RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SNAPC2Q13487 334 aa14.03□□□□□ -0.16
TRAFD1-209ENST00000552896 SBK1Q52WX2 424 aa14.03□□□□□ -0.16
TRAFD1-209ENST00000552896 TATDN1Q6P1N9 297 aa14.03□□□□□ -0.16
TRAFD1-209ENST00000552896 MS4A4AQ96JQ5 239 aa14.03□□□□□ -0.16
TRAFD1-209ENST00000552896 FAM227BQ96M60 508 aa14.03□□□□□ -0.16
TRAFD1-209ENST00000552896 TBC1D2Q9BYX2 928 aa14.03□□□□□ -0.16
TRAFD1-209ENST00000552896 DIAPH3Q9NSV4 1193 aa14.03□□□□□ -0.16
TRAFD1-209ENST00000552896 PARP14Q460N5 1801 aa14.03□□□□□ -0.16
TRAFD1-209ENST00000552896 ZMYM6O95789 1325 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 CCDC171Q6TFL3 1326 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 USP17L12C9JPN9 530 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 USP17L21D6R901 530 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 FOXN1O15353 648 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 CYP2D6P10635 497 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 SDSP20132 328 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 SHMT1P34896 483 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 TDO2P48775 406 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 RRP1BQ14684 758 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 MCMDC2Q4G0Z9 681 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 C12orf60Q5U649 245 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 CTR9Q6PD62 1173 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 NACAP1Q9BZK3 213 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 SWAP70Q9UH65 585 aa14.02□□□□□ -0.17
TRAFD1-209ENST00000552896 RAD50Q92878 1312 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 PATL2C9JE40 543 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 FOXP2O15409 715 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 CETPP11597 493 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 MFAP1P55081 439 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 EVX2Q03828 476 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 CCDC129Q6ZRS4 1044 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 C16orf86Q6ZW13 317 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 IFNL1Q8IU54 200 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 ZBTB21Q9ULJ3 1066 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 MGAMO43451 1857 aa14.01□□□□□ -0.17
TRAFD1-209ENST00000552896 CCL15-CCL14A0A0B4J2E2 113 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 USP17L5A8MUK1 530 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 IGF2BP3O00425 579 aaKnown RBP eCLIP14□□□□□ -0.17
TRAFD1-209ENST00000552896 CXCL11O14625 94 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 GDF11O95390 407 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 ALDH1A1P00352 501 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 APPP05067 770 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 CTCFP49711 727 aaPredicted RBP14□□□□□ -0.17
TRAFD1-209ENST00000552896 CCL15Q16663 113 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 ZNF589Q86UQ0 364 aaPredicted RBP14□□□□□ -0.17
TRAFD1-209ENST00000552896 IFNL3Q8IZI9 196 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 BRI3BPQ8WY22 251 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 CFHR5Q9BXR6 569 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 NAPBQ9H115 298 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 AS3MTQ9HBK9 375 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 ZCCHC17Q9NP64 241 aaKnown RBP14□□□□□ -0.17
TRAFD1-209ENST00000552896 RNF186Q9NXI6 227 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 AFG3L2Q9Y4W6 797 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 ZHX2Q9Y6X8 837 aa14□□□□□ -0.17
TRAFD1-209ENST00000552896 CYP2D7A0A087X1C5 515 aa13.99□□□□□ -0.17
TRAFD1-209ENST00000552896 A0A0G2JLL6 359 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-209ENST00000552896 HSPA8P11142 646 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-209ENST00000552896 CERKLQ49MI3 558 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-209ENST00000552896 OTUD7BQ6GQQ9 843 aa13.99□□□□□ -0.17
TRAFD1-209ENST00000552896 PRRT2Q7Z6L0 340 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-209ENST00000552896 SLC44A5Q8NCS7 719 aa13.99□□□□□ -0.17
TRAFD1-209ENST00000552896 TRIM75PA6NK02 468 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 TRPA1O75762 1119 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 GH2P01242 217 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 JAG1P78504 1218 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 ALX1Q15699 326 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 ABCB5Q2M3G0 1257 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 SHROOM1Q2M3G4 852 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 BMP2KLQ5H9B9 411 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 VPS53Q5VIR6 699 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 CWC27Q6UX04 472 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 CCDC84Q86UT8 332 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 ZNF280CQ8ND82 737 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 DYNLL2Q96FJ2 89 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 PTPN18Q99952 460 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 WDR18Q9BV38 432 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 A0A0G2JMZ2 1700 aa13.98□□□□□ -0.17
TRAFD1-209ENST00000552896 PLIN4Q96Q06 1357 aa13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 SMIM22K7EJ46 135 aa13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 HSPD1P10809 573 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 CDK8P49336 464 aa13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 MOGSQ13724 837 aa13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 TMEM179Q6ZVK1 233 aa13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 ANKRD23Q86SG2 305 aa13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 CCDC17Q96LX7 622 aa13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 ZSWIM8A7E2V4 1837 aa13.97□□□□□ -0.17
TRAFD1-209ENST00000552896 RLFQ13129 1914 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 MINDY4BA8MYZ0 360 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 BTBD19C9JJ37 291 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 CHMLP26374 656 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 PPARAQ07869 468 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 NOM1Q5C9Z4 860 aaKnown RBP13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 FASTKD5Q7L8L6 764 aaKnown RBP13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 SKAP1Q86WV1 359 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 FAM43AQ8N2R8 423 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 PROCA1Q8NCQ7 364 aaPredicted RBP13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 RUFY2Q8WXA3 655 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 ZNF287Q9HBT7 754 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms