RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ZNF804AQ7Z570 1209 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 SGMS1Q86VZ5 419 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 IFNL3Q8IZI9 196 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 NECAB1Q8N987 351 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 STAG1Q8WVM7 1258 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 SCAND2PQ9GZW5 306 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-221ENST00000553498 GPBP1L1Q9HC44 474 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-221ENST00000553498 PODXL2Q9NZ53 605 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 ANGEL1Q9UNK9 670 aaKnown RBP8.57□□□□□ -1.04
ATXN3-221ENST00000553498 DDX60Q8IY21 1712 aaKnown RBP8.57□□□□□ -1.04
ATXN3-221ENST00000553498 GSG1L2A8MUP6 293 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 RXRBP28702 533 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 GYG1P46976 350 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 KRT85P78386 507 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 SCRN1Q12765 414 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 SLFNL1Q499Z3 407 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 AKNAD1Q5T1N1 836 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 TTLL5Q6EMB2 1281 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-221ENST00000553498 MFSD6Q6ZSS7 791 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 RIOK1Q9BRS2 568 aaKnown RBP8.56□□□□□ -1.04
ATXN3-221ENST00000553498 ATP8A2Q9NTI2 1148 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 RAI14Q9P0K7 980 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 SLC4A4Q9Y6R1 1079 aa8.56□□□□□ -1.04
ATXN3-221ENST00000553498 IRS2Q9Y4H2 1338 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 AK9Q5TCS8 1911 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 ERICH2A1L162 156 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 VPS37CA5D8V6 355 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 H3BQV1 296 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 POLRMTO00411 1230 aaKnown RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 SH2B2O14492 632 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 SPTLC1O15269 473 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 LDHCP07864 332 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 SLC3A2P08195 630 aaKnown RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 SLC19A1P41440 591 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 TDO2P48775 406 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 SYNE3Q6ZMZ3 975 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 NSUN7Q8NE18 718 aaKnown RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 TDRD7Q8NHU6 1098 aaKnown RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 NSUN4Q96CB9 384 aaKnown RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 TCEANC2Q96MN5 208 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 CRNKL1Q9BZJ0 848 aaKnown RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 ARMT1Q9H993 441 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 ANKIB1Q9P2G1 1089 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 ABCF2Q9UG63 623 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 CFAP45Q9UL16 551 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 NID2Q14112 1375 aa8.55□□□□□ -1.04
ATXN3-221ENST00000553498 MYH14Q7Z406 1995 aaKnown RBP8.55□□□□□ -1.04
ATXN3-221ENST00000553498 DUOX1Q9NRD9 1551 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 KLF18A0A0U1RQI7 1052 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 CCDC196A0A1B0GTZ2 297 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 PTPDC1A2A3K4 754 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 SNAP23O00161 211 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 CPLX1O14810 134 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 BAG3O95817 575 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 FGRP09769 529 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 ALDH1B1P30837 517 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 PDE6BP35913 854 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 HAND2P61296 217 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 APOBRQ0VD83 1088 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 STK3Q13188 491 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 SBK1Q52WX2 424 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 USP48Q86UV5 1035 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 TBC1D10CQ8IV04 446 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 SP8Q8IXZ3 490 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 LCORLQ8N3X6 602 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 TBC1D22AQ8WUA7 517 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 WASF1Q92558 559 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 ESR2Q92731 530 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 GZF1Q9H116 711 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-221ENST00000553498 TMX4Q9H1E5 349 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-221ENST00000553498 EPB41L4AQ9HCS5 686 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-221ENST00000553498 TFCP2L1Q9NZI6 479 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 ARPP21Q9UBL0 812 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-221ENST00000553498 GGA1Q9UJY5 639 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 SUGT1Q9Y2Z0 365 aa8.54□□□□□ -1.04
ATXN3-221ENST00000553498 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
ATXN3-221ENST00000553498 MYH3P11055 1940 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 GOLGA8BA8MQT2 603 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 APBA3O96018 575 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 IL1R1P14778 569 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 NPR1P16066 1061 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 ANTXR2P58335 489 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 PPARAQ07869 468 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 TMEM132AQ24JP5 1023 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 ZSCAN23Q3MJ62 389 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 CCDC178Q5BJE1 867 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 RETREG3Q86VR2 466 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 DZIP1Q86YF9 867 aaKnown RBP8.53□□□□□ -1.04
ATXN3-221ENST00000553498 AMOTL1Q8IY63 956 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 GPT2Q8TD30 523 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 IGDCC4Q8TDY8 1250 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 ANP32BQ92688 251 aaKnown RBP8.53□□□□□ -1.04
ATXN3-221ENST00000553498 ZNF396Q96N95 335 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms