RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
XRCC3-216ENST00000556682 PTCH2Q9Y6C5 1203 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 ADGRA2Q96PE1 1338 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 TCRBV5S4A2TA0A5A2 114 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 USP17L10C9JJH3 530 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 GDF11O95390 407 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 ADD2P35612 726 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 GCLCP48506 637 aaPredicted RBP13.03□□□□□ -0.32
XRCC3-216ENST00000556682 BACE1P56817 501 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 CAP1Q01518 475 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 UBE3CQ15386 1083 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 CERKLQ49MI3 558 aaPredicted RBP13.03□□□□□ -0.32
XRCC3-216ENST00000556682 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
XRCC3-216ENST00000556682 AMOTL1Q8IY63 956 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 EDC3Q96F86 508 aaKnown RBP13.03□□□□□ -0.32
XRCC3-216ENST00000556682 MCM9Q9NXL9 1143 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 SRRDQ9UH36 339 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 ZBTB21Q9ULJ3 1066 aa13.03□□□□□ -0.32
XRCC3-216ENST00000556682 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
XRCC3-216ENST00000556682 MTMR2Q13614 643 aa13.02□□□□□ -0.33
XRCC3-216ENST00000556682 TREML2Q5T2D2 321 aa13.02□□□□□ -0.33
XRCC3-216ENST00000556682 TATDN1Q6P1N9 297 aa13.02□□□□□ -0.33
XRCC3-216ENST00000556682 RAET1EQ8TD07 263 aa13.02□□□□□ -0.33
XRCC3-216ENST00000556682 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
XRCC3-216ENST00000556682 ATP8A2Q9NTI2 1148 aa13.02□□□□□ -0.33
XRCC3-216ENST00000556682 ERC2O15083 957 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 MBD4O95243 580 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 GH2P01242 217 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
XRCC3-216ENST00000556682 AAMPQ13685 434 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 ABCB5Q2M3G0 1257 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 LRRFIP1Q32MZ4 808 aaKnown RBP13.01□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 LCORLQ8N3X6 602 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 ZNF333Q96JL9 665 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 ARMT1Q9H993 441 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 DCP1AQ9NPI6 582 aaPredicted RBP13.01□□□□□ -0.33
XRCC3-216ENST00000556682 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 MYPNQ86TC9 1320 aa13.01□□□□□ -0.33
XRCC3-216ENST00000556682 DOCK1Q14185 1865 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 TNPO2O14787 897 aaKnown RBP13□□□□□ -0.33
XRCC3-216ENST00000556682 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 HOXA7P31268 230 aaPredicted RBP13□□□□□ -0.33
XRCC3-216ENST00000556682 PLCD1P51178 756 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 USP14P54578 494 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 JAG1P78504 1218 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 FAM110CQ1W6H9 321 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 SDR42E1Q8WUS8 393 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 COA7Q96BR5 231 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 FEZ1Q99689 392 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 ASCC2Q9H1I8 757 aaPredicted RBP13□□□□□ -0.33
XRCC3-216ENST00000556682 SWAP70Q9UH65 585 aa13□□□□□ -0.33
XRCC3-216ENST00000556682 TTC41PQ6P2S7 1318 aa12.99□□□□□ -0.33
XRCC3-216ENST00000556682 GRK4P32298 578 aa12.99□□□□□ -0.33
XRCC3-216ENST00000556682 KBTBD3Q8NAB2 608 aa12.99□□□□□ -0.33
XRCC3-216ENST00000556682 GTF3C2Q8WUA4 911 aaPredicted RBP12.99□□□□□ -0.33
XRCC3-216ENST00000556682 CRBNQ96SW2 442 aa12.99□□□□□ -0.33
XRCC3-216ENST00000556682 BIN2Q9UBW5 565 aaPredicted RBP12.99□□□□□ -0.33
XRCC3-216ENST00000556682 SLC4A4Q9Y6R1 1079 aa12.99□□□□□ -0.33
XRCC3-216ENST00000556682 MPHOSPH10O00566 681 aaKnown RBP12.98□□□□□ -0.33
XRCC3-216ENST00000556682 GLRX3O76003 335 aaKnown RBP12.98□□□□□ -0.33
XRCC3-216ENST00000556682 ZFYP08048 801 aaPredicted RBP12.98□□□□□ -0.33
XRCC3-216ENST00000556682 CTGFP29279 349 aa12.98□□□□□ -0.33
XRCC3-216ENST00000556682 SHMT1P34896 483 aa12.98□□□□□ -0.33
XRCC3-216ENST00000556682 UBXN2AP68543 259 aa12.98□□□□□ -0.33
XRCC3-216ENST00000556682 PRKCZQ05513 592 aa12.98□□□□□ -0.33
XRCC3-216ENST00000556682 GABPAQ06546 454 aa12.98□□□□□ -0.33
XRCC3-216ENST00000556682 SH3TC2Q8TF17 1288 aa12.98□□□□□ -0.33
XRCC3-216ENST00000556682 POTEFA5A3E0 1075 aa12.97□□□□□ -0.33
XRCC3-216ENST00000556682 PRKAB2O43741 272 aa12.97□□□□□ -0.33
XRCC3-216ENST00000556682 FLT3LGP49771 235 aa12.97□□□□□ -0.33
XRCC3-216ENST00000556682 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-216ENST00000556682 CCAR1Q8IX12 1150 aaKnown RBP12.97□□□□□ -0.33
XRCC3-216ENST00000556682 SLAIN1Q8ND83 568 aa12.97□□□□□ -0.33
XRCC3-216ENST00000556682 GCC1Q96CN9 775 aa12.97□□□□□ -0.33
XRCC3-216ENST00000556682 CCDC17Q96LX7 622 aa12.97□□□□□ -0.33
XRCC3-216ENST00000556682 P2RX7Q99572 595 aaKnown RBP12.97□□□□□ -0.33
XRCC3-216ENST00000556682 KIAA1683Q9H0B3 1180 aa12.97□□□□□ -0.33
XRCC3-216ENST00000556682 PUS7LQ9H0K6 701 aaKnown RBP12.97□□□□□ -0.33
XRCC3-216ENST00000556682 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
XRCC3-216ENST00000556682 MYO5AQ9Y4I1 1855 aaKnown RBP12.97□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L15C9J2P7 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L13C9JLJ4 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L12C9JPN9 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L11C9JVI0 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L21D6R901 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L18D6R9N7 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L22D6RA61 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L17D6RBQ6 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L19D6RCP7 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L20D6RJB6 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 RNF113AO15541 343 aaKnown RBP12.96□□□□□ -0.33
XRCC3-216ENST00000556682 MYCP01106 439 aaPredicted RBP12.96□□□□□ -0.33
XRCC3-216ENST00000556682 HERVK_113P62684 666 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 USP17L24Q0WX57 530 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 SLFNL1Q499Z3 407 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 ANKRD45Q5TZF3 282 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms