RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 HSP90B2PQ58FF3 399 aa19.26■□□□□ 0.67
PPP4R3A-202ENST00000554390 MED15Q96RN5 788 aa19.26■□□□□ 0.67
PPP4R3A-202ENST00000554390 RHOXF2Q9BQY4 288 aa19.26■□□□□ 0.67
PPP4R3A-202ENST00000554390 PRDM11Q9NQV5 511 aa19.26■□□□□ 0.67
PPP4R3A-202ENST00000554390 TEX33O43247 280 aa19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 NCAPGQ9BPX3 1015 aa19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 C1orf167Q5SNV9 1468 aa19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 MYO1BO43795 1136 aa19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 CCDC175P0C221 793 aa19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 TRIM29Q14134 588 aa19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 CCDC102BQ68D86 513 aa19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 GPR108Q9NPR9 543 aa19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 TBC1D2BQ9UPU7 963 aa19.25■□□□□ 0.67
PPP4R3A-202ENST00000554390 TRPM3Q9HCF6 1732 aaPredicted RBP19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 TOB1P50616 345 aaPredicted RBP19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 VSNL1P62760 191 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 SART3Q15020 963 aaKnown RBP19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 FAM71BQ8TC56 605 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 AIDAQ96BJ3 306 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 ZMYM6O95789 1325 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 SOWAHDA6NJG2 315 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 PRDM1O75626 825 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 ABL1P00519 1130 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 ADD2P35612 726 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 DIS3L2Q8IYB7 885 aaKnown RBP19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 MAGEB6Q8N7X4 407 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 MYCBPQ99417 103 aaPredicted RBP19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 EPB41L4AQ9HCS5 686 aaPredicted RBP19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 HPSEQ9Y251 543 aa19.24■□□□□ 0.67
PPP4R3A-202ENST00000554390 WTIPA6NIX2 430 aaPredicted RBP19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 MBD4O95243 580 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 TCIRG1Q13488 830 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 SLC4A8Q2Y0W8 1093 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 DEF6Q9H4E7 631 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 PDE6AP16499 860 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 NTRK3Q16288 839 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 MAN1B1Q9UKM7 699 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 IGDCC4Q8TDY8 1250 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 FAM204AQ9H8W3 233 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 LY9Q9HBG7 655 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 SLC12A7Q9Y666 1083 aa19.23■□□□□ 0.67
PPP4R3A-202ENST00000554390 MYO5AQ9Y4I1 1855 aaKnown RBP19.22■□□□□ 0.67
PPP4R3A-202ENST00000554390 RESP18Q5W5W9 173 aa19.22■□□□□ 0.67
PPP4R3A-202ENST00000554390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.22■□□□□ 0.676e-9■■■■■ 26.9
PPP4R3A-202ENST00000554390 WNT7AO00755 349 aa19.22■□□□□ 0.67
PPP4R3A-202ENST00000554390 KIF5CO60282 957 aa19.22■□□□□ 0.67
PPP4R3A-202ENST00000554390 KIF4BQ2VIQ3 1234 aa19.22■□□□□ 0.67
PPP4R3A-202ENST00000554390 CABP5Q9NP86 173 aa19.22■□□□□ 0.67
PPP4R3A-202ENST00000554390 CHRM1P11229 460 aaPredicted RBP19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 E2F4Q16254 413 aa19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 ZNF569Q5MCW4 686 aa19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 EPSTI1Q96J88 318 aa19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 LRRIQ3A6PVS8 624 aaPredicted RBP19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 CIAO1O76071 339 aa19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 SKIDA1Q1XH10 827 aa19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 TTLL11Q8NHH1 800 aa19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 NAPBQ9H115 298 aa19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 RNF216Q9NWF9 866 aaPredicted RBP19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 ADGRG1Q9Y653 693 aa19.21■□□□□ 0.67
PPP4R3A-202ENST00000554390 EARS2Q5JPH6 523 aaKnown RBP19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 TEX13AQ9BXU3 409 aaPredicted RBP19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 PPFIA4O75335 1185 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 ZFYP08048 801 aaPredicted RBP19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 RAD9BQ6WBX8 426 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 GPATCH11Q8N954 259 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 ISCA1Q9BUE6 129 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 TRMT112Q9UI30 125 aaKnown RBP19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 MINDY4BA8MYZ0 360 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 CDC25AP30304 524 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 SSRP1Q08945 709 aaKnown RBP19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 POSTNQ15063 836 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 EFCAB13Q8IY85 973 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 EEF2KMTQ96G04 330 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.2■□□□□ 0.664e-6■■■■□ 23.9
PPP4R3A-202ENST00000554390 RAI14Q9P0K7 980 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 MAPK8IP1Q9UQF2 711 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 SRCAPQ6ZRS2 3230 aa19.2■□□□□ 0.66
PPP4R3A-202ENST00000554390 CPDO75976 1380 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 A0A087X0B3 334 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 CYP2D7A0A087X1C5 515 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 EVX2Q03828 476 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 NOSTRINQ8IVI9 506 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 KRI1Q8N9T8 703 aaKnown RBP19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 SDR42E1Q8WUS8 393 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 KIF1AQ12756 1690 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 ZNF18P17022 549 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 CPLX2Q6PUV4 134 aaKnown RBP19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 GBP3Q9H0R5 595 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 CSRNP2Q9H175 543 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 MED4Q9NPJ6 270 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 VPS54Q9P1Q0 977 aa19.19■□□□□ 0.66
PPP4R3A-202ENST00000554390 AKR1B15C9JRZ8 316 aaPredicted RBP19.18■□□□□ 0.66
PPP4R3A-202ENST00000554390 CCT6AP40227 531 aaKnown RBP19.18■□□□□ 0.66
PPP4R3A-202ENST00000554390 JMYQ8N9B5 988 aa19.18■□□□□ 0.66
PPP4R3A-202ENST00000554390 CTAGE9A4FU28 777 aa19.18■□□□□ 0.66
PPP4R3A-202ENST00000554390 CPP00450 1065 aa19.18■□□□□ 0.66
PPP4R3A-202ENST00000554390 DNAJC21Q5F1R6 531 aaKnown RBP19.18■□□□□ 0.66
PPP4R3A-202ENST00000554390 TADA2BQ86TJ2 420 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms