RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 GPC2Q8N158 579 aa6.54□□□□□ -1.36
ATXN3-229ENST00000554672 ZNF417Q8TAU3 575 aa6.54□□□□□ -1.36
ATXN3-229ENST00000554672 CAPNS2Q96L46 248 aa6.54□□□□□ -1.36
ATXN3-229ENST00000554672 ZNF587Q96SQ5 575 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-229ENST00000554672 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-229ENST00000554672 DMGDHQ9UI17 866 aaKnown RBP6.54□□□□□ -1.36
ATXN3-229ENST00000554672 RBM19Q9Y4C8 960 aaKnown RBP6.54□□□□□ -1.36
ATXN3-229ENST00000554672 BRCA1P38398 1863 aaKnown RBP6.53□□□□□ -1.36
ATXN3-229ENST00000554672 KLRG2A4D1S0 409 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-229ENST00000554672 CA12O43570 354 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 NPR1P16066 1061 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 GRNP28799 593 aaKnown RBP6.53□□□□□ -1.36
ATXN3-229ENST00000554672 LMOD1P29536 600 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-229ENST00000554672 ALDH1B1P30837 517 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 ADH7P40394 386 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 C20orf204Q6ZNR8 217 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 MORC1Q86VD1 984 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 SYNE4Q8N205 404 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 JDP2Q8WYK2 163 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 HINFPQ9BQA5 517 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 PRDM6Q9NQX0 595 aa6.53□□□□□ -1.36
ATXN3-229ENST00000554672 ZNF541Q9H0D2 1346 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 FAM196BA6NMK8 535 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L15C9J2P7 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L10C9JJH3 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L13C9JLJ4 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L12C9JPN9 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L11C9JVI0 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L21D6R901 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L18D6R9N7 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L22D6RA61 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L17D6RBQ6 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L19D6RCP7 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L20D6RJB6 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 CAMTA2O94983 1202 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 ITGB7P26010 798 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 IARSP41252 1262 aaKnown RBP6.52□□□□□ -1.37
ATXN3-229ENST00000554672 EIF6P56537 245 aaKnown RBP6.52□□□□□ -1.37
ATXN3-229ENST00000554672 USP17L24Q0WX57 530 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 GRM1Q13255 1194 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 CLEC4GQ6UXB4 293 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 TPTE2Q6XPS3 522 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 NBPF5PQ86XG9 351 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-229ENST00000554672 ANKMY2Q8IV38 441 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 PANK3Q9H999 370 aa6.52□□□□□ -1.37
ATXN3-229ENST00000554672 RNF123Q5XPI4 1314 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 SBF1O95248 1867 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 MYH14Q7Z406 1995 aaKnown RBP6.51□□□□□ -1.37
ATXN3-229ENST00000554672 A1BGP04217 495 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 SPATA31C1P0DKV0 1188 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 NID1P14543 1247 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 IGFBP4P22692 258 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 DGKZQ13574 1117 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 RTN1Q16799 776 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 MTHFSDQ2M296 383 aaKnown RBP6.51□□□□□ -1.37
ATXN3-229ENST00000554672 CST9Q5W186 159 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 ZNF790Q6PG37 636 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 USP50Q70EL3 339 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-229ENST00000554672 BHMTQ93088 406 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 ZNF496Q96IT1 587 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-229ENST00000554672 GSX2Q9BZM3 304 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 VRTNQ9H8Y1 702 aa6.51□□□□□ -1.37
ATXN3-229ENST00000554672 FAM229AH3BQW9 127 aa6.5□□□□□ -1.37
ATXN3-229ENST00000554672 AOC2O75106 756 aa6.5□□□□□ -1.37
ATXN3-229ENST00000554672 DOC2BQ14184 412 aa6.5□□□□□ -1.37
ATXN3-229ENST00000554672 IER5Q5VY09 327 aa6.5□□□□□ -1.37
ATXN3-229ENST00000554672 HHIPL1Q96JK4 782 aa6.5□□□□□ -1.37
ATXN3-229ENST00000554672 FMNL2Q96PY5 1086 aa6.5□□□□□ -1.37
ATXN3-229ENST00000554672 PSMD1Q99460 953 aa6.5□□□□□ -1.37
ATXN3-229ENST00000554672 ZNF652Q9Y2D9 606 aa6.5□□□□□ -1.37
ATXN3-229ENST00000554672 COL5A3P25940 1745 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-229ENST00000554672 HEG1Q9ULI3 1381 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 TGFBR3LH3BV60 316 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 TRAF5O00463 557 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 HMOX1P09601 288 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 WEE1P30291 646 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 EPS15P42566 896 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.37
ATXN3-229ENST00000554672 TEFQ10587 303 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 OLFM4Q6UX06 510 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 SAPCD2Q86UD0 394 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 KLK14Q9P0G3 267 aa6.49□□□□□ -1.37
ATXN3-229ENST00000554672 GNAT3A8MTJ3 354 aa6.48□□□□□ -1.37
ATXN3-229ENST00000554672 CELF2O95319 508 aaKnown RBP6.48□□□□□ -1.37
ATXN3-229ENST00000554672 GATA4P43694 442 aa6.48□□□□□ -1.37
ATXN3-229ENST00000554672 XP32Q5T750 250 aa6.48□□□□□ -1.37
ATXN3-229ENST00000554672 IL17REQ8NFR9 667 aa6.48□□□□□ -1.37
ATXN3-229ENST00000554672 ADARB2Q9NS39 739 aaKnown RBP6.48□□□□□ -1.37
ATXN3-229ENST00000554672 SLC6A14Q9UN76 642 aa6.48□□□□□ -1.37
ATXN3-229ENST00000554672 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-229ENST00000554672 KNSTRNQ9Y448 316 aa6.48□□□□□ -1.37
ATXN3-229ENST00000554672 ADAMTS7Q9UKP4 1686 aa6.48□□□□□ -1.37
ATXN3-229ENST00000554672 NRXN2Q9P2S2 1712 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 DIAPH1O60610 1272 aaKnown RBP6.47□□□□□ -1.37
ATXN3-229ENST00000554672 INPP5BP32019 993 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 NOGQ13253 232 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 GRIK4Q16099 956 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms