RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 DLK2Q6UY11 383 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 Q6ZUG5 572 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 ZC3H15Q8WU90 426 aaKnown RBP11.51□□□□□ -0.57
CHD8-204ENST00000553622 HOOK2Q96ED9 719 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 TEPSINQ96N21 525 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 LARP6Q9BRS8 491 aaKnown RBP11.51□□□□□ -0.57
CHD8-204ENST00000553622 GLIS2Q9BZE0 524 aaPredicted RBP11.51□□□□□ -0.57
CHD8-204ENST00000553622 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
CHD8-204ENST00000553622 ZSWIM5Q9P217 1185 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 HERC5Q9UII4 1024 aaKnown RBP11.51□□□□□ -0.57
CHD8-204ENST00000553622 PPP2R3BQ9Y5P8 575 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 GREB1LQ9C091 1923 aaPredicted RBP11.5□□□□□ -0.57
CHD8-204ENST00000553622 ERICH2A1L162 156 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 IFIT3O14879 490 aaKnown RBP11.5□□□□□ -0.57
CHD8-204ENST00000553622 GDF11O95390 407 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 AKR1B1P15121 316 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 ANTXR2P58335 489 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 GABPAQ06546 454 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 PRKG1Q13976 671 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 TTLL12Q14166 644 aaPredicted RBP11.5□□□□□ -0.57
CHD8-204ENST00000553622 SUPT20HL1Q3ZLR7 823 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 CERKLQ49MI3 558 aaPredicted RBP11.5□□□□□ -0.57
CHD8-204ENST00000553622 TMEM67Q5HYA8 995 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 DCAF15Q66K64 600 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 HSCBQ8IWL3 235 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 IL17RAQ96F46 866 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 DNAJC18Q9H819 358 aa11.5□□□□□ -0.57
CHD8-204ENST00000553622 GPBP1L1Q9HC44 474 aaPredicted RBP11.5□□□□□ -0.57
CHD8-204ENST00000553622 NMT2O60551 498 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 FGRP09769 529 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 NF2P35240 595 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 AK2P54819 239 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 ATP2B2Q01814 1243 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 ABCB5Q2M3G0 1257 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 CDC37L1Q7L3B6 337 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 LDHDQ86WU2 507 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 CDCA5Q96FF9 252 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 ZNF408Q9H9D4 720 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
CHD8-204ENST00000553622 PGAP2Q9UHJ9 254 aa11.49□□□□□ -0.57
CHD8-204ENST00000553622 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
CHD8-204ENST00000553622 EXOSC10Q01780 885 aaKnown RBP11.48□□□□□ -0.57
CHD8-204ENST00000553622 BECN1Q14457 450 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 WTAPQ15007 396 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 RAB3GAP1Q15042 981 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 ANKRD1Q15327 319 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 BRF1Q92994 677 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 TMEM87BQ96K49 555 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 CCDC17Q96LX7 622 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 TTC14Q96N46 770 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 ZSCAN10Q96SZ4 725 aaPredicted RBP11.48□□□□□ -0.57
CHD8-204ENST00000553622 ZNF341Q9BYN7 854 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 CABP5Q9NP86 173 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 DAXXQ9UER7 740 aaPredicted RBP11.48□□□□□ -0.57
CHD8-204ENST00000553622 FZD1Q9UP38 647 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 TNKSO95271 1327 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 WDR19Q8NEZ3 1342 aa11.48□□□□□ -0.57
CHD8-204ENST00000553622 SSC5DA1L4H1 1573 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 CCDC69A6NI79 296 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 TRAF5O00463 557 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 SH2B2O14492 632 aaPredicted RBP11.47□□□□□ -0.57
CHD8-204ENST00000553622 TBC1D12O60347 775 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 GH2P01242 217 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 APOBRQ0VD83 1088 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 SHROOM1Q2M3G4 852 aaPredicted RBP11.47□□□□□ -0.57
CHD8-204ENST00000553622 IFIT1BQ5T764 474 aaKnown RBP11.47□□□□□ -0.57
CHD8-204ENST00000553622 TATDN1Q6P1N9 297 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 METTL16Q86W50 562 aaKnown RBP11.47□□□□□ -0.57
CHD8-204ENST00000553622 RAB11FIP4Q86YS3 637 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 CLEC10AQ8IUN9 316 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 NEDD1Q8NHV4 660 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 CHMP4CQ96CF2 233 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 WRNIP1Q96S55 665 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 TAOK2Q9UL54 1235 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 STX8Q9UNK0 236 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 ANGEL1Q9UNK9 670 aaKnown RBP11.47□□□□□ -0.57
CHD8-204ENST00000553622 MTMR7Q9Y216 660 aa11.47□□□□□ -0.57
CHD8-204ENST00000553622 BAZ2BQ9UIF8 2168 aaKnown RBP11.47□□□□□ -0.57
CHD8-204ENST00000553622 PHIPQ8WWQ0 1821 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 KLF18A0A0U1RQI7 1052 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 RAD21O60216 631 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 YY1P25490 414 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 MCM2P49736 904 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 NT5C2P49902 561 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 STK3Q13188 491 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 TOB2Q14106 344 aaPredicted RBP11.46□□□□□ -0.57
CHD8-204ENST00000553622 RRP1BQ14684 758 aaKnown RBP11.46□□□□□ -0.57
CHD8-204ENST00000553622 SEPT2Q15019 361 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 CCDC178Q5BJE1 867 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 CHADLQ6NUI6 762 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 SYNE3Q6ZMZ3 975 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 TMEM179Q6ZVK1 233 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
CHD8-204ENST00000553622 IGDCC4Q8TDY8 1250 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 CEP95Q96GE4 821 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 LY9Q9HBG7 655 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 SENP2Q9HC62 589 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms