RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 KCT2Q8NC54 265 aa8.99□□□□□ -0.97
VRK1-205ENST00000555402 GRIN3AQ8TCU5 1115 aa8.99□□□□□ -0.97
VRK1-205ENST00000555402 CCDC120Q96HB5 630 aa8.99□□□□□ -0.97
VRK1-205ENST00000555402 CNTNAP4Q9C0A0 1308 aa8.99□□□□□ -0.97
VRK1-205ENST00000555402 LRIG2O94898 1065 aa8.98□□□□□ -0.97
VRK1-205ENST00000555402 SLITRK5O94991 958 aa8.98□□□□□ -0.97
VRK1-205ENST00000555402 MED14OSP0DP75 135 aa8.98□□□□□ -0.97
VRK1-205ENST00000555402 BMP6P22004 513 aa8.98□□□□□ -0.97
VRK1-205ENST00000555402 C22orf34Q6ZV56 151 aa8.98□□□□□ -0.97
VRK1-205ENST00000555402 EPB41L4BQ9H329 900 aa8.98□□□□□ -0.97
VRK1-205ENST00000555402 H3BS24 57 aa8.97□□□□□ -0.97
VRK1-205ENST00000555402 ETV2O00321 342 aaPredicted RBP8.97□□□□□ -0.97
VRK1-205ENST00000555402 TRIM37O94972 964 aa8.97□□□□□ -0.97
VRK1-205ENST00000555402 ERCC3P19447 782 aa8.97□□□□□ -0.97
VRK1-205ENST00000555402 CTSWP56202 376 aa8.97□□□□□ -0.97
VRK1-205ENST00000555402 MFSD4AQ8N468 514 aa8.97□□□□□ -0.97
VRK1-205ENST00000555402 ABHD4Q8TB40 342 aa8.97□□□□□ -0.97
VRK1-205ENST00000555402 ALKBH8Q96BT7 664 aaKnown RBP8.97□□□□□ -0.97
VRK1-205ENST00000555402 NECAB3Q96P71 396 aaPredicted RBP8.97□□□□□ -0.97
VRK1-205ENST00000555402 SMG5Q9UPR3 1016 aaKnown RBP8.97□□□□□ -0.97
VRK1-205ENST00000555402 TCAF2A6NFQ2 919 aa8.96□□□□□ -0.98
VRK1-205ENST00000555402 GLDCP23378 1020 aa8.96□□□□□ -0.98
VRK1-205ENST00000555402 MAPK1P28482 360 aa8.96□□□□□ -0.98
VRK1-205ENST00000555402 SFRP5Q5T4F7 317 aa8.96□□□□□ -0.98
VRK1-205ENST00000555402 DNAJC14Q6Y2X3 702 aaPredicted RBP8.96□□□□□ -0.98
VRK1-205ENST00000555402 DMRTB1Q96MA1 342 aa8.96□□□□□ -0.98
VRK1-205ENST00000555402 ALPK1Q96QP1 1244 aa8.96□□□□□ -0.98
VRK1-205ENST00000555402 TPX2Q9ULW0 747 aaKnown RBP8.96□□□□□ -0.98
VRK1-205ENST00000555402 ST14Q9Y5Y6 855 aa8.96□□□□□ -0.98
VRK1-205ENST00000555402 FGD1P98174 961 aa8.95□□□□□ -0.98
VRK1-205ENST00000555402 NXPE4Q6UWF7 544 aa8.95□□□□□ -0.98
VRK1-205ENST00000555402 TTC6Q86TZ1 520 aa8.95□□□□□ -0.98
VRK1-205ENST00000555402 ZNF507Q8TCN5 953 aa8.95□□□□□ -0.98
VRK1-205ENST00000555402 THAP5Q7Z6K1 395 aa8.94□□□□□ -0.98
VRK1-205ENST00000555402 KCNN1Q92952 543 aa8.94□□□□□ -0.98
VRK1-205ENST00000555402 C20orf173Q96LM9 149 aa8.94□□□□□ -0.98
VRK1-205ENST00000555402 PCDHA4Q9UN74 947 aa8.94□□□□□ -0.98
VRK1-205ENST00000555402 CAPN6Q9Y6Q1 641 aa8.94□□□□□ -0.98
VRK1-205ENST00000555402 ANKRD33BA6NCL7 494 aa8.93□□□□□ -0.98
VRK1-205ENST00000555402 E9PSI1 815 aa8.93□□□□□ -0.98
VRK1-205ENST00000555402 HOXA5P20719 270 aa8.93□□□□□ -0.98
VRK1-205ENST00000555402 UBE2FQ969M7 185 aa8.93□□□□□ -0.98
VRK1-205ENST00000555402 SLAMF8Q9P0V8 285 aa8.93□□□□□ -0.98
VRK1-205ENST00000555402 DCTN4Q9UJW0 460 aa8.93□□□□□ -0.98
VRK1-205ENST00000555402 SAMM50Q9Y512 469 aa8.93□□□□□ -0.98
VRK1-205ENST00000555402 ENC1O14682 589 aa8.92□□□□□ -0.98
VRK1-205ENST00000555402 NUAK1O60285 661 aa8.92□□□□□ -0.98
VRK1-205ENST00000555402 PAGE1O75459 146 aa8.92□□□□□ -0.98
VRK1-205ENST00000555402 RAC2P15153 192 aa8.92□□□□□ -0.98
VRK1-205ENST00000555402 C3orf58Q8NDZ4 430 aa8.92□□□□□ -0.98
VRK1-205ENST00000555402 SLC26A8Q96RN1 970 aa8.92□□□□□ -0.98
VRK1-205ENST00000555402 LINC00310P59036 64 aa8.91□□□□□ -0.98
VRK1-205ENST00000555402 TPTE2Q6XPS3 522 aa8.91□□□□□ -0.98
VRK1-205ENST00000555402 ZSCAN29Q8IWY8 852 aaPredicted RBP8.91□□□□□ -0.98
VRK1-205ENST00000555402 RIN3Q8TB24 985 aa8.91□□□□□ -0.98
VRK1-205ENST00000555402 ELMO3Q96BJ8 720 aa8.91□□□□□ -0.98
VRK1-205ENST00000555402 MIPEPQ99797 713 aa8.91□□□□□ -0.98
VRK1-205ENST00000555402 BCL2L13Q9BXK5 485 aa8.91□□□□□ -0.98
VRK1-205ENST00000555402 RBCK1Q9BYM8 510 aa8.91□□□□□ -0.98
VRK1-205ENST00000555402 ERVFC1P60507 584 aa8.9□□□□□ -0.98
VRK1-205ENST00000555402 SLBPQ14493 270 aaKnown RBP eCLIP8.9□□□□□ -0.98
VRK1-205ENST00000555402 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.9□□□□□ -0.98
VRK1-205ENST00000555402 LLGL2Q6P1M3 1020 aa8.9□□□□□ -0.98
VRK1-205ENST00000555402 MFSD2AQ8NA29 543 aa8.9□□□□□ -0.98
VRK1-205ENST00000555402 MYLIPQ8WY64 445 aa8.9□□□□□ -0.98
VRK1-205ENST00000555402 FBRSQ9HAH7 460 aa8.9□□□□□ -0.98
VRK1-205ENST00000555402 ZSWIM5Q9P217 1185 aa8.9□□□□□ -0.98
VRK1-205ENST00000555402 DNAJC25-GNG10A0A024R161 153 aa8.89□□□□□ -0.99
VRK1-205ENST00000555402 CBX7O95931 251 aa8.89□□□□□ -0.99
VRK1-205ENST00000555402 LRRC14Q15048 493 aa8.89□□□□□ -0.99
VRK1-205ENST00000555402 RALGPS1Q5JS13 557 aa8.89□□□□□ -0.99
VRK1-205ENST00000555402 RASIP1Q5U651 963 aa8.89□□□□□ -0.99
VRK1-205ENST00000555402 SCARA3Q6AZY7 606 aa8.89□□□□□ -0.99
VRK1-205ENST00000555402 CEP44Q9C0F1 390 aa8.89□□□□□ -0.99
VRK1-205ENST00000555402 RBM47A0AV96 593 aaKnown RBP8.88□□□□□ -0.99
VRK1-205ENST00000555402 INPP5AQ14642 412 aa8.88□□□□□ -0.99
VRK1-205ENST00000555402 RELTQ969Z4 430 aa8.88□□□□□ -0.99
VRK1-205ENST00000555402 ASB16Q96NS5 453 aa8.88□□□□□ -0.99
VRK1-205ENST00000555402 IRF2BPLQ9H1B7 796 aa8.88□□□□□ -0.99
VRK1-205ENST00000555402 PRAMEF27A3QJZ7 478 aa8.87□□□□□ -0.99
VRK1-205ENST00000555402 SRFP11831 508 aa8.87□□□□□ -0.99
VRK1-205ENST00000555402 CAP2P40123 477 aa8.87□□□□□ -0.99
VRK1-205ENST00000555402 NKG7Q16617 165 aa8.87□□□□□ -0.99
VRK1-205ENST00000555402 GIPC2Q8TF65 315 aa8.87□□□□□ -0.99
VRK1-205ENST00000555402 TMEM59LQ9UK28 342 aa8.87□□□□□ -0.99
VRK1-205ENST00000555402 RBAK-RBAKDNI3L0D1 243 aa8.86□□□□□ -0.99
VRK1-205ENST00000555402 HPXP02790 462 aa8.86□□□□□ -0.99
VRK1-205ENST00000555402 HK2P52789 917 aa8.86□□□□□ -0.99
VRK1-205ENST00000555402 ZNF746Q6NUN9 644 aaPredicted RBP8.86□□□□□ -0.99
VRK1-205ENST00000555402 LETMD1Q6P1Q0 360 aa8.86□□□□□ -0.99
VRK1-205ENST00000555402 LRFN4Q6PJG9 635 aa8.86□□□□□ -0.99
VRK1-205ENST00000555402 PARD6AQ9NPB6 346 aa8.86□□□□□ -0.99
VRK1-205ENST00000555402 CYP8B1Q9UNU6 501 aa8.86□□□□□ -0.99
VRK1-205ENST00000555402 JAG2Q9Y219 1238 aa8.86□□□□□ -0.99
VRK1-205ENST00000555402 ESR1P03372 595 aa8.85□□□□□ -0.99
VRK1-205ENST00000555402 GSTT1P30711 240 aa8.85□□□□□ -0.99
VRK1-205ENST00000555402 TNK2Q07912 1038 aa8.85□□□□□ -0.99
VRK1-205ENST00000555402 ZNF326Q5BKZ1 582 aaKnown RBP8.85□□□□□ -0.99
VRK1-205ENST00000555402 TMPRSS7Q7RTY8 843 aa8.85□□□□□ -0.99
VRK1-205ENST00000555402 KRTAP17-1Q9BYP8 105 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms