RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 LINC00116Q8NCU8 138 aa8.09□□□□□ -1.11
ATXN3-226ENST00000554350 TTC21AQ8NDW8 1320 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 PASKQ96RG2 1323 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 MMP20O60882 483 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 RFX1P22670 979 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 NOS3P29474 1203 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 TRIP4Q15650 581 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-226ENST00000554350 SWI5Q1ZZU3 235 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 EAPPQ56P03 285 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-226ENST00000554350 CAPN12Q6ZSI9 719 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 WFDC8Q8IUA0 241 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.08□□□□□ -1.12
ATXN3-226ENST00000554350 STK32AQ8WU08 396 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 WFDC12Q8WWY7 111 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 TP53INP1Q96A56 240 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 PCGF6Q9BYE7 350 aa8.08□□□□□ -1.12
ATXN3-226ENST00000554350 C4AP0C0L4 1744 aa8.07□□□□□ -1.12
ATXN3-226ENST00000554350 RASSF10A6NK89 507 aa8.07□□□□□ -1.12
ATXN3-226ENST00000554350 J3QW42 95 aa8.07□□□□□ -1.12
ATXN3-226ENST00000554350 TNFRSF10BO14763 440 aa8.07□□□□□ -1.12
ATXN3-226ENST00000554350 PRMT3O60678 531 aa8.07□□□□□ -1.12
ATXN3-226ENST00000554350 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
ATXN3-226ENST00000554350 HABP4Q5JVS0 413 aaKnown RBP8.07□□□□□ -1.12
ATXN3-226ENST00000554350 LDHDQ86WU2 507 aa8.07□□□□□ -1.12
ATXN3-226ENST00000554350 CMTR1Q8N1G2 835 aaKnown RBP8.07□□□□□ -1.12
ATXN3-226ENST00000554350 LTN1O94822 1766 aa8.07□□□□□ -1.12
ATXN3-226ENST00000554350 CASP8AP2Q9UKL3 1982 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 KDM6AO15550 1401 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-226ENST00000554350 LOC102724428A0A0B4J2F2 783 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 SCO2A0A1W2PP80 73 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 EIF2AK2P19525 551 aaKnown RBP8.06□□□□□ -1.12
ATXN3-226ENST00000554350 RFC4P35249 363 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 ECE1P42892 770 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 IREB2P48200 963 aaKnown RBP8.06□□□□□ -1.12
ATXN3-226ENST00000554350 SIK1P57059 783 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 PLD4Q96BZ4 506 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 MEGF10Q96KG7 1140 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 CAPNS2Q96L46 248 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 GPR101Q96P66 508 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-226ENST00000554350 PSMG3-AS1Q96PY0 264 aa8.06□□□□□ -1.12
ATXN3-226ENST00000554350 CCDC88AQ3V6T2 1871 aa8.05□□□□□ -1.12
ATXN3-226ENST00000554350 IQCA1LA6NCM1 817 aa8.05□□□□□ -1.12
ATXN3-226ENST00000554350 DDNO94850 711 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-226ENST00000554350 GYS1P13807 737 aa8.05□□□□□ -1.12
ATXN3-226ENST00000554350 CYP4F22Q6NT55 531 aa8.05□□□□□ -1.12
ATXN3-226ENST00000554350 IGF2-ASQ6U949 168 aa8.05□□□□□ -1.12
ATXN3-226ENST00000554350 KRTAP9-2Q9BYQ4 174 aa8.05□□□□□ -1.12
ATXN3-226ENST00000554350 ZFP64Q9NPA5 681 aa8.05□□□□□ -1.12
ATXN3-226ENST00000554350 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.05□□□□□ -1.12
ATXN3-226ENST00000554350 CENPJQ9HC77 1338 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-226ENST00000554350 MEGF6O75095 1541 aa8.04□□□□□ -1.12
ATXN3-226ENST00000554350 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-226ENST00000554350 SOX18P35713 384 aa8.04□□□□□ -1.12
ATXN3-226ENST00000554350 ITPK1Q13572 414 aa8.04□□□□□ -1.12
ATXN3-226ENST00000554350 RAPGEF4Q8WZA2 1011 aa8.04□□□□□ -1.12
ATXN3-226ENST00000554350 COL26A1Q96A83 441 aa8.04□□□□□ -1.12
ATXN3-226ENST00000554350 NSUN5Q96P11 429 aaKnown RBP8.04□□□□□ -1.12
ATXN3-226ENST00000554350 KTN1Q86UP2 1357 aaKnown RBP8.04□□□□□ -1.12
ATXN3-226ENST00000554350 PSAPP07602 524 aa8.03□□□□□ -1.12
ATXN3-226ENST00000554350 C16orf46Q6P387 395 aa8.03□□□□□ -1.12
ATXN3-226ENST00000554350 NME9Q86XW9 330 aa8.03□□□□□ -1.12
ATXN3-226ENST00000554350 USHBP1Q8N6Y0 703 aa8.03□□□□□ -1.12
ATXN3-226ENST00000554350 PIGBQ92521 554 aa8.03□□□□□ -1.12
ATXN3-226ENST00000554350 CXXC1Q9P0U4 656 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-226ENST00000554350 PCDH11XQ9BZA7 1347 aa8.03□□□□□ -1.12
ATXN3-226ENST00000554350 PCDH11YQ9BZA8 1340 aa8.03□□□□□ -1.12
ATXN3-226ENST00000554350 FAM208AQ9UK61 1670 aaKnown RBP8.02□□□□□ -1.13
ATXN3-226ENST00000554350 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-226ENST00000554350 NFKBIEO00221 500 aa8.02□□□□□ -1.13
ATXN3-226ENST00000554350 CA12O43570 354 aa8.02□□□□□ -1.13
ATXN3-226ENST00000554350 AOC2O75106 756 aa8.02□□□□□ -1.13
ATXN3-226ENST00000554350 ARID4AP29374 1257 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-226ENST00000554350 SETDB1Q15047 1291 aa8.02□□□□□ -1.13
ATXN3-226ENST00000554350 MAP1SQ66K74 1059 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-226ENST00000554350 CNTROBQ8N137 903 aa8.02□□□□□ -1.13
ATXN3-226ENST00000554350 TTLL6Q8N841 843 aa8.02□□□□□ -1.13
ATXN3-226ENST00000554350 SLC17A8Q8NDX2 589 aa8.02□□□□□ -1.13
ATXN3-226ENST00000554350 IP6K1Q92551 441 aa8.02□□□□□ -1.13
ATXN3-226ENST00000554350 TAF1DQ9H5J8 278 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-226ENST00000554350 BRD2P25440 801 aaKnown RBP8.01□□□□□ -1.13
ATXN3-226ENST00000554350 ZEB1P37275 1124 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-226ENST00000554350 AMPHP49418 695 aa8.01□□□□□ -1.13
ATXN3-226ENST00000554350 LRP8Q14114 963 aa8.01□□□□□ -1.13
ATXN3-226ENST00000554350 TMEM164Q5U3C3 297 aa8.01□□□□□ -1.13
ATXN3-226ENST00000554350 GDF6Q6KF10 455 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-226ENST00000554350 DZIP1LQ8IYY4 767 aaKnown RBP8.01□□□□□ -1.13
ATXN3-226ENST00000554350 MKNK1Q9BUB5 465 aa8.01□□□□□ -1.13
ATXN3-226ENST00000554350 TRIM33Q9UPN9 1127 aa8.01□□□□□ -1.13
ATXN3-226ENST00000554350 EVC2Q86UK5 1308 aa8.01□□□□□ -1.13
ATXN3-226ENST00000554350 LTBP1Q14766 1721 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 KRTAP9-6A0A140TA67 174 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 TM4SF5O14894 197 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 ALX3O95076 343 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 ATG7O95352 703 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 DDR1Q08345 913 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 ADAMTSL4Q6UY14 1074 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 OR13H1Q8NG92 308 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 TMOD3Q9NYL9 352 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 ASAP1Q9ULH1 1129 aa8□□□□□ -1.13
ATXN3-226ENST00000554350 CGNL1Q0VF96 1302 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms