RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.89■□□□□ 0.93
CHGA-206ENST00000556876 DOCK1Q14185 1865 aa20.88■□□□□ 0.93
CHGA-206ENST00000556876 MAPK4P31152 587 aa20.88■□□□□ 0.93
CHGA-206ENST00000556876 FXR1P51114 621 aaKnown RBP eCLIP20.88■□□□□ 0.93
CHGA-206ENST00000556876 EAF2Q96CJ1 260 aaPredicted RBP20.88■□□□□ 0.93
CHGA-206ENST00000556876 DEFB118Q96PH6 123 aa20.88■□□□□ 0.93
CHGA-206ENST00000556876 CRISPLD2Q9H0B8 497 aa20.88■□□□□ 0.93
CHGA-206ENST00000556876 CCDC8Q9H0W5 538 aaPredicted RBP20.88■□□□□ 0.93
CHGA-206ENST00000556876 EHD4Q9H223 541 aa20.88■□□□□ 0.93
CHGA-206ENST00000556876 RPTORQ8N122 1335 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 XRCC5P13010 732 aaKnown RBP20.87■□□□□ 0.93
CHGA-206ENST00000556876 USP14P54578 494 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 PDE3AQ14432 1141 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 RRP1BQ14684 758 aaKnown RBP20.87■□□□□ 0.93
CHGA-206ENST00000556876 CEP85Q6P2H3 762 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 USP17L2Q6R6M4 530 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 NUDT12Q9BQG2 462 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 C1orf115Q9H7X2 142 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 HMX1Q9NP08 348 aaPredicted RBP20.87■□□□□ 0.93
CHGA-206ENST00000556876 PIH1D3Q9NQM4 214 aaKnown RBP20.87■□□□□ 0.93
CHGA-206ENST00000556876 SERPINB13Q9UIV8 391 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 GJD2Q9UKL4 321 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 ZBTB21Q9ULJ3 1066 aa20.87■□□□□ 0.93
CHGA-206ENST00000556876 EVI5O60447 810 aa20.86■□□□□ 0.93
CHGA-206ENST00000556876 HMMRO75330 724 aa20.86■□□□□ 0.93
CHGA-206ENST00000556876 HERVK_113P62684 666 aa20.86■□□□□ 0.93
CHGA-206ENST00000556876 NECAB2Q7Z6G3 386 aa20.86■□□□□ 0.93
CHGA-206ENST00000556876 ADGRA1Q86SQ6 560 aa20.86■□□□□ 0.93
CHGA-206ENST00000556876 A0A1W2PPC1 479 aa20.85■□□□□ 0.93
CHGA-206ENST00000556876 GLRX3O76003 335 aaKnown RBP20.85■□□□□ 0.93
CHGA-206ENST00000556876 TATDN1Q6P1N9 297 aa20.85■□□□□ 0.93
CHGA-206ENST00000556876 CLASRPQ8N2M8 674 aaKnown RBP20.85■□□□□ 0.93
CHGA-206ENST00000556876 MAGEB6Q8N7X4 407 aa20.85■□□□□ 0.93
CHGA-206ENST00000556876 P2RX7Q99572 595 aaKnown RBP20.85■□□□□ 0.93
CHGA-206ENST00000556876 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.85■□□□□ 0.93
CHGA-206ENST00000556876 DNAJC18Q9H819 358 aa20.85■□□□□ 0.93
CHGA-206ENST00000556876 CABP5Q9NP86 173 aa20.85■□□□□ 0.93
CHGA-206ENST00000556876 ZBED9Q6R2W3 1325 aa20.84■□□□□ 0.93
CHGA-206ENST00000556876 CCNA1P78396 465 aa20.84■□□□□ 0.93
CHGA-206ENST00000556876 CHRDL2Q6WN34 429 aa20.84■□□□□ 0.93
CHGA-206ENST00000556876 AACSQ86V21 672 aa20.84■□□□□ 0.93
CHGA-206ENST00000556876 RPAP2Q8IXW5 612 aaPredicted RBP20.84■□□□□ 0.93
CHGA-206ENST00000556876 C12orf42Q96LP6 360 aa20.84■□□□□ 0.93
CHGA-206ENST00000556876 SAP30BPQ9UHR5 308 aaKnown RBP20.84■□□□□ 0.93
CHGA-206ENST00000556876 CEP290O15078 2479 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 USP17L15C9J2P7 530 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 USP17L13C9JLJ4 530 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 USP17L11C9JVI0 530 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 USP17L18D6R9N7 530 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 USP17L22D6RA61 530 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 USP17L17D6RBQ6 530 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 USP17L19D6RCP7 530 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 USP17L20D6RJB6 530 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 RLBP1P12271 317 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 USP17L24Q0WX57 530 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 CERKLQ49MI3 558 aaPredicted RBP20.83■□□□□ 0.93
CHGA-206ENST00000556876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.83■□□□□ 0.93
CHGA-206ENST00000556876 KIF1BPQ96EK5 621 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 FEZ1Q99689 392 aa20.83■□□□□ 0.93
CHGA-206ENST00000556876 ZSWIM8A7E2V4 1837 aa20.83■□□□□ 0.92
CHGA-206ENST00000556876 GDF11O95390 407 aa20.82■□□□□ 0.92
CHGA-206ENST00000556876 GH2P01242 217 aa20.82■□□□□ 0.92
CHGA-206ENST00000556876 DYNLL1P63167 89 aaKnown RBP20.82■□□□□ 0.92
CHGA-206ENST00000556876 MIGA1Q8NAN2 632 aa20.82■□□□□ 0.92
CHGA-206ENST00000556876 CWC22Q9HCG8 908 aaKnown RBP20.82■□□□□ 0.92
CHGA-206ENST00000556876 TLR7Q9NYK1 1049 aaKnown RBP20.82■□□□□ 0.92
CHGA-206ENST00000556876 RABGAP1Q9Y3P9 1069 aa20.82■□□□□ 0.92
CHGA-206ENST00000556876 RAB11FIP3O75154 756 aa20.81■□□□□ 0.92
CHGA-206ENST00000556876 RGS2P41220 211 aa20.81■□□□□ 0.92
CHGA-206ENST00000556876 ERVK-9P63128 1117 aa20.81■□□□□ 0.92
CHGA-206ENST00000556876 ERVK-24P63145 666 aa20.81■□□□□ 0.92
CHGA-206ENST00000556876 CRNKL1Q9BZJ0 848 aaKnown RBP20.81■□□□□ 0.92
CHGA-206ENST00000556876 NBPF3Q9H094 633 aa20.81■□□□□ 0.92
CHGA-206ENST00000556876 KIAA1683Q9H0B3 1180 aa20.81■□□□□ 0.92
CHGA-206ENST00000556876 EMILIN3Q9NT22 766 aa20.81■□□□□ 0.92
CHGA-206ENST00000556876 DDX19BQ9UMR2 479 aa20.81■□□□□ 0.92
CHGA-206ENST00000556876 EXOC6BQ9Y2D4 811 aa20.81■□□□□ 0.92
CHGA-206ENST00000556876 POLR3DP05423 398 aaPredicted RBP20.8■□□□□ 0.92
CHGA-206ENST00000556876 ABCB5Q2M3G0 1257 aa20.8■□□□□ 0.92
CHGA-206ENST00000556876 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
CHGA-206ENST00000556876 MIER1Q8N108 512 aa20.8■□□□□ 0.92
CHGA-206ENST00000556876 RHPN1Q8TCX5 695 aa20.8■□□□□ 0.92
CHGA-206ENST00000556876 PAWRQ96IZ0 340 aaKnown RBP20.8■□□□□ 0.92
CHGA-206ENST00000556876 RBPJLQ9UBG7 517 aa20.8■□□□□ 0.92
CHGA-206ENST00000556876 PHIPQ8WWQ0 1821 aa20.8■□□□□ 0.92
CHGA-206ENST00000556876 PTPRFP10586 1907 aa20.79■□□□□ 0.92
CHGA-206ENST00000556876 MAGEB6P1A0A0J9YX57 407 aa20.79■□□□□ 0.92
CHGA-206ENST00000556876 IFIT2P09913 472 aaKnown RBP20.79■□□□□ 0.92
CHGA-206ENST00000556876 PLEKHH3Q7Z736 793 aa20.79■□□□□ 0.92
CHGA-206ENST00000556876 RBM27Q9P2N5 1060 aaKnown RBP20.79■□□□□ 0.92
CHGA-206ENST00000556876 ZKSCAN1P17029 563 aaPredicted RBP20.78■□□□□ 0.92
CHGA-206ENST00000556876 CYP2B6P20813 491 aa20.78■□□□□ 0.92
CHGA-206ENST00000556876 JAG1P78504 1218 aa20.78■□□□□ 0.92
CHGA-206ENST00000556876 RAB3GAP1Q15042 981 aa20.78■□□□□ 0.92
CHGA-206ENST00000556876 SLC9C2Q5TAH2 1124 aa20.78■□□□□ 0.92
CHGA-206ENST00000556876 MAP3K21Q5TCX8 1036 aa20.78■□□□□ 0.92
CHGA-206ENST00000556876 LBX2Q6XYB7 198 aa20.78■□□□□ 0.92
CHGA-206ENST00000556876 OGDHLQ9ULD0 1010 aa20.78■□□□□ 0.92
CHGA-206ENST00000556876 MGAMO43451 1857 aa20.77■□□□□ 0.92
CHGA-206ENST00000556876 LOC285556D6RIA3 1793 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 245.5 ms