPredicted RBP11.33□□□□□ -0.6
CCDC175-205ENST00000556996 EHMT1Q9H9B1 1298 aa11.33□□□□□ -0.6
CCDC175-205ENST00000556996 CBX7O95931 251 aa11.32□□□□□ -0.6
CCDC175-205ENST00000556996 C22orf34Q6ZV56 151 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms