RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 USP17L12C9JPN9 530 aa22.12■■□□□ 1.13
CPSF2-202ENST00000553427 USP17L21D6R901 530 aa22.12■■□□□ 1.13
CPSF2-202ENST00000553427 CYP2D6P10635 497 aa22.12■■□□□ 1.13
CPSF2-202ENST00000553427 ANKRD23Q86SG2 305 aa22.12■■□□□ 1.13
CPSF2-202ENST00000553427 SEC62Q99442 399 aaKnown RBP22.12■■□□□ 1.13
CPSF2-202ENST00000553427 PATL2C9JE40 543 aaKnown RBP22.11■■□□□ 1.13
CPSF2-202ENST00000553427 BTBD19C9JJ37 291 aa22.11■■□□□ 1.13
CPSF2-202ENST00000553427 NEFLP07196 543 aa22.11■■□□□ 1.13
CPSF2-202ENST00000553427 JAG1P78504 1218 aa22.11■■□□□ 1.13
CPSF2-202ENST00000553427 CTR9Q6PD62 1173 aa22.11■■□□□ 1.13
CPSF2-202ENST00000553427 FASTKD5Q7L8L6 764 aaKnown RBP22.11■■□□□ 1.13
CPSF2-202ENST00000553427 FAM43AQ8N2R8 423 aa22.11■■□□□ 1.13
CPSF2-202ENST00000553427 ZNF280CQ8ND82 737 aa22.11■■□□□ 1.13
CPSF2-202ENST00000553427 AS3MTQ9HBK9 375 aa22.11■■□□□ 1.13
CPSF2-202ENST00000553427 EPB41L4AQ9HCS5 686 aaPredicted RBP22.11■■□□□ 1.13
CPSF2-202ENST00000553427 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.11■■□□□ 1.13
CPSF2-202ENST00000553427 BAZ2AQ9UIF9 1905 aaKnown RBP22.11■■□□□ 1.13
CPSF2-202ENST00000553427 ROBO3Q96MS0 1386 aa22.11■■□□□ 1.13
CPSF2-202ENST00000553427 PTPRFP10586 1907 aa22.1■■□□□ 1.13
CPSF2-202ENST00000553427 GDF11O95390 407 aa22.1■■□□□ 1.13
CPSF2-202ENST00000553427 TBC1D8O95759 1140 aa22.1■■□□□ 1.13
CPSF2-202ENST00000553427 EVX2Q03828 476 aa22.1■■□□□ 1.13
CPSF2-202ENST00000553427 CERKLQ49MI3 558 aaPredicted RBP22.1■■□□□ 1.13
CPSF2-202ENST00000553427 TTC22Q5TAA0 569 aa22.1■■□□□ 1.13
CPSF2-202ENST00000553427 COL13A1Q5TAT6 717 aaPredicted RBP22.1■■□□□ 1.13
CPSF2-202ENST00000553427 RILPL2Q969X0 211 aa22.1■■□□□ 1.13
CPSF2-202ENST00000553427 NACAP1Q9BZK3 213 aa22.1■■□□□ 1.13
CPSF2-202ENST00000553427 GH2P01242 217 aa22.09■■□□□ 1.13
CPSF2-202ENST00000553427 CRHR2Q13324 411 aa22.09■■□□□ 1.13
CPSF2-202ENST00000553427 C16orf86Q6ZW13 317 aa22.09■■□□□ 1.13
CPSF2-202ENST00000553427 CCDC84Q86UT8 332 aaPredicted RBP22.09■■□□□ 1.13
CPSF2-202ENST00000553427 SLC45A1Q9Y2W3 748 aa22.09■■□□□ 1.13
CPSF2-202ENST00000553427 CYP2D7A0A087X1C5 515 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 A0A0D9SFI3 127 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 TRIM75PA6NK02 468 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 GPR25O00155 361 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 HIP1O00291 1037 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 SDSP20132 328 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 ABCB5Q2M3G0 1257 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 MCMDC2Q4G0Z9 681 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 SH3D19Q5HYK7 790 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 PROCA1Q8NCQ7 364 aaPredicted RBP22.08■■□□□ 1.13
CPSF2-202ENST00000553427 FAM227BQ96M60 508 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 R3HDMLQ9H3Y0 253 aa22.08■■□□□ 1.13
CPSF2-202ENST00000553427 LOC285556D6RIA3 1793 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 FOXP2O15409 715 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 GSPT1P15170 499 aaKnown RBP22.07■■□□□ 1.12
CPSF2-202ENST00000553427 TDO2P48775 406 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 SPP2Q13103 211 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 TAF1CQ15572 869 aaPredicted RBP22.07■■□□□ 1.12
CPSF2-202ENST00000553427 SHROOM1Q2M3G4 852 aaPredicted RBP22.07■■□□□ 1.12
CPSF2-202ENST00000553427 GPAT2Q6NUI2 795 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 IFNL3Q8IZI9 196 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 SLC44A5Q8NCS7 719 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 DYNLL2Q96FJ2 89 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 CCDC17Q96LX7 622 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 ZFYVE28Q9HCC9 887 aa22.07■■□□□ 1.12
CPSF2-202ENST00000553427 CDK8P49336 464 aa22.06■■□□□ 1.12
CPSF2-202ENST00000553427 NMIQ13287 307 aaPredicted RBP22.06■■□□□ 1.12
CPSF2-202ENST00000553427 CCDC129Q6ZRS4 1044 aa22.06■■□□□ 1.12
CPSF2-202ENST00000553427 CABP5Q9NP86 173 aa22.06■■□□□ 1.12
CPSF2-202ENST00000553427 PDHXO00330 501 aa22.05■■□□□ 1.12
CPSF2-202ENST00000553427 APPP05067 770 aa22.05■■□□□ 1.12
CPSF2-202ENST00000553427 BACE1P56817 501 aa22.05■■□□□ 1.12
CPSF2-202ENST00000553427 ALX1Q15699 326 aa22.05■■□□□ 1.12
CPSF2-202ENST00000553427 TMEM179Q6ZVK1 233 aa22.05■■□□□ 1.12
CPSF2-202ENST00000553427 ZNF296Q8WUU4 475 aaPredicted RBP22.05■■□□□ 1.12
CPSF2-202ENST00000553427 NAPBQ9H115 298 aa22.05■■□□□ 1.12
CPSF2-202ENST00000553427 AGTPBP1Q9UPW5 1226 aa22.05■■□□□ 1.12
CPSF2-202ENST00000553427 ZMYM6O95789 1325 aa22.05■■□□□ 1.12
CPSF2-202ENST00000553427 CCDC171Q6TFL3 1326 aa22.05■■□□□ 1.12
CPSF2-202ENST00000553427 C19orf81C9J6K1 198 aa22.04■■□□□ 1.12
CPSF2-202ENST00000553427 SMIM22K7EJ46 135 aa22.04■■□□□ 1.12
CPSF2-202ENST00000553427 TLR2O60603 784 aa22.04■■□□□ 1.12
CPSF2-202ENST00000553427 FKTNO75072 461 aa22.04■■□□□ 1.12
CPSF2-202ENST00000553427 GUCY1A2P33402 732 aa22.04■■□□□ 1.12
CPSF2-202ENST00000553427 MFAP1P55081 439 aaKnown RBP22.04■■□□□ 1.12
CPSF2-202ENST00000553427 ERICH6BQ5W0A0 696 aa22.04■■□□□ 1.12
CPSF2-202ENST00000553427 PARK7Q99497 189 aaKnown RBP22.04■■□□□ 1.12
CPSF2-202ENST00000553427 DIAPH3Q9NSV4 1193 aa22.04■■□□□ 1.12
CPSF2-202ENST00000553427 ADGRA2Q96PE1 1338 aa22.04■■□□□ 1.12
CPSF2-202ENST00000553427 USP17L10C9JJH3 530 aa22.03■■□□□ 1.12
CPSF2-202ENST00000553427 HMGCS2P54868 508 aa22.03■■□□□ 1.12
CPSF2-202ENST00000553427 MTMR2Q13614 643 aa22.03■■□□□ 1.12
CPSF2-202ENST00000553427 GADL1Q6ZQY3 521 aa22.03■■□□□ 1.12
CPSF2-202ENST00000553427 ZNF589Q86UQ0 364 aaPredicted RBP22.03■■□□□ 1.12
CPSF2-202ENST00000553427 CCDC136Q96JN2 1154 aa22.03■■□□□ 1.12
CPSF2-202ENST00000553427 CASP8AP2Q9UKL3 1982 aa22.03■■□□□ 1.12
CPSF2-202ENST00000553427 MINDY4BA8MYZ0 360 aa22.02■■□□□ 1.12
CPSF2-202ENST00000553427 RAB3GAP1Q15042 981 aa22.02■■□□□ 1.12
CPSF2-202ENST00000553427 VPS53Q5VIR6 699 aa22.02■■□□□ 1.12
CPSF2-202ENST00000553427 C12orf42Q96LP6 360 aa22.02■■□□□ 1.12
CPSF2-202ENST00000553427 KIAA1683Q9H0B3 1180 aa22.02■■□□□ 1.12
CPSF2-202ENST00000553427 ZNF287Q9HBT7 754 aa22.02■■□□□ 1.12
CPSF2-202ENST00000553427 MYH8P13535 1937 aa22.02■■□□□ 1.11
CPSF2-202ENST00000553427 AKR1B1P15121 316 aa22.01■■□□□ 1.11
CPSF2-202ENST00000553427 PABPC4Q13310 644 aaKnown RBP eCLIP22.01■■□□□ 1.11
CPSF2-202ENST00000553427 SEPT2Q15019 361 aa22.01■■□□□ 1.11
CPSF2-202ENST00000553427 TMOD4Q9NZQ9 345 aa22.01■■□□□ 1.11
CPSF2-202ENST00000553427 SLC3A2P08195 630 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms