RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SLBPQ14493 270 aaKnown RBP eCLIP7.13□□□□□ -1.27
SCFD1-218ENST00000556256 INPP5AQ14642 412 aa7.13□□□□□ -1.27
SCFD1-218ENST00000556256 TTC6Q86TZ1 520 aa7.13□□□□□ -1.27
SCFD1-218ENST00000556256 RIN3Q8TB24 985 aa7.13□□□□□ -1.27
SCFD1-218ENST00000556256 UBE2FQ969M7 185 aa7.13□□□□□ -1.27
SCFD1-218ENST00000556256 FBRSQ9HAH7 460 aa7.13□□□□□ -1.27
SCFD1-218ENST00000556256 SLAMF8Q9P0V8 285 aa7.13□□□□□ -1.27
SCFD1-218ENST00000556256 SMG5Q9UPR3 1016 aaKnown RBP7.13□□□□□ -1.27
SCFD1-218ENST00000556256 USTQ9Y2C2 406 aa7.13□□□□□ -1.27
SCFD1-218ENST00000556256 TCAF2A6NFQ2 919 aa7.12□□□□□ -1.27
SCFD1-218ENST00000556256 CTSWP56202 376 aa7.12□□□□□ -1.27
SCFD1-218ENST00000556256 LLGL2Q6P1M3 1020 aa7.12□□□□□ -1.27
SCFD1-218ENST00000556256 TXNDC2Q86VQ3 553 aa7.12□□□□□ -1.27
SCFD1-218ENST00000556256 KCNN1Q92952 543 aa7.12□□□□□ -1.27
SCFD1-218ENST00000556256 ELMO3Q96BJ8 720 aa7.12□□□□□ -1.27
SCFD1-218ENST00000556256 MIPEPQ99797 713 aa7.12□□□□□ -1.27
SCFD1-218ENST00000556256 CEP44Q9C0F1 390 aa7.12□□□□□ -1.27
SCFD1-218ENST00000556256 CBX7O95931 251 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 RAC2P15153 192 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 GLDCP23378 1020 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 ERVFC1P60507 584 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 LRRC14Q15048 493 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 NKG7Q16617 165 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 SCARA3Q6AZY7 606 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 THAP5Q7Z6K1 395 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 C1orf115Q9H7X2 142 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 ZSWIM5Q9P217 1185 aa7.11□□□□□ -1.27
SCFD1-218ENST00000556256 DNAJC25-GNG10A0A024R161 153 aa7.1□□□□□ -1.27
SCFD1-218ENST00000556256 FBXO24O75426 580 aa7.1□□□□□ -1.27
SCFD1-218ENST00000556256 RALGPS1Q5JS13 557 aa7.1□□□□□ -1.27
SCFD1-218ENST00000556256 LRFN4Q6PJG9 635 aa7.1□□□□□ -1.27
SCFD1-218ENST00000556256 TMC7Q7Z402 723 aa7.1□□□□□ -1.27
SCFD1-218ENST00000556256 MFSD2AQ8NA29 543 aa7.1□□□□□ -1.27
SCFD1-218ENST00000556256 C20orf173Q96LM9 149 aa7.1□□□□□ -1.27
SCFD1-218ENST00000556256 PRAMEF27A3QJZ7 478 aa7.09□□□□□ -1.27
SCFD1-218ENST00000556256 NUAK1O60285 661 aa7.09□□□□□ -1.27
SCFD1-218ENST00000556256 HOXA5P20719 270 aa7.09□□□□□ -1.27
SCFD1-218ENST00000556256 GSTT1P30711 240 aa7.09□□□□□ -1.27
SCFD1-218ENST00000556256 CAP2P40123 477 aa7.09□□□□□ -1.27
SCFD1-218ENST00000556256 PTPN11Q06124 597 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-218ENST00000556256 DSC3Q14574 896 aa7.09□□□□□ -1.27
SCFD1-218ENST00000556256 LETMD1Q6P1Q0 360 aa7.09□□□□□ -1.27
SCFD1-218ENST00000556256 MYLIPQ8WY64 445 aa7.09□□□□□ -1.27
SCFD1-218ENST00000556256 CYP8B1Q9UNU6 501 aa7.09□□□□□ -1.27
SCFD1-218ENST00000556256 PNMA6FA0A0J9YX94 578 aa7.08□□□□□ -1.28
SCFD1-218ENST00000556256 HK2P52789 917 aa7.08□□□□□ -1.28
SCFD1-218ENST00000556256 LINC00310P59036 64 aa7.08□□□□□ -1.28
SCFD1-218ENST00000556256 SLC26A8Q96RN1 970 aa7.08□□□□□ -1.28
SCFD1-218ENST00000556256 WNT10AQ9GZT5 417 aa7.08□□□□□ -1.28
SCFD1-218ENST00000556256 PPM1HQ9ULR3 514 aa7.08□□□□□ -1.28
SCFD1-218ENST00000556256 ESR1P03372 595 aa7.07□□□□□ -1.28
SCFD1-218ENST00000556256 PLCB3Q01970 1234 aa7.07□□□□□ -1.28
SCFD1-218ENST00000556256 TNK2Q07912 1038 aa7.07□□□□□ -1.28
SCFD1-218ENST00000556256 ENOX2Q16206 610 aaKnown RBP7.07□□□□□ -1.28
SCFD1-218ENST00000556256 HDXQ7Z353 690 aa7.07□□□□□ -1.28
SCFD1-218ENST00000556256 PLPPR2Q96GM1 343 aa7.07□□□□□ -1.28
SCFD1-218ENST00000556256 IRF2BPLQ9H1B7 796 aa7.07□□□□□ -1.28
SCFD1-218ENST00000556256 ADAMTS10Q9H324 1103 aa7.07□□□□□ -1.28
SCFD1-218ENST00000556256 TMEM59LQ9UK28 342 aa7.07□□□□□ -1.28
SCFD1-218ENST00000556256 HPXP02790 462 aa7.06□□□□□ -1.28
SCFD1-218ENST00000556256 ZNF746Q6NUN9 644 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-218ENST00000556256 HID1Q8IV36 788 aa7.06□□□□□ -1.28
SCFD1-218ENST00000556256 OSBPL7Q9BZF2 842 aa7.06□□□□□ -1.28
SCFD1-218ENST00000556256 WASH4PA8MWX3 477 aa7.05□□□□□ -1.28
SCFD1-218ENST00000556256 SRFP11831 508 aa7.05□□□□□ -1.28
SCFD1-218ENST00000556256 TRHRP34981 398 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-218ENST00000556256 ETF1P62495 437 aaKnown RBP7.05□□□□□ -1.28
SCFD1-218ENST00000556256 PRAMEF13Q5VWM6 474 aa7.05□□□□□ -1.28
SCFD1-218ENST00000556256 PCNX4Q63HM2 1172 aa7.05□□□□□ -1.28
SCFD1-218ENST00000556256 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-218ENST00000556256 TMPRSS7Q7RTY8 843 aa7.05□□□□□ -1.28
SCFD1-218ENST00000556256 CDH24Q86UP0 819 aa7.05□□□□□ -1.28
SCFD1-218ENST00000556256 XAGE3Q8WTP9 111 aa7.05□□□□□ -1.28
SCFD1-218ENST00000556256 CST3P01034 146 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-218ENST00000556256 CYP7A1P22680 504 aa7.04□□□□□ -1.28
SCFD1-218ENST00000556256 KIR3DL1P43629 444 aa7.04□□□□□ -1.28
SCFD1-218ENST00000556256 CDK8P49336 464 aa7.04□□□□□ -1.28
SCFD1-218ENST00000556256 ANKRD24Q8TF21 1146 aa7.04□□□□□ -1.28
SCFD1-218ENST00000556256 RELTQ969Z4 430 aa7.04□□□□□ -1.28
SCFD1-218ENST00000556256 SRCIN1Q9C0H9 1055 aa7.04□□□□□ -1.28
SCFD1-218ENST00000556256 PARD6AQ9NPB6 346 aa7.04□□□□□ -1.28
SCFD1-218ENST00000556256 TREHO43280 583 aa7.03□□□□□ -1.28
SCFD1-218ENST00000556256 CELA3AP09093 270 aa7.03□□□□□ -1.28
SCFD1-218ENST00000556256 COX4I2Q96KJ9 171 aa7.03□□□□□ -1.28
SCFD1-218ENST00000556256 RNF32Q9H0A6 362 aa7.03□□□□□ -1.28
SCFD1-218ENST00000556256 SP110Q9HB58 689 aa7.03□□□□□ -1.28
SCFD1-218ENST00000556256 SNCAIPQ9Y6H5 919 aa7.03□□□□□ -1.28
SCFD1-218ENST00000556256 SOWAHDA6NJG2 315 aa7.02□□□□□ -1.29
SCFD1-218ENST00000556256 CREG2Q8IUH2 290 aa7.02□□□□□ -1.29
SCFD1-218ENST00000556256 PIWIL2Q8TC59 973 aaKnown RBP7.02□□□□□ -1.29
SCFD1-218ENST00000556256 C19orf44Q9H6X5 657 aa7.02□□□□□ -1.29
SCFD1-218ENST00000556256 DCTN4Q9UJW0 460 aa7.02□□□□□ -1.29
SCFD1-218ENST00000556256 GRK4P32298 578 aa7.01□□□□□ -1.29
SCFD1-218ENST00000556256 WIPI1Q5MNZ9 446 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-218ENST00000556256 GAL3ST3Q96A11 431 aa7.01□□□□□ -1.29
SCFD1-218ENST00000556256 MCOLN1Q9GZU1 580 aa7.01□□□□□ -1.29
SCFD1-218ENST00000556256 DUSP15Q9H1R2 295 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-218ENST00000556256 JAG2Q9Y219 1238 aa7.01□□□□□ -1.29
SCFD1-218ENST00000556256 BMP7P18075 431 aa7□□□□□ -1.29
SCFD1-218ENST00000556256 DLG4P78352 724 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms