RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 ASNSP08243 561 aa16.12■□□□□ 0.17
XRCC3-212ENST00000555231 HOXA7P31268 230 aaPredicted RBP16.12■□□□□ 0.17
XRCC3-212ENST00000555231 BMP8BP34820 402 aa16.12■□□□□ 0.17
XRCC3-212ENST00000555231 HERVK_113P62684 666 aa16.12■□□□□ 0.17
XRCC3-212ENST00000555231 Q3C1V9 767 aa16.12■□□□□ 0.17
XRCC3-212ENST00000555231 TTC39AQ5SRH9 613 aa16.12■□□□□ 0.17
XRCC3-212ENST00000555231 CRACR2BQ8N4Y2 399 aaPredicted RBP16.12■□□□□ 0.17
XRCC3-212ENST00000555231 ARHGAP45Q92619 1136 aa16.12■□□□□ 0.17
XRCC3-212ENST00000555231 NUDT12Q9BQG2 462 aa16.12■□□□□ 0.17
XRCC3-212ENST00000555231 DHX36Q9H2U1 1008 aaKnown RBP16.12■□□□□ 0.17
XRCC3-212ENST00000555231 SAP30BPQ9UHR5 308 aaKnown RBP16.12■□□□□ 0.17
XRCC3-212ENST00000555231 PALD1Q9ULE6 856 aa16.12■□□□□ 0.17
XRCC3-212ENST00000555231 MAGEA10P43363 369 aaPredicted RBP16.11■□□□□ 0.17
XRCC3-212ENST00000555231 MAP3K21Q5TCX8 1036 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 Q7L0L9 218 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 GPRC5AQ8NFJ5 357 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 DBNDD2Q9BQY9 259 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 PAGR1Q9BTK6 254 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 TRIM34Q9BYJ4 488 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 PORCNQ9H237 461 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 RBPJLQ9UBG7 517 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 LAMA3Q16787 3333 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 PFASO15067 1338 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 FLT1P17948 1338 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 MYH1P12882 1939 aa16.11■□□□□ 0.17
XRCC3-212ENST00000555231 C19orf81C9J6K1 198 aa16.1■□□□□ 0.17
XRCC3-212ENST00000555231 USP17L10C9JJH3 530 aa16.1■□□□□ 0.17
XRCC3-212ENST00000555231 TRIM27P14373 513 aa16.1■□□□□ 0.17
XRCC3-212ENST00000555231 PPP4CP60510 307 aa16.1■□□□□ 0.17
XRCC3-212ENST00000555231 DYNLL1P63167 89 aaKnown RBP16.1■□□□□ 0.17
XRCC3-212ENST00000555231 CACNB2Q08289 660 aaPredicted RBP16.1■□□□□ 0.17
XRCC3-212ENST00000555231 CCL14Q16627 93 aa16.1■□□□□ 0.17
XRCC3-212ENST00000555231 FOXP4Q8IVH2 680 aaPredicted RBP16.1■□□□□ 0.17
XRCC3-212ENST00000555231 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
XRCC3-212ENST00000555231 CLUAP1Q96AJ1 413 aa16.1■□□□□ 0.17
XRCC3-212ENST00000555231 ZBTB21Q9ULJ3 1066 aa16.1■□□□□ 0.17
XRCC3-212ENST00000555231 FRMPD3Q5JV73 1810 aa16.1■□□□□ 0.17
XRCC3-212ENST00000555231 CYP2E1P05181 493 aaPredicted RBP16.09■□□□□ 0.17
XRCC3-212ENST00000555231 PLCG2P16885 1265 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
XRCC3-212ENST00000555231 CCND3P30281 292 aaPredicted RBP16.09■□□□□ 0.17
XRCC3-212ENST00000555231 ERVK-9P63128 1117 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 ERVK-24P63145 666 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 PDE3AQ14432 1141 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 TNNI3KQ59H18 835 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 POTEEQ6S8J3 1075 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
XRCC3-212ENST00000555231 DEFB123Q8N688 67 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 SOCS4Q8WXH5 440 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 EMILIN3Q9NT22 766 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 FPGT-TNNI3KV9GXZ4 949 aa16.09■□□□□ 0.17
XRCC3-212ENST00000555231 BCAR3O75815 825 aa16.08■□□□□ 0.16
XRCC3-212ENST00000555231 XRCC5P13010 732 aaKnown RBP16.08■□□□□ 0.16
XRCC3-212ENST00000555231 MAPK4P31152 587 aa16.08■□□□□ 0.16
XRCC3-212ENST00000555231 ZAP70P43403 619 aa16.08■□□□□ 0.16
XRCC3-212ENST00000555231 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
XRCC3-212ENST00000555231 ZYXQ15942 572 aaKnown RBP16.08■□□□□ 0.16
XRCC3-212ENST00000555231 CCDC158Q5M9N0 1113 aa16.08■□□□□ 0.16
XRCC3-212ENST00000555231 GPR142Q7Z601 462 aa16.08■□□□□ 0.16
XRCC3-212ENST00000555231 METTL16Q86W50 562 aaKnown RBP16.08■□□□□ 0.16
XRCC3-212ENST00000555231 TDHQ8IZJ6 230 aa16.08■□□□□ 0.16
XRCC3-212ENST00000555231 USP6NLQ92738 828 aa16.08■□□□□ 0.16
XRCC3-212ENST00000555231 UBE2OQ9C0C9 1292 aaKnown RBP16.08■□□□□ 0.16
XRCC3-212ENST00000555231 PIH1D3Q9NQM4 214 aaKnown RBP16.08■□□□□ 0.16
XRCC3-212ENST00000555231 RGS2P41220 211 aa16.07■□□□□ 0.16
XRCC3-212ENST00000555231 MORN1Q5T089 497 aa16.07■□□□□ 0.16
XRCC3-212ENST00000555231 ATF7IPQ6VMQ6 1270 aa16.07■□□□□ 0.16
XRCC3-212ENST00000555231 PLEKHH3Q7Z736 793 aa16.07■□□□□ 0.16
XRCC3-212ENST00000555231 CWC22Q9HCG8 908 aaKnown RBP16.07■□□□□ 0.16
XRCC3-212ENST00000555231 NDUFB9Q9Y6M9 179 aa16.07■□□□□ 0.16
XRCC3-212ENST00000555231 COL6A3P12111 3177 aa16.07■□□□□ 0.16
XRCC3-212ENST00000555231 IPO8O15397 1037 aaKnown RBP16.06■□□□□ 0.16
XRCC3-212ENST00000555231 GH2P01242 217 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 HLA-DOAP06340 250 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 COL6A1P12109 1028 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 CYP7A1P22680 504 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 LRRC26Q2I0M4 334 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 LRIT3Q3SXY7 679 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 LHX8Q68G74 356 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 USP17L2Q6R6M4 530 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 TRMT44Q8IYL2 757 aaKnown RBP16.06■□□□□ 0.16
XRCC3-212ENST00000555231 GPR108Q9NPR9 543 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
XRCC3-212ENST00000555231 CNMDO75829 334 aa16.05■□□□□ 0.16
XRCC3-212ENST00000555231 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
XRCC3-212ENST00000555231 POLA2Q14181 598 aa16.05■□□□□ 0.16
XRCC3-212ENST00000555231 WDR78Q5VTH9 848 aa16.05■□□□□ 0.16
XRCC3-212ENST00000555231 GPR153Q6NV75 609 aa16.05■□□□□ 0.16
XRCC3-212ENST00000555231 TMEM57Q8N5G2 664 aa16.05■□□□□ 0.16
XRCC3-212ENST00000555231 MIGA1Q8NAN2 632 aa16.05■□□□□ 0.16
XRCC3-212ENST00000555231 APBA2Q99767 749 aa16.05■□□□□ 0.16
XRCC3-212ENST00000555231 C1orf115Q9H7X2 142 aa16.05■□□□□ 0.16
XRCC3-212ENST00000555231 TLR7Q9NYK1 1049 aaKnown RBP16.05■□□□□ 0.16
XRCC3-212ENST00000555231 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
XRCC3-212ENST00000555231 MAP2K5Q13163 448 aa16.04■□□□□ 0.16
XRCC3-212ENST00000555231 GTF3C2Q8WUA4 911 aaPredicted RBP16.04■□□□□ 0.16
XRCC3-212ENST00000555231 FEZ1Q99689 392 aa16.04■□□□□ 0.16
XRCC3-212ENST00000555231 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
XRCC3-212ENST00000555231 MTMR10Q9NXD2 777 aa16.04■□□□□ 0.16
XRCC3-212ENST00000555231 FLRT1Q9NZU1 646 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms