RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 PI4KBQ9UBF8 816 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 UNC80Q8N2C7 3258 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 PFASO15067 1338 aa14.5□□□□□ -0.09
SRP54-203ENST00000553544 A0A1B0GUL7 405 aa14.5□□□□□ -0.09
SRP54-203ENST00000553544 C19orf81C9J6K1 198 aa14.5□□□□□ -0.09
SRP54-203ENST00000553544 ZKSCAN1P17029 563 aaPredicted RBP14.5□□□□□ -0.09
SRP54-203ENST00000553544 MDM2Q00987 491 aaPredicted RBP14.5□□□□□ -0.09
SRP54-203ENST00000553544 RRP1BQ14684 758 aaKnown RBP14.5□□□□□ -0.09
SRP54-203ENST00000553544 LHX8Q68G74 356 aa14.5□□□□□ -0.09
SRP54-203ENST00000553544 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.5□□□□□ -0.09
SRP54-203ENST00000553544 NSUN4Q96CB9 384 aaKnown RBP14.5□□□□□ -0.09
SRP54-203ENST00000553544 NEUROD6Q96NK8 337 aa14.5□□□□□ -0.09
SRP54-203ENST00000553544 LBHD1Q9BQE6 289 aaPredicted RBP14.5□□□□□ -0.09
SRP54-203ENST00000553544 DHX36Q9H2U1 1008 aaKnown RBP14.5□□□□□ -0.09
SRP54-203ENST00000553544 RBPJLQ9UBG7 517 aa14.5□□□□□ -0.09
SRP54-203ENST00000553544 ASNSP08243 561 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 RGS2P41220 211 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 HERVK_113P62684 666 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 MTMR2Q13614 643 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 LRRC26Q2I0M4 334 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 GORABQ5T7V8 394 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 FOXP4Q8IVH2 680 aaPredicted RBP14.49□□□□□ -0.09
SRP54-203ENST00000553544 ITPRIPQ8IWB1 547 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 TEX11Q8IYF3 940 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 ZNF384Q8TF68 577 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 NOL10Q9BSC4 688 aaKnown RBP14.49□□□□□ -0.09
SRP54-203ENST00000553544 TXNRD2Q9NNW7 524 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 RAI14Q9P0K7 980 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 HMG20BQ9P0W2 317 aa14.49□□□□□ -0.09
SRP54-203ENST00000553544 USP17L10C9JJH3 530 aa14.48□□□□□ -0.09
SRP54-203ENST00000553544 CCND3P30281 292 aaPredicted RBP14.48□□□□□ -0.09
SRP54-203ENST00000553544 G3BP1Q13283 466 aaKnown RBP eCLIP14.48□□□□□ -0.09
SRP54-203ENST00000553544 Q3C1V9 767 aa14.48□□□□□ -0.09
SRP54-203ENST00000553544 TBC1D9Q6ZT07 1266 aa14.48□□□□□ -0.09
SRP54-203ENST00000553544 PLEKHH3Q7Z736 793 aa14.48□□□□□ -0.09
SRP54-203ENST00000553544 SPATA5Q8NB90 893 aa14.48□□□□□ -0.09
SRP54-203ENST00000553544 PANK1Q8TE04 598 aa14.48□□□□□ -0.09
SRP54-203ENST00000553544 GTF3C2Q8WUA4 911 aaPredicted RBP14.48□□□□□ -0.09
SRP54-203ENST00000553544 USP6NLQ92738 828 aa14.48□□□□□ -0.09
SRP54-203ENST00000553544 C1orf115Q9H7X2 142 aa14.48□□□□□ -0.09
SRP54-203ENST00000553544 GINM1Q9NU53 330 aa14.48□□□□□ -0.09
SRP54-203ENST00000553544 ALPK3Q96L96 1907 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 LAMA2P24043 3122 aaKnown RBP14.47□□□□□ -0.09
SRP54-203ENST00000553544 MYO5AQ9Y4I1 1855 aaKnown RBP14.47□□□□□ -0.09
SRP54-203ENST00000553544 PEX10O60683 326 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 GLRX3O76003 335 aaKnown RBP14.47□□□□□ -0.09
SRP54-203ENST00000553544 BAG3O95817 575 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 ERVK-9P63128 1117 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 ERVK-24P63145 666 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 MORN1Q5T089 497 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 SENP6Q9GZR1 1112 aaPredicted RBP14.47□□□□□ -0.09
SRP54-203ENST00000553544 CWC22Q9HCG8 908 aaKnown RBP14.47□□□□□ -0.09
SRP54-203ENST00000553544 LRP2BPQ9P2M1 347 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 NOP58Q9Y2X3 529 aaKnown RBP14.47□□□□□ -0.09
SRP54-203ENST00000553544 PHIPQ8WWQ0 1821 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 DOCK2Q92608 1830 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 PTPRFP10586 1907 aa14.47□□□□□ -0.09
SRP54-203ENST00000553544 DOCK1Q14185 1865 aa14.46□□□□□ -0.09
SRP54-203ENST00000553544 GPR142Q7Z601 462 aa14.46□□□□□ -0.09
SRP54-203ENST00000553544 CRACR2BQ8N4Y2 399 aaPredicted RBP14.46□□□□□ -0.09
SRP54-203ENST00000553544 SH3RF3Q8TEJ3 882 aaPredicted RBP14.46□□□□□ -0.09
SRP54-203ENST00000553544 EDC3Q96F86 508 aaKnown RBP14.46□□□□□ -0.09
SRP54-203ENST00000553544 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
SRP54-203ENST00000553544 TRIM34Q9BYJ4 488 aa14.46□□□□□ -0.09
SRP54-203ENST00000553544 GPR108Q9NPR9 543 aa14.46□□□□□ -0.09
SRP54-203ENST00000553544 DNAH12Q6ZR08 3092 aa14.46□□□□□ -0.09
SRP54-203ENST00000553544 COL2A1P02458 1487 aaPredicted RBP14.45□□□□□ -0.1
SRP54-203ENST00000553544 SURF6O75683 361 aaKnown RBP14.45□□□□□ -0.1
SRP54-203ENST00000553544 MS4A1P11836 297 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 PLCG2P16885 1265 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 CCL14Q16627 93 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 MFSD14CQ5VZR4 134 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 CEP85Q6P2H3 762 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 USP17L2Q6R6M4 530 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 FAM161BQ96MY7 647 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 APBA2Q99767 749 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 PAGR1Q9BTK6 254 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 PORCNQ9H237 461 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 PRKAG2Q9UGJ0 569 aa14.45□□□□□ -0.1
SRP54-203ENST00000553544 ARID4AP29374 1257 aaPredicted RBP14.44□□□□□ -0.1
SRP54-203ENST00000553544 CCNA1P78396 465 aa14.44□□□□□ -0.1
SRP54-203ENST00000553544 JAG1P78504 1218 aa14.44□□□□□ -0.1
SRP54-203ENST00000553544 MAP2K5Q13163 448 aa14.44□□□□□ -0.1
SRP54-203ENST00000553544 ZNF697Q5TEC3 545 aa14.44□□□□□ -0.1
SRP54-203ENST00000553544 PI16Q6UXB8 463 aa14.44□□□□□ -0.1
SRP54-203ENST00000553544 METTL16Q86W50 562 aaKnown RBP14.44□□□□□ -0.1
SRP54-203ENST00000553544 TGFBRAP1Q8WUH2 860 aa14.44□□□□□ -0.1
SRP54-203ENST00000553544 RCAN3Q9UKA8 241 aa14.44□□□□□ -0.1
SRP54-203ENST00000553544 RABGAP1Q9Y3P9 1069 aa14.44□□□□□ -0.1
SRP54-203ENST00000553544 MSCO60682 206 aa14.43□□□□□ -0.1
SRP54-203ENST00000553544 UQCRFS1P1P0C7P4 283 aa14.43□□□□□ -0.1
SRP54-203ENST00000553544 PPP4CP60510 307 aa14.43□□□□□ -0.1
SRP54-203ENST00000553544 ATP2B2Q01814 1243 aa14.43□□□□□ -0.1
SRP54-203ENST00000553544 TNNI3KQ59H18 835 aa14.43□□□□□ -0.1
SRP54-203ENST00000553544 NAA16Q6N069 864 aaPredicted RBP14.43□□□□□ -0.1
SRP54-203ENST00000553544 EMILIN3Q9NT22 766 aa14.43□□□□□ -0.1
SRP54-203ENST00000553544 AATFQ9NY61 560 aaKnown RBP eCLIP14.43□□□□□ -0.1
SRP54-203ENST00000553544 FPGT-TNNI3KV9GXZ4 949 aa14.43□□□□□ -0.1
SRP54-203ENST00000553544 CDK5RAP2Q96SN8 1893 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms