RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 NACAP1Q9BZK3 213 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 DNAJC18Q9H819 358 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 HELLSQ9NRZ9 838 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 ATAD5Q96QE3 1844 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 USP17L5A8MUK1 530 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 PRKAB2O43741 272 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 PLCD1P51178 756 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 SBK1Q52WX2 424 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 C12orf60Q5U649 245 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 ERICH6BQ5W0A0 696 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 BRI3BPQ8WY22 251 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 RILPL2Q969X0 211 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 AFG3L2Q9Y4W6 797 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 ZHX2Q9Y6X8 837 aa12.65□□□□□ -0.38
MTHFD1-214ENST00000556771 BAZ2AQ9UIF9 1905 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 GSG1L2A8MUP6 293 aa12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 PATL2C9JE40 543 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 USP17L12C9JPN9 530 aa12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 USP17L21D6R901 530 aa12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 M0R2C6 588 aa12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 IGF2BP3O00425 579 aaKnown RBP eCLIP12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 SLURP2P0DP57 97 aa12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 PDE4AP27815 886 aa12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 LBX1P52954 281 aa12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 SLC4A8Q2Y0W8 1093 aa12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 FASTKD5Q7L8L6 764 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 ZBTB21Q9ULJ3 1066 aa12.64□□□□□ -0.39
MTHFD1-214ENST00000556771 PHIPQ8WWQ0 1821 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 A0A0G2JLL6 359 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 APPP05067 770 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 TDO2P48775 406 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 CERKLQ49MI3 558 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 TTC22Q5TAA0 569 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 CTR9Q6PD62 1173 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 PRRT2Q7Z6L0 340 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 ANKRD23Q86SG2 305 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 ZNF280CQ8ND82 737 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 CCDC136Q96JN2 1154 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 CCDC17Q96LX7 622 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 PTPN18Q99952 460 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 WDR18Q9BV38 432 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 CABP5Q9NP86 173 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 DIAPH3Q9NSV4 1193 aa12.63□□□□□ -0.39
MTHFD1-214ENST00000556771 ROBO3Q96MS0 1386 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 CYP2D6P10635 497 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 SDSP20132 328 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 SHMT1P34896 483 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 RRP1BQ14684 758 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 C16orf86Q6ZW13 317 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 PROCA1Q8NCQ7 364 aaPredicted RBP12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 NAPBQ9H115 298 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 ZFYVE28Q9HCC9 887 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 SLC45A1Q9Y2W3 748 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 PTPRFP10586 1907 aa12.62□□□□□ -0.39
MTHFD1-214ENST00000556771 MYH8P13535 1937 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 A0A0D9SFI3 127 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 TRIM75PA6NK02 468 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 C19orf81C9J6K1 198 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 BTBD19C9JJ37 291 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 GDF11O95390 407 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 TBC1D8O95759 1140 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 GH2P01242 217 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 SLC3A2P08195 630 aaKnown RBP12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 SPP2Q13103 211 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 NMIQ13287 307 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 TAF1CQ15572 869 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 SH3D19Q5HYK7 790 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 EPB41L4AQ9HCS5 686 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 TSKSQ9UJT2 592 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
MTHFD1-214ENST00000556771 GPR25O00155 361 aa12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 CDK8P49336 464 aa12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 BACE1P56817 501 aa12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 PABPC4Q13310 644 aaKnown RBP eCLIP12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 CRHR2Q13324 411 aa12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 MOGSQ13724 837 aa12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 ALX1Q15699 326 aa12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 FAM227BQ96M60 508 aa12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 AGTPBP1Q9UPW5 1226 aa12.6□□□□□ -0.39
MTHFD1-214ENST00000556771 LOC285556D6RIA3 1793 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 CYP2D7A0A087X1C5 515 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 MINDY4BA8MYZ0 360 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 USP17L10C9JJH3 530 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 PDHXO00330 501 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 USP14P54578 494 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 RAB3GAP1Q15042 981 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms