RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 PRAMEF19Q5SWL8 479 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 CTU1Q7Z7A3 348 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 TTC6Q86TZ1 520 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 DNAJC5GQ8N7S2 189 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ZC3H15Q8WU90 426 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 LRRC2Q9BYS8 371 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 SENP6Q9GZR1 1112 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 CPVLQ9H3G5 476 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 CHMP4BQ9H444 224 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 MTUS1Q9ULD2 1270 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ATP11BQ9Y2G3 1177 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 DDX49Q9Y6V7 483 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 C4BP0C0L5 1744 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 PEAK1Q9H792 1746 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 AKAP12Q02952 1782 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 COL22A1Q8NFW1 1626 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 BTBD19C9JJ37 291 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 IGF2BP3O00425 579 aaKnown RBP eCLIP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ERC2O15083 957 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 EVI5O60447 810 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 GOLGA8HP0CJ92 632 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 HSPA8P11142 646 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 CETPP11597 493 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 RXRAP19793 462 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 IGFBP4P22692 258 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 CYP2C19P33261 490 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 SLC16A2P36021 539 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 MAP2K2P36507 400 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 UBXN2AP68543 259 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 LAPTM4AQ15012 233 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ZRSR1Q15695 479 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 MAP3K11Q16584 847 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 SPRYD7Q5W111 196 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 RALYLQ86SE5 291 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 FCHSD1Q86WN1 690 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ERO1BQ86YB8 467 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ANKRD44Q8N8A2 993 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 TTC16Q8NEE8 873 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 HOOK2Q96ED9 719 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 FBXO28Q9NVF7 368 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 PAG1Q9NWQ8 432 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 SERPINB13Q9UIV8 391 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 DBNLQ9UJU6 430 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 PTCH2Q9Y6C5 1203 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 TLL2Q9Y6L7 1015 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 RGPD1P0DJD0 1748 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 N4BP2Q86UW6 1770 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 hCG_1642624A0A1W2PR95 340 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 MANSC4A6NHS7 340 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 SMIM22K7EJ46 135 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ADCY3O60266 1144 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 USP2O75604 605 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 PGK2P07205 417 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 SLC3A2P08195 630 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 CALML3P27482 149 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 GTF2A2P52657 109 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ICA1Q05084 483 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 CTDSPL2Q05D32 466 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ALDH1L2Q3SY69 923 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ERC1Q8IUD2 1116 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 C7orf61Q8IZ16 206 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 TDRD7Q8NHU6 1098 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ACER1Q8TDN7 264 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 KAZALD1Q96I82 304 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 WNK4Q96J92 1243 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 LBHD1Q9BQE6 289 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 RWDD1Q9H446 243 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 PIH1D3Q9NQM4 214 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 GPHNQ9NQX3 736 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 BRWD1Q9NSI6 2320 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 CNOT1A5YKK6 2376 aaKnown RBP2.98□□□□□ -1.93
PRPF39-205ENST00000554081 FRMPD2Q68DX3 1309 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 TOPAZ1Q8N9V7 1692 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ERICH2A1L162 156 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 USP17L10C9JJH3 530 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 CYP2E1P05181 493 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 C6orf222P0C671 652 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 MYCLP12524 364 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 TAL1P17542 331 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 OSBPP22059 807 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 GRK4P32298 578 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 SLC1A4P43007 532 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ATP8B2P98198 1209 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PRKCZQ05513 592 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 KCTD1Q719H9 257 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 RASAL3Q86YV0 1011 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 BRI3BPQ8WY22 251 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PAWRQ96IZ0 340 aaKnown RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 SLKQ9H2G2 1235 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 DDX4Q9NQI0 724 aaKnown RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PI4KBQ9UBF8 816 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 SLX4Q8IY92 1834 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 IL16Q14005 1332 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 LMO7Q8WWI1 1683 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 SPDYE4A6NLX3 237 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 USP17L5A8MUK1 530 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PQBP1O60828 265 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms