RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 DLC1Q96QB1 1528 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 NPC1L1Q9UHC9 1359 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 NME2P22392 152 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 RAB33AQ14088 237 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 TMEM132EQ6IEE7 984 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 KANK3Q6NY19 840 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 FOXR1Q6PIV2 292 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 CCDC84Q86UT8 332 aaPredicted RBP6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 SULF2Q8IWU5 870 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 FAM169BQ8N8A8 192 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 GRIN3AQ8TCU5 1115 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 TNFRSF25Q93038 417 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 MRFAP1L1Q96HT8 127 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 LACRTQ9GZZ8 138 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 SMG9Q9H0W8 520 aaKnown RBP6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 PRKAG3Q9UGI9 489 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 MRPL42Q9Y6G3 142 aaKnown RBP6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 TULP4Q9NRJ4 1543 aa6.24□□□□□ -1.41
PPP4R3A-204ENST00000554574 YTHDC2Q9H6S0 1430 aaKnown RBP6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 SETD1BQ9UPS6 1966 aaKnown RBP6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 ROBO2Q9HCK4 1378 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 PTPRAP18433 802 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 LMNB1P20700 586 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 GAL3ST3Q96A11 431 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 LPIN3Q9BQK8 851 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 TRIM55Q9BYV6 548 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 ADAM19Q9H013 955 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 SH2B1Q9NRF2 756 aaPredicted RBP6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 SIRPGQ9P1W8 387 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 SMAD7O15105 426 aaKnown RBP6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 CILPO75339 1184 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 ADH7P40394 386 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 HNRNPUQ00839 825 aaKnown RBP eCLIP6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 MPP2Q14168 576 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 EGFLAMQ63HQ2 1017 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 MICALL1Q8N3F8 863 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 MKL1Q969V6 931 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 SAMM50Q9Y512 469 aa6.23□□□□□ -1.41
PPP4R3A-204ENST00000554574 LRPPRCP42704 1394 aaKnown RBP6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 PPM1GO15355 546 aaPredicted RBP6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 ESRRAP11474 423 aaPredicted RBP6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 MCM4P33991 863 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 PTPN11Q06124 597 aaPredicted RBP6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 LAPTM4AQ15012 233 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 TCEAL1Q15170 157 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 CWF19L2Q2TBE0 894 aaKnown RBP6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 LLGL2Q6P1M3 1020 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 ELMSAN1Q6PJG2 1045 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 SV2AQ7L0J3 742 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 REC114Q7Z4M0 266 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 FAM9BQ8IZU0 186 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 PNISRQ8TF01 805 aaKnown RBP6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 SRPK1Q96SB4 655 aaKnown RBP6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 MDFIQ99750 246 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 CBX8Q9HC52 389 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 BRMS1Q9HCU9 246 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 CYP8B1Q9UNU6 501 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 KNSTRNQ9Y448 316 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 ANKRD26Q9UPS8 1709 aa6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 RIMS1Q86UR5 1692 aaKnown RBP6.22□□□□□ -1.41
PPP4R3A-204ENST00000554574 ZBED9Q6R2W3 1325 aa6.21□□□□□ -1.41
PPP4R3A-204ENST00000554574 EVC2Q86UK5 1308 aa6.21□□□□□ -1.41
PPP4R3A-204ENST00000554574 EPHA1P21709 976 aa6.21□□□□□ -1.41
PPP4R3A-204ENST00000554574 ARNTP27540 789 aa6.21□□□□□ -1.41
PPP4R3A-204ENST00000554574 RASA3Q14644 834 aa6.21□□□□□ -1.41
PPP4R3A-204ENST00000554574 MPRIPQ6WCQ1 1025 aa6.21□□□□□ -1.41
PPP4R3A-204ENST00000554574 FERD3LQ96RJ6 166 aa6.21□□□□□ -1.41
PPP4R3A-204ENST00000554574 AVENQ9NQS1 362 aaPredicted RBP6.21□□□□□ -1.41
PPP4R3A-204ENST00000554574 SNTG2Q9NY99 539 aa6.21□□□□□ -1.41
PPP4R3A-204ENST00000554574 TMEM2Q9UHN6 1383 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 NINLQ9Y2I6 1382 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 SLIT1O75093 1534 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 ZNF142P52746 1687 aaPredicted RBP6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 ADAMTSL3P82987 1691 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 FAM221BA6H8Z2 402 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 NCLP19338 710 aaKnown RBP6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 GIPRP48546 466 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 EIF6P56537 245 aaKnown RBP6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 CLCQ05315 142 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 ZNF252P-AS1Q0IIN9 211 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 GAS6Q14393 721 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 FBXW10Q5XX13 1052 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 GDF6Q6KF10 455 aaPredicted RBP6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 GK5Q6ZS86 529 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 PDZD3Q86UT5 571 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 CELF2-AS1Q8N7Q2 184 aa6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 NANOS1Q8WY41 292 aaKnown RBP6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.21□□□□□ -1.42
PPP4R3A-204ENST00000554574 INSRP06213 1382 aa6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 CPS1P31327 1500 aa6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 ADARB2-AS1A8MUL3 147 aa6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 U2SURPO15042 1029 aaKnown RBP6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 ARAFP10398 606 aa6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 MX2P20592 715 aa6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 CDK11BP21127 795 aaKnown RBP6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 ZNF165P49910 485 aa6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 CNGB1Q14028 1251 aaPredicted RBP6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 LRRC14Q15048 493 aa6.2□□□□□ -1.42
PPP4R3A-204ENST00000554574 CC2D1BQ5T0F9 858 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms