RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 NBPF11Q86T75 865 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 JMYQ8N9B5 988 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 USP28Q96RU2 1077 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 DLEC1Q9Y238 1755 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 BAZ2AQ9UIF9 1905 aaKnown RBP16.82■□□□□ 0.28
IFT43-209ENST00000555305 FLT1P17948 1338 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 PRPF3O43395 683 aaKnown RBP16.82■□□□□ 0.28
IFT43-209ENST00000555305 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 GNAQP50148 359 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 C16orf86Q6ZW13 317 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 ILDR1Q86SU0 546 aaPredicted RBP16.82■□□□□ 0.28
IFT43-209ENST00000555305 CCDC125Q86Z20 511 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 TEKT1Q969V4 418 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 NUP62CLQ9H1M0 184 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 FOXP1Q9H334 677 aaPredicted RBP16.82■□□□□ 0.28
IFT43-209ENST00000555305 KAT14Q9H8E8 782 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 DAGLAQ9Y4D2 1042 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 MYH2Q9UKX2 1941 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 A0A1W2PQ27 194 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 A0A1W2PQ64 194 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 A0A1W2PQD8 194 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 CTAGE5O15320 804 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 CYP2D6P10635 497 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 TFAP4Q01664 338 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 SF3A1Q15459 793 aaKnown RBP16.81■□□□□ 0.28
IFT43-209ENST00000555305 CCDC73Q6ZRK6 1079 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 MAPKAPK5Q8IW41 473 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 TTF2Q9UNY4 1162 aaKnown RBP16.81■□□□□ 0.28
IFT43-209ENST00000555305 NAV1Q8NEY1 1877 aa16.81■□□□□ 0.28
IFT43-209ENST00000555305 MMP1P03956 469 aa16.8■□□□□ 0.28
IFT43-209ENST00000555305 ME1P48163 572 aa16.8■□□□□ 0.28
IFT43-209ENST00000555305 CCDC173Q0VFZ6 552 aa16.8■□□□□ 0.28
IFT43-209ENST00000555305 STK38Q15208 465 aa16.8■□□□□ 0.28
IFT43-209ENST00000555305 MAP3K11Q16584 847 aa16.8■□□□□ 0.28
IFT43-209ENST00000555305 ADALQ6DHV7 355 aa16.8■□□□□ 0.28
IFT43-209ENST00000555305 FAM177A1Q8N128 213 aaPredicted RBP16.8■□□□□ 0.28
IFT43-209ENST00000555305 FBXW7Q969H0 707 aa16.8■□□□□ 0.28
IFT43-209ENST00000555305 MYH15Q9Y2K3 1946 aa16.8■□□□□ 0.28
IFT43-209ENST00000555305 PPFIA3O75145 1194 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 CCDC192P0DO97 292 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 UVSSAQ2YD98 709 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 PPP4R3BQ5MIZ7 849 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 TMTC3Q6ZXV5 915 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 LINC00301Q8NCQ3 95 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 PGBD1Q96JS3 809 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 BRMS1Q9HCU9 246 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 C10orf71Q711Q0 1435 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 MYO3BQ8WXR4 1341 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 RILPL1Q5EBL4 403 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 FAM47AQ5JRC9 791 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 ANO1Q5XXA6 986 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 OTUD7BQ6GQQ9 843 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 NOSTRINQ8IVI9 506 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 VPS33BQ9H267 617 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 TNMDQ9H2S6 317 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 SWAP70Q9UH65 585 aa16.79■□□□□ 0.28
IFT43-209ENST00000555305 SPTLC2O15270 562 aa16.78■□□□□ 0.28
IFT43-209ENST00000555305 PPP6R2O75170 966 aa16.78■□□□□ 0.28
IFT43-209ENST00000555305 CAVIN2O95810 425 aa16.78■□□□□ 0.28
IFT43-209ENST00000555305 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
IFT43-209ENST00000555305 DOK7Q18PE1 504 aa16.78■□□□□ 0.28
IFT43-209ENST00000555305 RTKN2Q8IZC4 609 aa16.78■□□□□ 0.28
IFT43-209ENST00000555305 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.78■□□□□ 0.28
IFT43-209ENST00000555305 CLSTN2Q9H4D0 955 aa16.78■□□□□ 0.28
IFT43-209ENST00000555305 DACT1Q9NYF0 836 aa16.78■□□□□ 0.28
IFT43-209ENST00000555305 USP17L3A6NCW0 530 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 USP17L4A6NCW7 530 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 SMIM22K7EJ46 135 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 CDK8P49336 464 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 CEBPZQ03701 1054 aaKnown RBP16.77■□□□□ 0.28
IFT43-209ENST00000555305 FAM160A1Q05DH4 1040 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 FUT2Q10981 343 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 SOGA3Q5TF21 947 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 RBM43Q6ZSC3 357 aaKnown RBP16.77■□□□□ 0.28
IFT43-209ENST00000555305 USP17L1Q7RTZ2 530 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 NEDD1Q8NHV4 660 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 ZDHHC15Q96MV8 337 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 RBSNQ9H1K0 784 aa16.77■□□□□ 0.28
IFT43-209ENST00000555305 DDX60LQ5H9U9 1706 aaKnown RBP16.77■□□□□ 0.28
IFT43-209ENST00000555305 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.27
IFT43-209ENST00000555305 LIG1P18858 919 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 RASA1P20936 1047 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 PLCD1P51178 756 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 SLC39A14Q15043 492 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 RCSD1Q6JBY9 416 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 CCAR1Q8IX12 1150 aaKnown RBP16.77■□□□□ 0.27
IFT43-209ENST00000555305 CERS5Q8N5B7 392 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 TTLL6Q8N841 843 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 PNMA1Q8ND90 353 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 MRPS27Q92552 414 aaKnown RBP16.77■□□□□ 0.27
IFT43-209ENST00000555305 AIFM3Q96NN9 605 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 SAP30BPQ9UHR5 308 aaKnown RBP16.77■□□□□ 0.27
IFT43-209ENST00000555305 CEP131Q9UPN4 1083 aa16.77■□□□□ 0.27
IFT43-209ENST00000555305 PLIN4Q96Q06 1357 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 KIF28PB7ZC32 967 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 ECE2O60344 883 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms