RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	COLQ	Q9Y215	455 aa	Predicted RBP	13.46	□□□□□ -0.25
RAD51B-222	ENST00000555907	UNCX	A6NJT0	531 aa		13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	APP	P05067	770 aa		13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	SLC4A8	Q2Y0W8	1093 aa		13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	RNF20	Q5VTR2	975 aa		13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	CREB3L3	Q68CJ9	461 aa		13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	DDRGK1	Q96HY6	314 aa		13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	ANAPC4	Q9UJX5	808 aa		13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	ZSWIM8	A7E2V4	1837 aa		13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	LAMB1	P07942	1786 aa		13.45	□□□□□ -0.26
RAD51B-222	ENST00000555907	SLC27A2	O14975	620 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	ENTPD3	O75355	529 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	CYP21A2	P08686	494 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	ZBTB48	P10074	688 aa	Predicted RBP	13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	USP5	P45974	858 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	INHBE	P58166	350 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	SP3	Q02447	781 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	OTUD7B	Q6GQQ9	843 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	ANKRD13A	Q8IZ07	590 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	TGFBRAP1	Q8WUH2	860 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	SDR42E1	Q8WUS8	393 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	NAPB	Q9H115	298 aa		13.44	□□□□□ -0.26
RAD51B-222	ENST00000555907	ZNF213	O14771	459 aa		13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	FGR	P09769	529 aa		13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	ZKSCAN1	P17029	563 aa	Predicted RBP	13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	NT5C2	P49902	561 aa		13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	IMMT	Q16891	758 aa	Known RBP	13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	C12orf60	Q5U649	245 aa		13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	CTR9	Q6PD62	1173 aa		13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	FAM83A	Q86UY5	434 aa		13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	PTPN18	Q99952	460 aa		13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	TM6SF1	Q9BZW5	370 aa		13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	PTCH2	Q9Y6C5	1203 aa		13.43	□□□□□ -0.26
RAD51B-222	ENST00000555907	FLT1	P17948	1338 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	USP17L12	C9JPN9	530 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	USP17L21	D6R901	530 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	PC	P11498	1178 aa	Known RBP	13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	TDO2	P48775	406 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	KRT32	Q14532	448 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	SLC9C1	Q4G0N8	1177 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	MAPKAPK5	Q8IW41	473 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	RASEF	Q8IZ41	740 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	OPTN	Q96CV9	577 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	KIF2C	Q99661	725 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	DHX36	Q9H2U1	1008 aa	Known RBP	13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	DDX4	Q9NQI0	724 aa	Known RBP	13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	FAM198A	Q9UFP1	575 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	SNX14	Q9Y5W7	946 aa		13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	COL2A1	P02458	1487 aa	Predicted RBP	13.42	□□□□□ -0.26
RAD51B-222	ENST00000555907	MAP3K9	P80192	1104 aa		13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	NFIA	Q12857	509 aa		13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	TAF1C	Q15572	869 aa	Predicted RBP	13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	TTC6	Q86TZ1	520 aa		13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	SH3TC2	Q8TF17	1288 aa		13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	FAM151A	Q8WW52	585 aa		13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	ARMC5	Q96C12	935 aa		13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	MCM9	Q9NXL9	1143 aa		13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	PALD1	Q9ULE6	856 aa		13.41	□□□□□ -0.26
RAD51B-222	ENST00000555907	MKI67	P46013	3256 aa	Known RBP	13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907		H0YGN5	161 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	PSMA5	P28066	241 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	PPARA	Q07869	468 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	TCP10	Q12799	353 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	METTL16	Q86W50	562 aa	Known RBP	13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	AMOTL1	Q8IY63	956 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	HOOK2	Q96ED9	719 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	ZNF333	Q96JL9	665 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	NBPF3	Q9H094	633 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	TSHZ2	Q9NRE2	1034 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	CSAD	Q9Y600	493 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	FOCAD	Q5VW36	1801 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	ATRNL1	Q5VV63	1379 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	CDK5RAP2	Q96SN8	1893 aa		13.4	□□□□□ -0.26
RAD51B-222	ENST00000555907	MINDY4B	A8MYZ0	360 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907		E7EWF7	191 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	SLC3A2	P08195	630 aa	Known RBP	13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	VGLL4	Q14135	290 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	AKNAD1	Q5T1N1	836 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	CHRDL2	Q6WN34	429 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	MIGA2	Q7L4E1	593 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	ZFPM1	Q8IX07	1006 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	STAG1	Q8WVM7	1258 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	ARHGAP39	Q9C0H5	1083 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	EHD4	Q9H223	541 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	RNF41	Q9H4P4	317 aa	Predicted RBP	13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	HTT	P42858	3142 aa		13.39	□□□□□ -0.27
RAD51B-222	ENST00000555907	ROBO3	Q96MS0	1386 aa		13.38	□□□□□ -0.27
RAD51B-222	ENST00000555907	CCL15-CCL14	A0A0B4J2E2	113 aa		13.38	□□□□□ -0.27
RAD51B-222	ENST00000555907	POLR3D	P05423	398 aa	Predicted RBP	13.38	□□□□□ -0.27
RAD51B-222	ENST00000555907	HMGB1	P09429	215 aa	Known RBP	13.38	□□□□□ -0.27
RAD51B-222	ENST00000555907	PLCD1	P51178	756 aa		13.38	□□□□□ -0.27
RAD51B-222	ENST00000555907	MAP3K10	Q02779	954 aa		13.38	□□□□□ -0.27
RAD51B-222	ENST00000555907	GABPA	Q06546	454 aa		13.38	□□□□□ -0.27
RAD51B-222	ENST00000555907	PICALM	Q13492	652 aa		13.38	□□□□□ -0.27

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