RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CDK8P49336 464 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 EVX2Q03828 476 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 PPATQ06203 517 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 PDE4BQ07343 736 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 DNAJC5GQ8N7S2 189 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 ESYT1Q9BSJ8 1104 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 ROBO3Q96MS0 1386 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 AOC2O75106 756 aa16.46■□□□□ 0.23
TUBB3-202ENST00000553656 PTPRAP18433 802 aa16.46■□□□□ 0.23
TUBB3-202ENST00000553656 PPIL2Q13356 520 aa16.46■□□□□ 0.23
TUBB3-202ENST00000553656 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-202ENST00000553656 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
TUBB3-202ENST00000553656 CCDC17Q96LX7 622 aa16.46■□□□□ 0.23
TUBB3-202ENST00000553656 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.23
TUBB3-202ENST00000553656 IL25Q9H293 177 aa16.46■□□□□ 0.23
TUBB3-202ENST00000553656 AS3MTQ9HBK9 375 aa16.46■□□□□ 0.23
TUBB3-202ENST00000553656 ZBTB21Q9ULJ3 1066 aa16.46■□□□□ 0.23
TUBB3-202ENST00000553656 MANSC4A6NHS7 340 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-202ENST00000553656 USP17L5A8MUK1 530 aa16.45■□□□□ 0.22
TUBB3-202ENST00000553656 ZNF213O14771 459 aa16.45■□□□□ 0.22
TUBB3-202ENST00000553656 GH2P01242 217 aa16.45■□□□□ 0.22
TUBB3-202ENST00000553656 SREBF2Q12772 1141 aa16.45■□□□□ 0.22
TUBB3-202ENST00000553656 RRP1BQ14684 758 aaKnown RBP16.45■□□□□ 0.22
TUBB3-202ENST00000553656 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
TUBB3-202ENST00000553656 ZNF444Q8N0Y2 327 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-202ENST00000553656 ANO2Q9NQ90 1003 aa16.45■□□□□ 0.22
TUBB3-202ENST00000553656 ZHX2Q9Y6X8 837 aa16.45■□□□□ 0.22
TUBB3-202ENST00000553656 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-202ENST00000553656 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
TUBB3-202ENST00000553656 GTF2A2P52657 109 aa16.44■□□□□ 0.22
TUBB3-202ENST00000553656 HAND2P61296 217 aa16.44■□□□□ 0.22
TUBB3-202ENST00000553656 KIF23Q02241 960 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-202ENST00000553656 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
TUBB3-202ENST00000553656 RAB3GAP1Q15042 981 aa16.44■□□□□ 0.22
TUBB3-202ENST00000553656 TMEM179Q6ZVK1 233 aa16.44■□□□□ 0.22
TUBB3-202ENST00000553656 ANAPC4Q9UJX5 808 aa16.44■□□□□ 0.22
TUBB3-202ENST00000553656 MYH8P13535 1937 aa16.44■□□□□ 0.22
TUBB3-202ENST00000553656 ATAD5Q96QE3 1844 aa16.44■□□□□ 0.22
TUBB3-202ENST00000553656 IRF6O14896 467 aa16.43■□□□□ 0.22
TUBB3-202ENST00000553656 GJA5P36382 358 aa16.43■□□□□ 0.22
TUBB3-202ENST00000553656 CTDSPL2Q05D32 466 aa16.43■□□□□ 0.22
TUBB3-202ENST00000553656 BEGAINQ9BUH8 593 aa16.43■□□□□ 0.22
TUBB3-202ENST00000553656 RNF41Q9H4P4 317 aaPredicted RBP16.43■□□□□ 0.22
TUBB3-202ENST00000553656 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
TUBB3-202ENST00000553656 THSD7BQ9C0I4 1608 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 TRIM75PA6NK02 468 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 CXCL11O14625 94 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 PRDM1O75626 825 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 PCP11498 1178 aaKnown RBP16.42■□□□□ 0.22
TUBB3-202ENST00000553656 CETPP11597 493 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 AKR1B1P15121 316 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 INHBEP58166 350 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-202ENST00000553656 PTH1RQ03431 593 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 CCDC84Q86UT8 332 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-202ENST00000553656 ZNF280CQ8ND82 737 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 FEZ1Q99689 392 aa16.42■□□□□ 0.22
TUBB3-202ENST00000553656 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-202ENST00000553656 CCL15-CCL14A0A0B4J2E2 113 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 RASA1P20936 1047 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 SPP2Q13103 211 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 CCL15Q16663 113 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 SHROOM1Q2M3G4 852 aaPredicted RBP16.41■□□□□ 0.22
TUBB3-202ENST00000553656 RRP12Q5JTH9 1297 aaKnown RBP16.41■□□□□ 0.22
TUBB3-202ENST00000553656 OTUD7BQ6GQQ9 843 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 MFSD6Q6ZSS7 791 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 KCNH4Q9UQ05 1017 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
TUBB3-202ENST00000553656 LAMA4Q16363 1823 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 TSPY2A6NKD2 308 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 RANBP6O60518 1105 aaKnown RBP16.4■□□□□ 0.22
TUBB3-202ENST00000553656 REC8O95072 547 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 JAG1P78504 1218 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 ICA1Q05084 483 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 SEPT2Q15019 361 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 JMYQ8N9B5 988 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 STAG1Q8WVM7 1258 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 MAP4K1Q92918 833 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 ZIC5Q96T25 663 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 WDR18Q9BV38 432 aa16.4■□□□□ 0.22
TUBB3-202ENST00000553656 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
TUBB3-202ENST00000553656 ORC4O43929 436 aa16.39■□□□□ 0.21
TUBB3-202ENST00000553656 FASTKD5Q7L8L6 764 aaKnown RBP16.39■□□□□ 0.21
TUBB3-202ENST00000553656 TBC1D10CQ8IV04 446 aa16.39■□□□□ 0.21
TUBB3-202ENST00000553656 MS4A4AQ96JQ5 239 aa16.39■□□□□ 0.21
TUBB3-202ENST00000553656 LSG1Q9H089 658 aaKnown RBP16.39■□□□□ 0.21
TUBB3-202ENST00000553656 SH2D4AQ9H788 454 aa16.39■□□□□ 0.21
TUBB3-202ENST00000553656 KANSL2Q9H9L4 492 aa16.39■□□□□ 0.21
TUBB3-202ENST00000553656 ARHGEF10LQ9HCE6 1279 aa16.39■□□□□ 0.21
TUBB3-202ENST00000553656 TMOD4Q9NZQ9 345 aa16.39■□□□□ 0.21
TUBB3-202ENST00000553656 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
TUBB3-202ENST00000553656 C19orf81C9J6K1 198 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 USP17L10C9JJH3 530 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
TUBB3-202ENST00000553656 TM4SF4P48230 202 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 NT5C2P49902 561 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms