RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 BCAR3O75815 825 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 PDE3AQ14432 1141 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 MAPKAPK5Q8IW41 473 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 CCAR1Q8IX12 1150 aaKnown RBP20.73■□□□□ 0.91
XRCC3-215ENST00000555964 FTSJ3Q8IY81 847 aaKnown RBP20.73■□□□□ 0.91
XRCC3-215ENST00000555964 TMEM57Q8N5G2 664 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 GPRC5AQ8NFJ5 357 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 SSH3Q8TE77 659 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 PAWRQ96IZ0 340 aaKnown RBP20.73■□□□□ 0.91
XRCC3-215ENST00000555964 DBNDD2Q9BQY9 259 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 SNRKQ9NRH2 765 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 GJD2Q9UKL4 321 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 PLXNB2O15031 1838 aa20.73■□□□□ 0.91
XRCC3-215ENST00000555964 SURF6O75683 361 aaKnown RBP20.72■□□□□ 0.91
XRCC3-215ENST00000555964 RRP1BQ14684 758 aaKnown RBP20.72■□□□□ 0.91
XRCC3-215ENST00000555964 TMED8Q6PL24 325 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-215ENST00000555964 NUDT12Q9BQG2 462 aa20.72■□□□□ 0.91
XRCC3-215ENST00000555964 ZBTB21Q9ULJ3 1066 aa20.72■□□□□ 0.91
XRCC3-215ENST00000555964 DDX60LQ5H9U9 1706 aaKnown RBP20.71■□□□□ 0.91
XRCC3-215ENST00000555964 CYP2E1P05181 493 aaPredicted RBP20.71■□□□□ 0.91
XRCC3-215ENST00000555964 XRCC5P13010 732 aaKnown RBP20.71■□□□□ 0.91
XRCC3-215ENST00000555964 MAPK4P31152 587 aa20.71■□□□□ 0.91
XRCC3-215ENST00000555964 HERVK_113P62684 666 aa20.71■□□□□ 0.91
XRCC3-215ENST00000555964 ATP8B2P98198 1209 aa20.71■□□□□ 0.91
XRCC3-215ENST00000555964 NBPF3Q9H094 633 aa20.71■□□□□ 0.91
XRCC3-215ENST00000555964 USP17L2Q6R6M4 530 aa20.69■□□□□ 0.9
XRCC3-215ENST00000555964 P2RX7Q99572 595 aaKnown RBP20.69■□□□□ 0.9
XRCC3-215ENST00000555964 DNAJC18Q9H819 358 aa20.69■□□□□ 0.9
XRCC3-215ENST00000555964 PALD1Q9ULE6 856 aa20.69■□□□□ 0.9
XRCC3-215ENST00000555964 TNNQ9UQP3 1299 aa20.69■□□□□ 0.9
XRCC3-215ENST00000555964 RANBP2P49792 3224 aaKnown RBP20.68■□□□□ 0.9
XRCC3-215ENST00000555964 GDF11O95390 407 aa20.68■□□□□ 0.9
XRCC3-215ENST00000555964 ZKSCAN1P17029 563 aaPredicted RBP20.68■□□□□ 0.9
XRCC3-215ENST00000555964 CYP2B6P20813 491 aa20.68■□□□□ 0.9
XRCC3-215ENST00000555964 CYP7A1P22680 504 aa20.68■□□□□ 0.9
XRCC3-215ENST00000555964 ZAP70P43403 619 aa20.68■□□□□ 0.9
XRCC3-215ENST00000555964 ADGRA1Q86SQ6 560 aa20.68■□□□□ 0.9
XRCC3-215ENST00000555964 CWC22Q9HCG8 908 aaKnown RBP20.68■□□□□ 0.9
XRCC3-215ENST00000555964 NOP58Q9Y2X3 529 aaKnown RBP20.68■□□□□ 0.9
XRCC3-215ENST00000555964 IDH1O75874 414 aaKnown RBP20.67■□□□□ 0.9
XRCC3-215ENST00000555964 PRKAR2AP13861 404 aaKnown RBP20.67■□□□□ 0.9
XRCC3-215ENST00000555964 RGS2P41220 211 aa20.67■□□□□ 0.9
XRCC3-215ENST00000555964 USP5P45974 858 aa20.67■□□□□ 0.9
XRCC3-215ENST00000555964 ERVK-9P63128 1117 aa20.67■□□□□ 0.9
XRCC3-215ENST00000555964 ERVK-24P63145 666 aa20.67■□□□□ 0.9
XRCC3-215ENST00000555964 ITPRIPQ8IWB1 547 aa20.67■□□□□ 0.9
XRCC3-215ENST00000555964 DIS3LQ8TF46 1054 aaKnown RBP20.67■□□□□ 0.9
XRCC3-215ENST00000555964 TRIB2Q92519 343 aa20.67■□□□□ 0.9
XRCC3-215ENST00000555964 FEZ1Q99689 392 aa20.67■□□□□ 0.9
XRCC3-215ENST00000555964 C11orf49Q9H6J7 331 aa20.67■□□□□ 0.9
XRCC3-215ENST00000555964 SAP30BPQ9UHR5 308 aaKnown RBP20.67■□□□□ 0.9
XRCC3-215ENST00000555964 DBNLQ9UJU6 430 aaKnown RBP20.67■□□□□ 0.9
XRCC3-215ENST00000555964 OGDHLQ9ULD0 1010 aa20.67■□□□□ 0.9
XRCC3-215ENST00000555964 SZT2Q5T011 3432 aa20.66■□□□□ 0.9
XRCC3-215ENST00000555964 GLRX3O76003 335 aaKnown RBP20.66■□□□□ 0.9
XRCC3-215ENST00000555964 USP14P54578 494 aa20.66■□□□□ 0.9
XRCC3-215ENST00000555964 CCNA1P78396 465 aa20.66■□□□□ 0.9
XRCC3-215ENST00000555964 MAP3K12Q12852 859 aa20.66■□□□□ 0.9
XRCC3-215ENST00000555964 MAP3K21Q5TCX8 1036 aa20.66■□□□□ 0.9
XRCC3-215ENST00000555964 ERC1Q8IUD2 1116 aa20.66■□□□□ 0.9
XRCC3-215ENST00000555964 C7orf61Q8IZ16 206 aa20.66■□□□□ 0.9
XRCC3-215ENST00000555964 EHD4Q9H223 541 aa20.66■□□□□ 0.9
XRCC3-215ENST00000555964 PIH1D3Q9NQM4 214 aaKnown RBP20.66■□□□□ 0.9
XRCC3-215ENST00000555964 BMP8BP34820 402 aa20.65■□□□□ 0.9
XRCC3-215ENST00000555964 TTC6Q86TZ1 520 aa20.65■□□□□ 0.9
XRCC3-215ENST00000555964 C12orf42Q96LP6 360 aa20.65■□□□□ 0.9
XRCC3-215ENST00000555964 APBA2Q99767 749 aa20.65■□□□□ 0.9
XRCC3-215ENST00000555964 PAGR1Q9BTK6 254 aa20.65■□□□□ 0.9
XRCC3-215ENST00000555964 TXNRD2Q9NNW7 524 aa20.65■□□□□ 0.9
XRCC3-215ENST00000555964 STAP2Q9UGK3 403 aa20.65■□□□□ 0.9
XRCC3-215ENST00000555964 SERPINB13Q9UIV8 391 aa20.65■□□□□ 0.9
XRCC3-215ENST00000555964 GH2P01242 217 aa20.64■□□□□ 0.89
XRCC3-215ENST00000555964 TRIM32Q13049 653 aa20.64■□□□□ 0.89
XRCC3-215ENST00000555964 GPR142Q7Z601 462 aa20.64■□□□□ 0.89
XRCC3-215ENST00000555964 PLEKHH3Q7Z736 793 aa20.64■□□□□ 0.89
XRCC3-215ENST00000555964 C1orf115Q9H7X2 142 aa20.64■□□□□ 0.89
XRCC3-215ENST00000555964 NAV1Q8NEY1 1877 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 USP17L15C9J2P7 530 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 USP17L13C9JLJ4 530 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 USP17L11C9JVI0 530 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 USP17L18D6R9N7 530 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 USP17L22D6RA61 530 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 USP17L17D6RBQ6 530 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 USP17L19D6RCP7 530 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 USP17L20D6RJB6 530 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 DYNLL1P63167 89 aaKnown RBP20.63■□□□□ 0.89
XRCC3-215ENST00000555964 USP17L24Q0WX57 530 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 TATDN1Q6P1N9 297 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 MAGEB6Q8N7X4 407 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 CCDC8Q9H0W5 538 aaPredicted RBP20.63■□□□□ 0.89
XRCC3-215ENST00000555964 CABP5Q9NP86 173 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 EMILIN3Q9NT22 766 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 RBPJLQ9UBG7 517 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 RABGAP1Q9Y3P9 1069 aa20.63■□□□□ 0.89
XRCC3-215ENST00000555964 JAG1P78504 1218 aa20.62■□□□□ 0.89
XRCC3-215ENST00000555964 HSP90AB4PQ58FF6 505 aa20.62■□□□□ 0.89
XRCC3-215ENST00000555964 MIGA1Q8NAN2 632 aa20.62■□□□□ 0.89
XRCC3-215ENST00000555964 FRMPD3Q5JV73 1810 aa20.62■□□□□ 0.89
XRCC3-215ENST00000555964 RAB3GAP1Q15042 981 aa20.61■□□□□ 0.89
XRCC3-215ENST00000555964 TTF1Q15361 905 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms