RNA–Protein interactions for RNA: ENST00000556669.1

LINC02299-201, Transcript of long intergenic non-protein coding RNA 2299, humanhuman

TSL 5 BASIC

Gene LINC02299, Length 430 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02299-201ENST00000556669 PTCH2Q9Y6C5 1203 aa18.31■□□□□ 0.52
LINC02299-201ENST00000556669 SH3D19Q5HYK7 790 aa18.3■□□□□ 0.52
LINC02299-201ENST00000556669 TATDN1Q6P1N9 297 aa18.3■□□□□ 0.52
LINC02299-201ENST00000556669 PROCA1Q8NCQ7 364 aaPredicted RBP18.3■□□□□ 0.52
LINC02299-201ENST00000556669 TRIM47Q96LD4 638 aa18.3■□□□□ 0.52
LINC02299-201ENST00000556669 WDR18Q9BV38 432 aa18.3■□□□□ 0.52
LINC02299-201ENST00000556669 EHD4Q9H223 541 aa18.3■□□□□ 0.52
LINC02299-201ENST00000556669 SERPINB13Q9UIV8 391 aa18.3■□□□□ 0.52
LINC02299-201ENST00000556669 ZBTB21Q9ULJ3 1066 aa18.3■□□□□ 0.52
LINC02299-201ENST00000556669 DDX60LQ5H9U9 1706 aaKnown RBP18.29■□□□□ 0.52
LINC02299-201ENST00000556669 PRKAB2O43741 272 aa18.29■□□□□ 0.52
LINC02299-201ENST00000556669 PSMC4P43686 418 aa18.29■□□□□ 0.52
LINC02299-201ENST00000556669 KIF22Q14807 665 aa18.29■□□□□ 0.52
LINC02299-201ENST00000556669 ARHGEF6Q15052 776 aa18.29■□□□□ 0.52
LINC02299-201ENST00000556669 TTC6Q86TZ1 520 aa18.29■□□□□ 0.52
LINC02299-201ENST00000556669 AS3MTQ9HBK9 375 aa18.29■□□□□ 0.52
LINC02299-201ENST00000556669 DCP1AQ9NPI6 582 aaPredicted RBP18.29■□□□□ 0.52
LINC02299-201ENST00000556669 LOC285556D6RIA3 1793 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 MBD4O95243 580 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 GH2P01242 217 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 POLR3DP05423 398 aaPredicted RBP18.28■□□□□ 0.52
LINC02299-201ENST00000556669 SHMT1P34896 483 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 BACE1P56817 501 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 GABPAQ06546 454 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 MTMR2Q13614 643 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 OTUD7AQ8TE49 926 aaPredicted RBP18.28■□□□□ 0.52
LINC02299-201ENST00000556669 ARMC5Q96C12 935 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC02299-201ENST00000556669 GINM1Q9NU53 330 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 MCM9Q9NXL9 1143 aa18.28■□□□□ 0.52
LINC02299-201ENST00000556669 MKI67P46013 3256 aaKnown RBP18.28■□□□□ 0.52
LINC02299-201ENST00000556669 NAV1Q8NEY1 1877 aa18.27■□□□□ 0.52
LINC02299-201ENST00000556669 CYP2D6P10635 497 aa18.27■□□□□ 0.52
LINC02299-201ENST00000556669 PUS7LQ9H0K6 701 aaKnown RBP18.27■□□□□ 0.52
LINC02299-201ENST00000556669 TNRC18O15417 2968 aaPredicted RBP18.27■□□□□ 0.51
LINC02299-201ENST00000556669 SMIM22K7EJ46 135 aa18.26■□□□□ 0.51
LINC02299-201ENST00000556669 GNRH1P01148 92 aa18.26■□□□□ 0.51
LINC02299-201ENST00000556669 OSBPP22059 807 aa18.26■□□□□ 0.51
LINC02299-201ENST00000556669 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
LINC02299-201ENST00000556669 SRRDQ9UH36 339 aa18.26■□□□□ 0.51
LINC02299-201ENST00000556669 MYH7P12883 1935 aa18.25■□□□□ 0.51
LINC02299-201ENST00000556669 POTEFA5A3E0 1075 aa18.25■□□□□ 0.51
LINC02299-201ENST00000556669 USP17L10C9JJH3 530 aa18.25■□□□□ 0.51
LINC02299-201ENST00000556669 FMNL1O95466 1100 aaPredicted RBP18.25■□□□□ 0.51
LINC02299-201ENST00000556669 CERKLQ49MI3 558 aaPredicted RBP18.25■□□□□ 0.51
LINC02299-201ENST00000556669 KBTBD3Q8NAB2 608 aa18.25■□□□□ 0.51
LINC02299-201ENST00000556669 GPATCH3Q96I76 525 aa18.25■□□□□ 0.51
LINC02299-201ENST00000556669 ZNF333Q96JL9 665 aa18.25■□□□□ 0.51
LINC02299-201ENST00000556669 ASCC2Q9H1I8 757 aaPredicted RBP18.25■□□□□ 0.51
LINC02299-201ENST00000556669 KIAA0100Q14667 2235 aaKnown RBP18.25■□□□□ 0.51
LINC02299-201ENST00000556669 C19orf81C9J6K1 198 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 GUCY1A2P33402 732 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 ABCB5Q2M3G0 1257 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 SLC9C1Q4G0N8 1177 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 ANKRD13CQ8N6S4 541 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 SLC44A5Q8NCS7 719 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 PI4K2BQ8TCG2 481 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 SH3TC2Q8TF17 1288 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 DYNLL2Q96FJ2 89 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 EMILIN3Q9NT22 766 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 ATP8A2Q9NTI2 1148 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 PNMA3Q9UL41 463 aa18.24■□□□□ 0.51
LINC02299-201ENST00000556669 CYP2D7A0A087X1C5 515 aa18.23■□□□□ 0.51
LINC02299-201ENST00000556669 RAB3GAP1Q15042 981 aa18.23■□□□□ 0.51
LINC02299-201ENST00000556669 ZSCAN25Q6NSZ9 544 aa18.23■□□□□ 0.51
LINC02299-201ENST00000556669 OSBP2Q969R2 916 aa18.23■□□□□ 0.51
LINC02299-201ENST00000556669 TMOD4Q9NZQ9 345 aa18.23■□□□□ 0.51
LINC02299-201ENST00000556669 GABRQQ9UN88 632 aa18.23■□□□□ 0.51
LINC02299-201ENST00000556669 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
LINC02299-201ENST00000556669 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
LINC02299-201ENST00000556669 BAZ2AQ9UIF9 1905 aaKnown RBP18.22■□□□□ 0.51
LINC02299-201ENST00000556669 HOXD10P28358 340 aa18.22■□□□□ 0.51
LINC02299-201ENST00000556669 HOXA7P31268 230 aaPredicted RBP18.22■□□□□ 0.51
LINC02299-201ENST00000556669 PRMT2P55345 433 aa18.22■□□□□ 0.51
LINC02299-201ENST00000556669 FCGRTP55899 365 aa18.22■□□□□ 0.51
LINC02299-201ENST00000556669 PRKCZQ05513 592 aa18.22■□□□□ 0.51
LINC02299-201ENST00000556669 PABPC4Q13310 644 aaKnown RBP eCLIP18.22■□□□□ 0.51
LINC02299-201ENST00000556669 HDAC1Q13547 482 aaPredicted RBP18.22■□□□□ 0.51
LINC02299-201ENST00000556669 ACER1Q8TDN7 264 aa18.22■□□□□ 0.51
LINC02299-201ENST00000556669 P2RX7Q99572 595 aaKnown RBP18.22■□□□□ 0.51
LINC02299-201ENST00000556669 SLC4A4Q9Y6R1 1079 aa18.22■□□□□ 0.51
LINC02299-201ENST00000556669 MGAMO43451 1857 aa18.22■□□□□ 0.51
LINC02299-201ENST00000556669 MYPNQ86TC9 1320 aa18.22■□□□□ 0.51
LINC02299-201ENST00000556669 USP17L12C9JPN9 530 aa18.21■□□□□ 0.51
LINC02299-201ENST00000556669 USP17L21D6R901 530 aa18.21■□□□□ 0.51
LINC02299-201ENST00000556669 RNF113AO15541 343 aaKnown RBP18.21■□□□□ 0.51
LINC02299-201ENST00000556669 PEX10O60683 326 aa18.21■□□□□ 0.51
LINC02299-201ENST00000556669 SEPT2Q15019 361 aa18.21■□□□□ 0.51
LINC02299-201ENST00000556669 ZYXQ15942 572 aaKnown RBP18.21■□□□□ 0.51
LINC02299-201ENST00000556669 FAM110CQ1W6H9 321 aa18.21■□□□□ 0.51
LINC02299-201ENST00000556669 ANKRD45Q5TZF3 282 aa18.21■□□□□ 0.51
LINC02299-201ENST00000556669 C12orf60Q5U649 245 aa18.21■□□□□ 0.51
LINC02299-201ENST00000556669 NBPF11Q86T75 865 aa18.21■□□□□ 0.51
LINC02299-201ENST00000556669 STRBPQ96SI9 672 aaKnown RBP18.21■□□□□ 0.51
LINC02299-201ENST00000556669 MYCP01106 439 aaPredicted RBP18.2■□□□□ 0.5
LINC02299-201ENST00000556669 MX1P20591 662 aa18.2■□□□□ 0.5
LINC02299-201ENST00000556669 GCLCP48506 637 aaPredicted RBP18.2■□□□□ 0.5
LINC02299-201ENST00000556669 USP17L2Q6R6M4 530 aa18.2■□□□□ 0.5
LINC02299-201ENST00000556669 POTEEQ6S8J3 1075 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms