RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 GABPAQ06546 454 aa24.52■■□□□ 1.52
FOXN3-209ENST00000555353 TATDN1Q6P1N9 297 aa24.52■■□□□ 1.52
FOXN3-209ENST00000555353 IFNL1Q8IU54 200 aa24.52■■□□□ 1.52
FOXN3-209ENST00000555353 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.52■■□□□ 1.52
FOXN3-209ENST00000555353 TAOK2Q9UL54 1235 aa24.52■■□□□ 1.52
FOXN3-209ENST00000555353 CYP2D7A0A087X1C5 515 aa24.51■■□□□ 1.51
FOXN3-209ENST00000555353 TESPA1A2RU30 521 aaPredicted RBP24.51■■□□□ 1.51
FOXN3-209ENST00000555353 ALDH1A1P00352 501 aa24.51■■□□□ 1.51
FOXN3-209ENST00000555353 EVX2Q03828 476 aa24.51■■□□□ 1.51
FOXN3-209ENST00000555353 CERKLQ49MI3 558 aaPredicted RBP24.51■■□□□ 1.51
FOXN3-209ENST00000555353 GINM1Q9NU53 330 aa24.51■■□□□ 1.51
FOXN3-209ENST00000555353 SWAP70Q9UH65 585 aa24.51■■□□□ 1.51
FOXN3-209ENST00000555353 TSKSQ9UJT2 592 aa24.51■■□□□ 1.51
FOXN3-209ENST00000555353 KCNH4Q9UQ05 1017 aa24.51■■□□□ 1.51
FOXN3-209ENST00000555353 SHMT1P34896 483 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 IFNL3Q8IZI9 196 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 BRI3BPQ8WY22 251 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 TBC1D2Q9BYX2 928 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 EPB41L4AQ9HCS5 686 aaPredicted RBP24.5■■□□□ 1.51
FOXN3-209ENST00000555353 USP17L5A8MUK1 530 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 CXCL11O14625 94 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 SBK1Q52WX2 424 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 CWC27Q6UX04 472 aaKnown RBP24.5■■□□□ 1.51
FOXN3-209ENST00000555353 CCDC84Q86UT8 332 aaPredicted RBP24.5■■□□□ 1.51
FOXN3-209ENST00000555353 DYNLL2Q96FJ2 89 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 NAPBQ9H115 298 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 ZBTB21Q9ULJ3 1066 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 AFG3L2Q9Y4W6 797 aa24.5■■□□□ 1.51
FOXN3-209ENST00000555353 MINDY4BA8MYZ0 360 aa24.49■■□□□ 1.51
FOXN3-209ENST00000555353 IGF2BP3O00425 579 aaKnown RBP eCLIP24.49■■□□□ 1.51
FOXN3-209ENST00000555353 MFAP1P55081 439 aaKnown RBP24.49■■□□□ 1.51
FOXN3-209ENST00000555353 AS3MTQ9HBK9 375 aa24.49■■□□□ 1.51
FOXN3-209ENST00000555353 PTPRFP10586 1907 aa24.49■■□□□ 1.51
FOXN3-209ENST00000555353 TRIM75PA6NK02 468 aa24.48■■□□□ 1.51
FOXN3-209ENST00000555353 GH2P01242 217 aa24.48■■□□□ 1.51
FOXN3-209ENST00000555353 HSPA8P11142 646 aaKnown RBP24.48■■□□□ 1.51
FOXN3-209ENST00000555353 ABCB5Q2M3G0 1257 aa24.48■■□□□ 1.51
FOXN3-209ENST00000555353 SLC44A5Q8NCS7 719 aa24.48■■□□□ 1.51
FOXN3-209ENST00000555353 PTPN18Q99952 460 aa24.48■■□□□ 1.51
FOXN3-209ENST00000555353 CABP5Q9NP86 173 aa24.48■■□□□ 1.51
FOXN3-209ENST00000555353 CCDC171Q6TFL3 1326 aa24.48■■□□□ 1.51
FOXN3-209ENST00000555353 LBX1P52954 281 aa24.47■■□□□ 1.51
FOXN3-209ENST00000555353 JAG1P78504 1218 aa24.47■■□□□ 1.51
FOXN3-209ENST00000555353 C16orf86Q6ZW13 317 aa24.47■■□□□ 1.51
FOXN3-209ENST00000555353 ZNF280CQ8ND82 737 aa24.47■■□□□ 1.51
FOXN3-209ENST00000555353 CDK8P49336 464 aa24.46■■□□□ 1.51
FOXN3-209ENST00000555353 SPP2Q13103 211 aa24.46■■□□□ 1.51
FOXN3-209ENST00000555353 SHROOM1Q2M3G4 852 aaPredicted RBP24.46■■□□□ 1.51
FOXN3-209ENST00000555353 ZNF589Q86UQ0 364 aaPredicted RBP24.46■■□□□ 1.51
FOXN3-209ENST00000555353 SMIM22K7EJ46 135 aa24.46■■□□□ 1.51
FOXN3-209ENST00000555353 MPHOSPH10O00566 681 aaKnown RBP24.46■■□□□ 1.51
FOXN3-209ENST00000555353 VPS53Q5VIR6 699 aa24.46■■□□□ 1.51
FOXN3-209ENST00000555353 A0A0G2JLL6 359 aaPredicted RBP24.45■■□□□ 1.5
FOXN3-209ENST00000555353 RAB3GAP1Q15042 981 aa24.45■■□□□ 1.5
FOXN3-209ENST00000555353 FASTKD5Q7L8L6 764 aaKnown RBP24.45■■□□□ 1.5
FOXN3-209ENST00000555353 PRRT2Q7Z6L0 340 aaPredicted RBP24.45■■□□□ 1.5
FOXN3-209ENST00000555353 BTBD19C9JJ37 291 aa24.44■■□□□ 1.5
FOXN3-209ENST00000555353 TBC1D8O95759 1140 aa24.44■■□□□ 1.5
FOXN3-209ENST00000555353 STK11IPQ8N1F8 1099 aa24.44■■□□□ 1.5
FOXN3-209ENST00000555353 FAM43AQ8N2R8 423 aa24.44■■□□□ 1.5
FOXN3-209ENST00000555353 WDR18Q9BV38 432 aa24.44■■□□□ 1.5
FOXN3-209ENST00000555353 ROBO3Q96MS0 1386 aa24.43■■□□□ 1.5
FOXN3-209ENST00000555353 FOXP2O15409 715 aa24.43■■□□□ 1.5
FOXN3-209ENST00000555353 SLC3A2P08195 630 aaKnown RBP24.43■■□□□ 1.5
FOXN3-209ENST00000555353 HSPD1P10809 573 aaKnown RBP24.43■■□□□ 1.5
FOXN3-209ENST00000555353 GADL1Q6ZQY3 521 aa24.43■■□□□ 1.5
FOXN3-209ENST00000555353 CCDC17Q96LX7 622 aa24.43■■□□□ 1.5
FOXN3-209ENST00000555353 ZNF287Q9HBT7 754 aa24.43■■□□□ 1.5
FOXN3-209ENST00000555353 ZCCHC17Q9NP64 241 aaKnown RBP24.43■■□□□ 1.5
FOXN3-209ENST00000555353 CASC1Q6TDU7 716 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 MKNK2Q9HBH9 465 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 PRDM10Q9NQV6 1147 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 CASP8AP2Q9UKL3 1982 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 PPARAQ07869 468 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 TAF1CQ15572 869 aaPredicted RBP24.42■■□□□ 1.5
FOXN3-209ENST00000555353 ALX1Q15699 326 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 TMEM179Q6ZVK1 233 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 ANKRD23Q86SG2 305 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 RUFY2Q8WXA3 655 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 CFHR5Q9BXR6 569 aa24.42■■□□□ 1.5
FOXN3-209ENST00000555353 CDC45O75419 566 aa24.41■■□□□ 1.5
FOXN3-209ENST00000555353 HMGCS2P54868 508 aa24.41■■□□□ 1.5
FOXN3-209ENST00000555353 CRHR2Q13324 411 aa24.41■■□□□ 1.5
FOXN3-209ENST00000555353 MTMR2Q13614 643 aa24.41■■□□□ 1.5
FOXN3-209ENST00000555353 MOGSQ13724 837 aa24.41■■□□□ 1.5
FOXN3-209ENST00000555353 USP17L10C9JJH3 530 aa24.4■■□□□ 1.5
FOXN3-209ENST00000555353 PDHXO00330 501 aa24.4■■□□□ 1.5
FOXN3-209ENST00000555353 AKR1B1P15121 316 aa24.4■■□□□ 1.5
FOXN3-209ENST00000555353 CHMLP26374 656 aa24.4■■□□□ 1.5
FOXN3-209ENST00000555353 BACE1P56817 501 aa24.4■■□□□ 1.5
FOXN3-209ENST00000555353 PDE4BQ07343 736 aa24.4■■□□□ 1.5
FOXN3-209ENST00000555353 SEPT2Q15019 361 aa24.4■■□□□ 1.5
FOXN3-209ENST00000555353 FEZ1Q99689 392 aa24.4■■□□□ 1.5
FOXN3-209ENST00000555353 ZFYVE28Q9HCC9 887 aa24.4■■□□□ 1.5
FOXN3-209ENST00000555353 C19orf81C9J6K1 198 aa24.39■■□□□ 1.5
FOXN3-209ENST00000555353 FGAP02671 866 aa24.39■■□□□ 1.5
FOXN3-209ENST00000555353 PROCA1Q8NCQ7 364 aaPredicted RBP24.39■■□□□ 1.5
FOXN3-209ENST00000555353 RAD50Q92878 1312 aa24.39■■□□□ 1.49
FOXN3-209ENST00000555353 GUCY1A2P33402 732 aa24.38■■□□□ 1.49
FOXN3-209ENST00000555353 TMOD4Q9NZQ9 345 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms